RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 HIGD1CA8MV81 97 aa20.49■□□□□ 0.87
FANCA-221ENST00000566889 IDI2-AS1Q9NZ38 188 aa20.49■□□□□ 0.87
FANCA-221ENST00000566889 SP9P0CG40 484 aa20.49■□□□□ 0.87
FANCA-221ENST00000566889 S100A7P31151 101 aa20.49■□□□□ 0.87
FANCA-221ENST00000566889 CAMPP49913 170 aa20.49■□□□□ 0.87
FANCA-221ENST00000566889 SEC11AP67812 179 aa20.49■□□□□ 0.87
FANCA-221ENST00000566889 FAM234AQ9H0X4 552 aa20.49■□□□□ 0.87
FANCA-221ENST00000566889 ZNF835Q9Y2P0 537 aa20.49■□□□□ 0.87
FANCA-221ENST00000566889 AMMECR1Q9Y4X0 333 aaPredicted RBP20.49■□□□□ 0.87
FANCA-221ENST00000566889 TET2Q6N021 2002 aaPredicted RBP20.48■□□□□ 0.87
FANCA-221ENST00000566889 GPR183P32249 361 aa20.48■□□□□ 0.87
FANCA-221ENST00000566889 MAP1LC3CQ9BXW4 147 aa20.48■□□□□ 0.87
FANCA-221ENST00000566889 GNG12Q9UBI6 72 aa20.48■□□□□ 0.87
FANCA-221ENST00000566889 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.47■□□□□ 0.87
FANCA-221ENST00000566889 GAGE10A6NGK3 116 aa20.47■□□□□ 0.87
FANCA-221ENST00000566889 LIPFP07098 398 aa20.47■□□□□ 0.87
FANCA-221ENST00000566889 GTF2H5Q6ZYL4 71 aa20.47■□□□□ 0.87
FANCA-221ENST00000566889 TPRX1Q8N7U7 411 aa20.47■□□□□ 0.87
FANCA-221ENST00000566889 SOX21Q9Y651 276 aaPredicted RBP20.47■□□□□ 0.87
FANCA-221ENST00000566889 ATP5IP56385 69 aaPredicted RBP20.47■□□□□ 0.87
FANCA-221ENST00000566889 HBBP68871 147 aa20.47■□□□□ 0.87
FANCA-221ENST00000566889 FAM90A1Q86YD7 464 aa20.47■□□□□ 0.87
FANCA-221ENST00000566889 DUSP3P51452 185 aaPredicted RBP20.46■□□□□ 0.87
FANCA-221ENST00000566889 C11orf53Q8IXP5 236 aa20.46■□□□□ 0.87
FANCA-221ENST00000566889 FER1L6-AS1Q8NA97 138 aa20.46■□□□□ 0.87
FANCA-221ENST00000566889 DDB2Q92466 427 aa20.46■□□□□ 0.87
FANCA-221ENST00000566889 RPH3ALQ9UNE2 315 aa20.46■□□□□ 0.87
FANCA-221ENST00000566889 MYO9BQ13459 2157 aa20.46■□□□□ 0.87
FANCA-221ENST00000566889 C7orf71A4D174 169 aa20.46■□□□□ 0.87
FANCA-221ENST00000566889 UBE2L3P68036 154 aaKnown RBP20.46■□□□□ 0.87
FANCA-221ENST00000566889 Q0VFX4 171 aa20.46■□□□□ 0.87
FANCA-221ENST00000566889 ALKBH6Q3KRA9 238 aa20.46■□□□□ 0.87
FANCA-221ENST00000566889 SSX8Q7RTT4 187 aa20.46■□□□□ 0.87
FANCA-221ENST00000566889 SH2D7A6NKC9 451 aaPredicted RBP20.45■□□□□ 0.86
FANCA-221ENST00000566889 LTC4SQ16873 150 aa20.45■□□□□ 0.86
FANCA-221ENST00000566889 RPL39P5Q59GN2 51 aa20.45■□□□□ 0.86
FANCA-221ENST00000566889 OBP2BQ9NPH6 170 aa20.45■□□□□ 0.86
FANCA-221ENST00000566889 B4GALT7Q9UBV7 327 aa20.45■□□□□ 0.86
FANCA-221ENST00000566889 LOXL2Q9Y4K0 774 aa20.45■□□□□ 0.86
FANCA-221ENST00000566889 PEX7O00628 323 aa20.45■□□□□ 0.86
FANCA-221ENST00000566889 PAX2Q02962 417 aa20.45■□□□□ 0.86
FANCA-221ENST00000566889 UFSP1Q6NVU6 142 aa20.45■□□□□ 0.86
FANCA-221ENST00000566889 ZNF826PQ6ZT77 177 aa20.45■□□□□ 0.86
FANCA-221ENST00000566889 LINC00479Q96M42 142 aa20.45■□□□□ 0.86
FANCA-221ENST00000566889 LAMA1P25391 3075 aa20.44■□□□□ 0.86
FANCA-221ENST00000566889 A0A087X0K7 114 aa20.44■□□□□ 0.86
FANCA-221ENST00000566889 G3V4G9 280 aa20.44■□□□□ 0.86
FANCA-221ENST00000566889 LINC00173Q6ZV60 143 aa20.44■□□□□ 0.86
FANCA-221ENST00000566889 H1FXQ92522 213 aaKnown RBP20.44■□□□□ 0.86
FANCA-221ENST00000566889 IGKV1OR2-108A0A075B7D4 117 aa20.43■□□□□ 0.86
FANCA-221ENST00000566889 SMIM21Q3B7S5 101 aa20.43■□□□□ 0.86
FANCA-221ENST00000566889 FAM167A-AS1Q96KT0 104 aa20.43■□□□□ 0.86
FANCA-221ENST00000566889 METRNQ9UJH8 293 aa20.43■□□□□ 0.86
FANCA-221ENST00000566889 HSPB8Q9UJY1 196 aa20.43■□□□□ 0.86
FANCA-221ENST00000566889 LOC102724200A0A096LPH7 203 aaPredicted RBP20.43■□□□□ 0.86
FANCA-221ENST00000566889 COX8AP10176 69 aa20.43■□□□□ 0.86
FANCA-221ENST00000566889 SARAFQ96BY9 339 aa20.43■□□□□ 0.86
FANCA-221ENST00000566889 FAM173AQ9BQD7 235 aa20.43■□□□□ 0.86
FANCA-221ENST00000566889 SLC25A2Q9BXI2 301 aa20.43■□□□□ 0.86
FANCA-221ENST00000566889 CXXC4Q9H2H0 198 aa20.43■□□□□ 0.86
FANCA-221ENST00000566889 C7orf69Q9H7B7 122 aa20.43■□□□□ 0.86
FANCA-221ENST00000566889 SPEGQ15772 3267 aa20.43■□□□□ 0.86
FANCA-221ENST00000566889 SRFP11831 508 aa20.42■□□□□ 0.86
FANCA-221ENST00000566889 DCTN5Q9BTE1 182 aa20.42■□□□□ 0.86
FANCA-221ENST00000566889 IFI27L2Q9H2X8 130 aa20.42■□□□□ 0.86
FANCA-221ENST00000566889 VWC2LB2RUY7 222 aa20.42■□□□□ 0.86
FANCA-221ENST00000566889 SAP30O75446 220 aa20.42■□□□□ 0.86
FANCA-221ENST00000566889 RIPPLY3P57055 190 aa20.42■□□□□ 0.86
FANCA-221ENST00000566889 CLEC2AQ6UVW9 174 aa20.42■□□□□ 0.86
FANCA-221ENST00000566889 PPP1R32Q7Z5V6 425 aa20.42■□□□□ 0.86
FANCA-221ENST00000566889 ZNF329Q86UD4 541 aa20.42■□□□□ 0.86
FANCA-221ENST00000566889 CXorf67Q86X51 503 aaPredicted RBP20.42■□□□□ 0.86
FANCA-221ENST00000566889 PRNDQ9UKY0 176 aa20.42■□□□□ 0.86
FANCA-221ENST00000566889 OR51B2Q9Y5P1 312 aa20.42■□□□□ 0.86
FANCA-221ENST00000566889 WDR82Q6UXN9 313 aa20.41■□□□□ 0.86
FANCA-221ENST00000566889 BPIFA4PQ86YQ2 179 aa20.41■□□□□ 0.86
FANCA-221ENST00000566889 ZNF430Q9H8G1 570 aaPredicted RBP20.41■□□□□ 0.86
FANCA-221ENST00000566889 ZNF257Q9Y2Q1 563 aa20.41■□□□□ 0.86
FANCA-221ENST00000566889 TFF1P04155 84 aa20.41■□□□□ 0.86
FANCA-221ENST00000566889 APOBEC3AP31941 199 aaPredicted RBP20.41■□□□□ 0.86
FANCA-221ENST00000566889 OR1B1Q8NGR6 318 aa20.41■□□□□ 0.86
FANCA-221ENST00000566889 CELA3AP09093 270 aa20.4■□□□□ 0.86
FANCA-221ENST00000566889 CT83Q5H943 113 aa20.4■□□□□ 0.86
FANCA-221ENST00000566889 ASPHD1Q5U4P2 390 aa20.4■□□□□ 0.86
FANCA-221ENST00000566889 ZNF841Q6ZN19 808 aa20.4■□□□□ 0.86
FANCA-221ENST00000566889 AP1S3Q96PC3 154 aa20.4■□□□□ 0.86
FANCA-221ENST00000566889 NDFIP1Q9BT67 221 aa20.4■□□□□ 0.86
FANCA-221ENST00000566889 HTR1DP28221 377 aa20.39■□□□□ 0.86
FANCA-221ENST00000566889 PRCDQ00LT1 54 aa20.39■□□□□ 0.86
FANCA-221ENST00000566889 POU2AF1Q16633 256 aa20.39■□□□□ 0.86
FANCA-221ENST00000566889 CR1LQ2VPA4 569 aa20.39■□□□□ 0.86
FANCA-221ENST00000566889 C2orf83Q53S99 150 aa20.39■□□□□ 0.86
FANCA-221ENST00000566889 TMEM97Q5BJF2 176 aa20.39■□□□□ 0.86
FANCA-221ENST00000566889 LINC01545Q5VT33 79 aa20.39■□□□□ 0.86
FANCA-221ENST00000566889 PLPPR2Q96GM1 343 aa20.39■□□□□ 0.86
FANCA-221ENST00000566889 HINT2Q9BX68 163 aa20.39■□□□□ 0.86
FANCA-221ENST00000566889 PSMB11A5LHX3 300 aa20.39■□□□□ 0.85
FANCA-221ENST00000566889 FAM231BA6NCW3 169 aa20.39■□□□□ 0.85
FANCA-221ENST00000566889 CER1O95813 267 aa20.39■□□□□ 0.85
FANCA-221ENST00000566889 FOXA3P55318 350 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms