RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 IGHV3-48P01763 117 aa14.6□□□□□ -0.07
CCDC113-204ENST00000566498 HOXA1P49639 335 aaPredicted RBP14.6□□□□□ -0.07
CCDC113-204ENST00000566498 KLF9Q13886 244 aaPredicted RBP14.6□□□□□ -0.07
CCDC113-204ENST00000566498 ZNF57Q68EA5 555 aaPredicted RBP14.6□□□□□ -0.07
CCDC113-204ENST00000566498 Q6ZRM9 215 aa14.6□□□□□ -0.07
CCDC113-204ENST00000566498 CCDC190Q86UF4 302 aa14.6□□□□□ -0.07
CCDC113-204ENST00000566498 FAM219AQ8IW50 185 aa14.6□□□□□ -0.07
CCDC113-204ENST00000566498 ZNF114Q8NC26 417 aa14.6□□□□□ -0.07
CCDC113-204ENST00000566498 LHFPL5Q8TAF8 219 aa14.6□□□□□ -0.07
CCDC113-204ENST00000566498 ATP6V0BQ99437 205 aa14.6□□□□□ -0.07
CCDC113-204ENST00000566498 CHRDL1Q9BU40 450 aa14.6□□□□□ -0.07
CCDC113-204ENST00000566498 ZNF436Q9C0F3 470 aaPredicted RBP14.6□□□□□ -0.07
CCDC113-204ENST00000566498 ZNF785A8K8V0 405 aa14.59□□□□□ -0.07
CCDC113-204ENST00000566498 A8MWP6 167 aa14.59□□□□□ -0.07
CCDC113-204ENST00000566498 I3L2K1 104 aa14.59□□□□□ -0.07
CCDC113-204ENST00000566498 NUPL2O15504 423 aaKnown RBP14.59□□□□□ -0.07
CCDC113-204ENST00000566498 MT-CO2P00403 227 aa14.59□□□□□ -0.07
CCDC113-204ENST00000566498 ZNF79Q15937 498 aa14.59□□□□□ -0.07
CCDC113-204ENST00000566498 MARC2Q969Z3 335 aa14.59□□□□□ -0.07
CCDC113-204ENST00000566498 GPR146Q96CH1 333 aa14.59□□□□□ -0.07
CCDC113-204ENST00000566498 C20orf24Q9BUV8 137 aa14.59□□□□□ -0.07
CCDC113-204ENST00000566498 MRPL27Q9P0M9 148 aaKnown RBP14.59□□□□□ -0.07
CCDC113-204ENST00000566498 MLXQ9UH92 298 aa14.59□□□□□ -0.07
CCDC113-204ENST00000566498 DNAH9Q9NYC9 4486 aa14.58□□□□□ -0.07
CCDC113-204ENST00000566498 ELLP55199 621 aaPredicted RBP14.58□□□□□ -0.08
CCDC113-204ENST00000566498 CD81P60033 236 aa14.58□□□□□ -0.08
CCDC113-204ENST00000566498 SPCS3P61009 180 aa14.58□□□□□ -0.08
CCDC113-204ENST00000566498 TRIM63Q969Q1 353 aa14.58□□□□□ -0.08
CCDC113-204ENST00000566498 TMEM230Q96A57 120 aa14.58□□□□□ -0.08
CCDC113-204ENST00000566498 WDR89Q96FK6 387 aaPredicted RBP14.58□□□□□ -0.08
CCDC113-204ENST00000566498 TXN2Q99757 166 aa14.58□□□□□ -0.08
CCDC113-204ENST00000566498 NEURL2Q9BR09 285 aa14.58□□□□□ -0.08
CCDC113-204ENST00000566498 PRR13Q9NZ81 148 aa14.58□□□□□ -0.08
CCDC113-204ENST00000566498 TMEM56-RWDD3S4R434 201 aa14.58□□□□□ -0.08
CCDC113-204ENST00000566498 IGHV3OR16-8A0A075B7F1 116 aa14.57□□□□□ -0.08
CCDC113-204ENST00000566498 F8W735 103 aaPredicted RBP14.57□□□□□ -0.08
CCDC113-204ENST00000566498 NDUFA4O00483 81 aa14.57□□□□□ -0.08
CCDC113-204ENST00000566498 CTSGP08311 255 aa14.57□□□□□ -0.08
CCDC113-204ENST00000566498 ANXA3P12429 323 aa14.57□□□□□ -0.08
CCDC113-204ENST00000566498 ADMP35318 185 aa14.57□□□□□ -0.08
CCDC113-204ENST00000566498 INPP1P49441 399 aa14.57□□□□□ -0.08
CCDC113-204ENST00000566498 TMEM187Q14656 261 aa14.57□□□□□ -0.08
CCDC113-204ENST00000566498 BTNL8Q6UX41 500 aa14.57□□□□□ -0.08
CCDC113-204ENST00000566498 RBPMS2Q6ZRY4 209 aaKnown RBP14.57□□□□□ -0.08
CCDC113-204ENST00000566498 TMED4Q7Z7H5 227 aa14.57□□□□□ -0.08
CCDC113-204ENST00000566498 GALNT14Q96FL9 552 aa14.57□□□□□ -0.08
CCDC113-204ENST00000566498 WWC2-AS2Q96NR7 200 aa14.57□□□□□ -0.08
CCDC113-204ENST00000566498 ZMAT4Q9H898 229 aa14.57□□□□□ -0.08
CCDC113-204ENST00000566498 C19orf73Q9NVV2 129 aa14.57□□□□□ -0.08
CCDC113-204ENST00000566498 CACNG5Q9UF02 275 aa14.57□□□□□ -0.08
CCDC113-204ENST00000566498 A8MZ25 164 aa14.56□□□□□ -0.08
CCDC113-204ENST00000566498 INS-IGF2F8WCM5 200 aa14.56□□□□□ -0.08
CCDC113-204ENST00000566498 GNG7O60262 68 aa14.56□□□□□ -0.08
CCDC113-204ENST00000566498 YIF1AO95070 293 aa14.56□□□□□ -0.08
CCDC113-204ENST00000566498 SCAF4O95104 1147 aaKnown RBP14.56□□□□□ -0.08
CCDC113-204ENST00000566498 C8orf88P0DMB2 117 aa14.56□□□□□ -0.08
CCDC113-204ENST00000566498 RELQ04864 619 aaPredicted RBP14.56□□□□□ -0.08
CCDC113-204ENST00000566498 DUSP18Q8NEJ0 188 aa14.56□□□□□ -0.08
CCDC113-204ENST00000566498 TMEM190Q8WZ59 177 aa14.56□□□□□ -0.08
CCDC113-204ENST00000566498 HEYLQ9NQ87 328 aaPredicted RBP14.56□□□□□ -0.08
CCDC113-204ENST00000566498 NDUFA13Q9P0J0 144 aa14.56□□□□□ -0.08
CCDC113-204ENST00000566498 CEBPZOSA8MTT3 80 aa14.55□□□□□ -0.08
CCDC113-204ENST00000566498 ZNF207O43670 478 aaKnown RBP14.55□□□□□ -0.08
CCDC113-204ENST00000566498 CD7P09564 240 aa14.55□□□□□ -0.08
CCDC113-204ENST00000566498 TMEM61Q8N0U2 210 aa14.55□□□□□ -0.08
CCDC113-204ENST00000566498 OR52E5Q8NH55 327 aa14.55□□□□□ -0.08
CCDC113-204ENST00000566498 IL22RA2Q969J5 263 aa14.55□□□□□ -0.08
CCDC113-204ENST00000566498 DAZ1Q9NQZ3 744 aaKnown RBP14.55□□□□□ -0.08
CCDC113-204ENST00000566498 OR11H12B2RN74 326 aa14.54□□□□□ -0.08
CCDC113-204ENST00000566498 CORTO00230 105 aa14.54□□□□□ -0.08
CCDC113-204ENST00000566498 NXPH3O95157 252 aa14.54□□□□□ -0.08
CCDC113-204ENST00000566498 SULT1A3P0DMM9 295 aa14.54□□□□□ -0.08
CCDC113-204ENST00000566498 SULT1A4P0DMN0 295 aa14.54□□□□□ -0.08
CCDC113-204ENST00000566498 RNASE2P10153 161 aaKnown RBP14.54□□□□□ -0.08
CCDC113-204ENST00000566498 NPBWR1P48145 328 aa14.54□□□□□ -0.08
CCDC113-204ENST00000566498 SUPT4H1P63272 117 aaKnown RBP14.54□□□□□ -0.08
CCDC113-204ENST00000566498 ANKRD55Q3KP44 614 aa14.54□□□□□ -0.08
CCDC113-204ENST00000566498 SLC16A13Q7RTY0 426 aa14.54□□□□□ -0.08
CCDC113-204ENST00000566498 LYZL2Q7Z4W2 148 aa14.54□□□□□ -0.08
CCDC113-204ENST00000566498 LGI3Q8N145 548 aa14.54□□□□□ -0.08
CCDC113-204ENST00000566498 OR52B4Q8NGK2 314 aa14.54□□□□□ -0.08
CCDC113-204ENST00000566498 DEDD2Q8WXF8 326 aa14.54□□□□□ -0.08
CCDC113-204ENST00000566498 SLC25A21Q9BQT8 299 aaPredicted RBP14.54□□□□□ -0.08
CCDC113-204ENST00000566498 K7EMT4 169 aa14.53□□□□□ -0.08
CCDC113-204ENST00000566498 FCGR2BP31994 310 aaPredicted RBP14.53□□□□□ -0.08
CCDC113-204ENST00000566498 HTR2BP41595 481 aa14.53□□□□□ -0.08
CCDC113-204ENST00000566498 TMEM128Q5BJH2 165 aa14.53□□□□□ -0.08
CCDC113-204ENST00000566498 DEFB125Q8N687 156 aa14.53□□□□□ -0.08
CCDC113-204ENST00000566498 RCHY1Q96PM5 261 aa14.53□□□□□ -0.08
CCDC113-204ENST00000566498 SRRQ9GZT4 340 aa14.53□□□□□ -0.08
CCDC113-204ENST00000566498 CACFD1Q9UGQ2 172 aa14.53□□□□□ -0.08
CCDC113-204ENST00000566498 TRAV25A0A0B4J276 109 aa14.52□□□□□ -0.09
CCDC113-204ENST00000566498 A0A0B4J2A0 478 aa14.52□□□□□ -0.09
CCDC113-204ENST00000566498 C15orf62A8K5M9 175 aa14.52□□□□□ -0.09
CCDC113-204ENST00000566498 VAMP1P23763 118 aa14.52□□□□□ -0.09
CCDC113-204ENST00000566498 OPRK1P41145 380 aa14.52□□□□□ -0.09
CCDC113-204ENST00000566498 SRPXP78539 464 aa14.52□□□□□ -0.09
CCDC113-204ENST00000566498 MLANAQ16655 118 aa14.52□□□□□ -0.09
CCDC113-204ENST00000566498 AARDQ4LEZ3 155 aa14.52□□□□□ -0.09
CCDC113-204ENST00000566498 TRIQKQ629K1 86 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms