RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 ST8SIA3O43173 380 aa10.93□□□□□ -0.66
FANCA-220ENST00000566409 FCGR2BP31994 310 aaPredicted RBP10.93□□□□□ -0.66
FANCA-220ENST00000566409 MRPS10P82664 201 aaKnown RBP10.93□□□□□ -0.66
FANCA-220ENST00000566409 PVRIGQ6DKI7 326 aa10.93□□□□□ -0.66
FANCA-220ENST00000566409 SLC16A13Q7RTY0 426 aa10.93□□□□□ -0.66
FANCA-220ENST00000566409 OR4C16Q8NGL9 310 aa10.93□□□□□ -0.66
FANCA-220ENST00000566409 LHFPL5Q8TAF8 219 aa10.93□□□□□ -0.66
FANCA-220ENST00000566409 DIRAS2Q96HU8 199 aa10.93□□□□□ -0.66
FANCA-220ENST00000566409 BCL7BQ9BQE9 202 aa10.93□□□□□ -0.66
FANCA-220ENST00000566409 C20orf24Q9BUV8 137 aa10.93□□□□□ -0.66
FANCA-220ENST00000566409 RYR2Q92736 4967 aa10.92□□□□□ -0.66
FANCA-220ENST00000566409 INS-IGF2F8WCM5 200 aa10.92□□□□□ -0.66
FANCA-220ENST00000566409 H3BMQ9 156 aa10.92□□□□□ -0.66
FANCA-220ENST00000566409 K7EMT4 169 aa10.92□□□□□ -0.66
FANCA-220ENST00000566409 ETV6P41212 452 aa10.92□□□□□ -0.66
FANCA-220ENST00000566409 RPL5P46777 297 aaKnown RBP10.92□□□□□ -0.66
FANCA-220ENST00000566409 AKR1C2P52895 323 aa10.92□□□□□ -0.66
FANCA-220ENST00000566409 MFAP4P55083 255 aa10.92□□□□□ -0.66
FANCA-220ENST00000566409 IL18Q14116 193 aa10.92□□□□□ -0.66
FANCA-220ENST00000566409 MEF2DQ14814 521 aa10.92□□□□□ -0.66
FANCA-220ENST00000566409 TRIM16LQ309B1 348 aa10.92□□□□□ -0.66
FANCA-220ENST00000566409 ZFAND6Q6FIF0 208 aa10.92□□□□□ -0.66
FANCA-220ENST00000566409 RBPMS2Q6ZRY4 209 aaKnown RBP10.92□□□□□ -0.66
FANCA-220ENST00000566409 CCDC71LQ8N9Z2 235 aa10.92□□□□□ -0.66
FANCA-220ENST00000566409 GLYATL2Q8WU03 294 aa10.92□□□□□ -0.66
FANCA-220ENST00000566409 ISOC1Q96CN7 298 aa10.92□□□□□ -0.66
FANCA-220ENST00000566409 SOSTQ9BQB4 213 aa10.92□□□□□ -0.66
FANCA-220ENST00000566409 TMEM222Q9H0R3 208 aa10.92□□□□□ -0.66
FANCA-220ENST00000566409 GAR1Q9NY12 217 aaKnown RBP10.92□□□□□ -0.66
FANCA-220ENST00000566409 C15orf62A8K5M9 175 aa10.91□□□□□ -0.66
FANCA-220ENST00000566409 TSPAN4O14817 238 aa10.91□□□□□ -0.66
FANCA-220ENST00000566409 CDS2O95674 445 aa10.91□□□□□ -0.66
FANCA-220ENST00000566409 OR5AC1P0C628 307 aa10.91□□□□□ -0.66
FANCA-220ENST00000566409 ERHP84090 104 aaKnown RBP10.91□□□□□ -0.66
FANCA-220ENST00000566409 ANKRD55Q3KP44 614 aa10.91□□□□□ -0.66
FANCA-220ENST00000566409 PINX1Q96BK5 328 aaKnown RBP10.91□□□□□ -0.66
FANCA-220ENST00000566409 TXN2Q99757 166 aa10.91□□□□□ -0.66
FANCA-220ENST00000566409 SPAG8Q99932 426 aaPredicted RBP10.91□□□□□ -0.66
FANCA-220ENST00000566409 NXF2Q9GZY0 626 aaKnown RBP10.91□□□□□ -0.66
FANCA-220ENST00000566409 SMPXQ9UHP9 88 aa10.91□□□□□ -0.66
FANCA-220ENST00000566409 GPR132Q9UNW8 380 aa10.91□□□□□ -0.66
FANCA-220ENST00000566409 TEX13DA0A0J9YY54 714 aaPredicted RBP10.9□□□□□ -0.66
FANCA-220ENST00000566409 GSTZ1O43708 216 aaPredicted RBP10.9□□□□□ -0.66
FANCA-220ENST00000566409 AKAIN1P0CW23 69 aa10.9□□□□□ -0.66
FANCA-220ENST00000566409 RNASE2P10153 161 aaKnown RBP10.9□□□□□ -0.66
FANCA-220ENST00000566409 TNFSF8P32971 234 aa10.9□□□□□ -0.66
FANCA-220ENST00000566409 AARDQ4LEZ3 155 aa10.9□□□□□ -0.66
FANCA-220ENST00000566409 OR51S1Q8NGJ8 323 aa10.9□□□□□ -0.66
FANCA-220ENST00000566409 OR10C1Q96KK4 312 aa10.9□□□□□ -0.66
FANCA-220ENST00000566409 RNF2Q99496 336 aa10.9□□□□□ -0.66
FANCA-220ENST00000566409 C6orf62Q9GZU0 229 aaPredicted RBP10.9□□□□□ -0.66
FANCA-220ENST00000566409 NAA60Q9H7X0 242 aa10.9□□□□□ -0.66
FANCA-220ENST00000566409 MRPL36Q9P0J6 103 aaKnown RBP10.9□□□□□ -0.66
FANCA-220ENST00000566409 UBQLN2Q9UHD9 624 aa10.9□□□□□ -0.66
FANCA-220ENST00000566409 IGHV3-49A0A0A0MS15 119 aa10.89□□□□□ -0.67
FANCA-220ENST00000566409 IGHV7-4-1A0A0J9YVY3 117 aa10.89□□□□□ -0.67
FANCA-220ENST00000566409 ANKRD20A5PA0PJZ0 165 aa10.89□□□□□ -0.67
FANCA-220ENST00000566409 DISC1C4P0D8 188 aa10.89□□□□□ -0.67
FANCA-220ENST00000566409 NUPL2O15504 423 aaKnown RBP10.89□□□□□ -0.67
FANCA-220ENST00000566409 B3GALNT1O75752 331 aa10.89□□□□□ -0.67
FANCA-220ENST00000566409 IFNA17P01571 189 aa10.89□□□□□ -0.67
FANCA-220ENST00000566409 SURF2Q15527 256 aaPredicted RBP10.89□□□□□ -0.67
FANCA-220ENST00000566409 MLANAQ16655 118 aa10.89□□□□□ -0.67
FANCA-220ENST00000566409 ODF3L2Q3SX64 289 aa10.89□□□□□ -0.67
FANCA-220ENST00000566409 SELENOHQ8IZQ5 122 aaKnown RBP10.89□□□□□ -0.67
FANCA-220ENST00000566409 SLC35G3Q8N808 338 aa10.89□□□□□ -0.67
FANCA-220ENST00000566409 FNDC4Q9H6D8 234 aaPredicted RBP10.89□□□□□ -0.67
FANCA-220ENST00000566409 RABL2AQ9UBK7 228 aaPredicted RBP10.89□□□□□ -0.67
FANCA-220ENST00000566409 RABL2BQ9UNT1 228 aa10.89□□□□□ -0.67
FANCA-220ENST00000566409 C14orf166Q9Y224 244 aaKnown RBP10.89□□□□□ -0.67
FANCA-220ENST00000566409 CRYM-AS1A6NIL9 109 aa10.88□□□□□ -0.67
FANCA-220ENST00000566409 CHEK1O14757 476 aa10.88□□□□□ -0.67
FANCA-220ENST00000566409 ATG12O94817 140 aa10.88□□□□□ -0.67
FANCA-220ENST00000566409 YIF1AO95070 293 aa10.88□□□□□ -0.67
FANCA-220ENST00000566409 SNCAP37840 140 aa10.88□□□□□ -0.67
FANCA-220ENST00000566409 RELQ04864 619 aaPredicted RBP10.88□□□□□ -0.67
FANCA-220ENST00000566409 BSXQ3C1V8 233 aa10.88□□□□□ -0.67
FANCA-220ENST00000566409 LAMTOR1Q6IAA8 161 aa10.88□□□□□ -0.67
FANCA-220ENST00000566409 TOMM20LQ6UXN7 152 aa10.88□□□□□ -0.67
FANCA-220ENST00000566409 LILRB2Q8N423 598 aa10.88□□□□□ -0.67
FANCA-220ENST00000566409 TMEM116Q8NCL8 245 aa10.88□□□□□ -0.67
FANCA-220ENST00000566409 TMEM230Q96A57 120 aa10.88□□□□□ -0.67
FANCA-220ENST00000566409 GPR146Q96CH1 333 aa10.88□□□□□ -0.67
FANCA-220ENST00000566409 RRNAD1Q96FB5 475 aaKnown RBP10.88□□□□□ -0.67
FANCA-220ENST00000566409 RHPN1-AS1Q9BWJ2 59 aa10.88□□□□□ -0.67
FANCA-220ENST00000566409 GGTLC1Q9BX51 225 aa10.88□□□□□ -0.67
FANCA-220ENST00000566409 IGHV3OR16-13A0A075B7E8 117 aa10.87□□□□□ -0.67
FANCA-220ENST00000566409 LOC102724200A0A096LPH7 203 aaPredicted RBP10.87□□□□□ -0.67
FANCA-220ENST00000566409 IGHV3-74A0A0B4J1X5 117 aa10.87□□□□□ -0.67
FANCA-220ENST00000566409 GNG7O60262 68 aa10.87□□□□□ -0.67
FANCA-220ENST00000566409 TMEM50AO95807 157 aa10.87□□□□□ -0.67
FANCA-220ENST00000566409 APOHP02749 345 aaPredicted RBP10.87□□□□□ -0.67
FANCA-220ENST00000566409 FAM90A2PQ658T7 463 aa10.87□□□□□ -0.67
FANCA-220ENST00000566409 MCFD2Q8NI22 146 aa10.87□□□□□ -0.67
FANCA-220ENST00000566409 RBPMSQ93062 196 aaKnown RBP10.87□□□□□ -0.67
FANCA-220ENST00000566409 PRRT1Q99946 306 aa10.87□□□□□ -0.67
FANCA-220ENST00000566409 OVOL2Q9BRP0 275 aa10.87□□□□□ -0.67
FANCA-220ENST00000566409 ZFAND3Q9H8U3 227 aa10.87□□□□□ -0.67
FANCA-220ENST00000566409 PRR13Q9NZ81 148 aa10.87□□□□□ -0.67
FANCA-220ENST00000566409 RSL24D1Q9UHA3 163 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms