RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 SFXN3Q9BWM7 321 aa12.62□□□□□ -0.39
GTF3C1-205ENST00000564747 SAMD10Q9BYL1 202 aa12.62□□□□□ -0.39
GTF3C1-205ENST00000564747 ZNF257Q9Y2Q1 563 aa12.62□□□□□ -0.39
GTF3C1-205ENST00000564747 DCHS1Q96JQ0 3298 aa12.61□□□□□ -0.39
GTF3C1-205ENST00000564747 ESDP10768 282 aa12.61□□□□□ -0.39
GTF3C1-205ENST00000564747 CDKN1AP38936 164 aa12.61□□□□□ -0.39
GTF3C1-205ENST00000564747 ZNF788Q6ZQV5 615 aa12.61□□□□□ -0.39
GTF3C1-205ENST00000564747 PIP4P1Q86T03 277 aa12.61□□□□□ -0.39
GTF3C1-205ENST00000564747 TMEM167BQ9NRX6 74 aa12.61□□□□□ -0.39
GTF3C1-205ENST00000564747 PPP1R14DQ9NXH3 145 aa12.61□□□□□ -0.39
GTF3C1-205ENST00000564747 TECRQ9NZ01 308 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-205ENST00000564747 RPUSD1Q9UJJ7 312 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-205ENST00000564747 CEP250Q9BV73 2442 aa12.61□□□□□ -0.39
GTF3C1-205ENST00000564747 ROS1P08922 2347 aa12.61□□□□□ -0.39
GTF3C1-205ENST00000564747 GGTLC3B5MD39 225 aa12.61□□□□□ -0.39
GTF3C1-205ENST00000564747 SUMO1P63165 101 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-205ENST00000564747 FXYD3Q14802 87 aa12.61□□□□□ -0.39
GTF3C1-205ENST00000564747 RTL8BQ17RB0 113 aa12.61□□□□□ -0.39
GTF3C1-205ENST00000564747 SAA1P0DJI8 122 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-205ENST00000564747 SLC35B1P78383 322 aa12.6□□□□□ -0.39
GTF3C1-205ENST00000564747 FAM27E3Q08E93 113 aa12.6□□□□□ -0.39
GTF3C1-205ENST00000564747 DYSFO75923 2080 aa12.6□□□□□ -0.39
GTF3C1-205ENST00000564747 GAGE1Q13065 139 aa12.6□□□□□ -0.39
GTF3C1-205ENST00000564747 BATFQ16520 125 aa12.6□□□□□ -0.39
GTF3C1-205ENST00000564747 ZADH2Q8N4Q0 377 aa12.6□□□□□ -0.39
GTF3C1-205ENST00000564747 NPSP0C0P6 89 aa12.59□□□□□ -0.39
GTF3C1-205ENST00000564747 RNASE2P10153 161 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-205ENST00000564747 SELENOVP59797 346 aa12.59□□□□□ -0.39
GTF3C1-205ENST00000564747 LINC00574Q9H8X3 128 aa12.59□□□□□ -0.39
GTF3C1-205ENST00000564747 DMXL2Q8TDJ6 3036 aa12.59□□□□□ -0.39
GTF3C1-205ENST00000564747 BRS3P32247 399 aa12.59□□□□□ -0.39
GTF3C1-205ENST00000564747 TCL1AP56279 114 aa12.59□□□□□ -0.39
GTF3C1-205ENST00000564747 C2orf83Q53S99 150 aa12.59□□□□□ -0.39
GTF3C1-205ENST00000564747 MORN5Q5VZ52 161 aa12.59□□□□□ -0.39
GTF3C1-205ENST00000564747 ARL2-SNX15V9GYD0 113 aa12.59□□□□□ -0.39
GTF3C1-205ENST00000564747 OTOGLQ3ZCN5 2332 aa12.59□□□□□ -0.39
GTF3C1-205ENST00000564747 ADGRG4Q8IZF6 3080 aa12.58□□□□□ -0.39
GTF3C1-205ENST00000564747 E7EUB6 86 aa12.58□□□□□ -0.39
GTF3C1-205ENST00000564747 CCL8P80075 99 aa12.58□□□□□ -0.39
GTF3C1-205ENST00000564747 OR2T6Q8NHC8 308 aa12.58□□□□□ -0.39
GTF3C1-205ENST00000564747 SLC35E1Q96K37 410 aa12.58□□□□□ -0.39
GTF3C1-205ENST00000564747 TRAV5A0A0B4J249 113 aa12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 OR5G3P0C626 314 aa12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 KIAA1644Q3SXP7 199 aa12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 TIGITQ495A1 244 aa12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 ASPHD1Q5U4P2 390 aa12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 ZCCHC24Q8N2G6 241 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 SLC25A33Q9BSK2 321 aa12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 GNB1LQ9BYB4 327 aa12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 LPAR2Q9HBW0 351 aa12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 NAT8BQ9UHF3 227 aa12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 KALRNO60229 2985 aa12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 TM4SF5O14894 197 aa12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 IGLV2-8P01709 118 aa12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 REG1BP48304 166 aa12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 CX3CL1P78423 397 aa12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 CD69Q07108 199 aa12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 SIGLECL1Q8N7X8 197 aa12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 MRPL20Q9BYC9 149 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 GNB4Q9HAV0 340 aa12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 BET1LQ9NYM9 111 aa12.58□□□□□ -0.4
GTF3C1-205ENST00000564747 CEACAM4O75871 244 aa12.57□□□□□ -0.4
GTF3C1-205ENST00000564747 MGST1P10620 155 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-205ENST00000564747 CHRNB4P30926 498 aa12.57□□□□□ -0.4
GTF3C1-205ENST00000564747 Q0VG73 95 aa12.57□□□□□ -0.4
GTF3C1-205ENST00000564747 OR5B3Q8NH48 314 aa12.57□□□□□ -0.4
GTF3C1-205ENST00000564747 CRYABP02511 175 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-205ENST00000564747 C8orf88P0DMB2 117 aa12.57□□□□□ -0.4
GTF3C1-205ENST00000564747 TAS2R45P59539 299 aa12.57□□□□□ -0.4
GTF3C1-205ENST00000564747 RELQ04864 619 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-205ENST00000564747 NHLRC2Q8NBF2 726 aa12.57□□□□□ -0.4
GTF3C1-205ENST00000564747 OR1L8Q8NGR8 309 aa12.57□□□□□ -0.4
GTF3C1-205ENST00000564747 LINC00479Q96M42 142 aa12.57□□□□□ -0.4
GTF3C1-205ENST00000564747 HARBI1Q96MB7 349 aa12.57□□□□□ -0.4
GTF3C1-205ENST00000564747 FAM103A1Q9BTL3 118 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-205ENST00000564747 OSTCQ9NRP0 149 aa12.57□□□□□ -0.4
GTF3C1-205ENST00000564747 hADV38S2A0JD32 116 aa12.56□□□□□ -0.4
GTF3C1-205ENST00000564747 SFTPCP11686 197 aa12.56□□□□□ -0.4
GTF3C1-205ENST00000564747 CCL3L1P16619 93 aa12.56□□□□□ -0.4
GTF3C1-205ENST00000564747 TNFSF4P23510 183 aa12.56□□□□□ -0.4
GTF3C1-205ENST00000564747 CD40P25942 277 aa12.56□□□□□ -0.4
GTF3C1-205ENST00000564747 COMPP49747 757 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-205ENST00000564747 KRTDAPP60985 99 aa12.56□□□□□ -0.4
GTF3C1-205ENST00000564747 SSBP2P81877 361 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-205ENST00000564747 C3orf36Q3SXR2 165 aa12.56□□□□□ -0.4
GTF3C1-205ENST00000564747 ZNF586Q9NXT0 402 aa12.56□□□□□ -0.4
GTF3C1-205ENST00000564747 RNF114Q9Y508 228 aa12.56□□□□□ -0.4
GTF3C1-205ENST00000564747 IGHV3-48P01763 117 aa12.56□□□□□ -0.4
GTF3C1-205ENST00000564747 LINC00614P0C842 121 aa12.56□□□□□ -0.4
GTF3C1-205ENST00000564747 C1orf185Q5T7R7 199 aa12.56□□□□□ -0.4
GTF3C1-205ENST00000564747 ZNF833PQ6ZTB9 187 aa12.56□□□□□ -0.4
GTF3C1-205ENST00000564747 COMMD5Q9GZQ3 224 aa12.56□□□□□ -0.4
GTF3C1-205ENST00000564747 NDUFA4L2Q9NRX3 87 aa12.56□□□□□ -0.4
GTF3C1-205ENST00000564747 TRBV9A0A0B4J1U6 114 aa12.55□□□□□ -0.4
GTF3C1-205ENST00000564747 CA1P00915 261 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-205ENST00000564747 IBA57Q5T440 356 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-205ENST00000564747 MRPL54Q6P161 138 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-205ENST00000564747 TMEM136Q6ZRR5 245 aa12.55□□□□□ -0.4
GTF3C1-205ENST00000564747 PNKDQ8N490 385 aa12.55□□□□□ -0.4
GTF3C1-205ENST00000564747 OR4B1Q8NGF8 309 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms