RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 MARC2Q969Z3 335 aa13.87□□□□□ -0.19
SYNGR3-204ENST00000564642 PINX1Q96BK5 328 aaKnown RBP13.87□□□□□ -0.19
SYNGR3-204ENST00000564642 V9GYH0 126 aa13.87□□□□□ -0.19
SYNGR3-204ENST00000564642 A0A0G2JRQ6 117 aa13.86□□□□□ -0.19
SYNGR3-204ENST00000564642 A8MZ25 164 aa13.86□□□□□ -0.19
SYNGR3-204ENST00000564642 AKR1C4P17516 323 aa13.86□□□□□ -0.19
SYNGR3-204ENST00000564642 HOXA1P49639 335 aaPredicted RBP13.86□□□□□ -0.19
SYNGR3-204ENST00000564642 ELLP55199 621 aaPredicted RBP13.86□□□□□ -0.19
SYNGR3-204ENST00000564642 KLF9Q13886 244 aaPredicted RBP13.86□□□□□ -0.19
SYNGR3-204ENST00000564642 ZNF79Q15937 498 aa13.86□□□□□ -0.19
SYNGR3-204ENST00000564642 SPANXN2Q5MJ10 180 aa13.86□□□□□ -0.19
SYNGR3-204ENST00000564642 TMEM268Q5VZI3 342 aa13.86□□□□□ -0.19
SYNGR3-204ENST00000564642 CCDC190Q86UF4 302 aa13.86□□□□□ -0.19
SYNGR3-204ENST00000564642 LHFPL5Q8TAF8 219 aa13.86□□□□□ -0.19
SYNGR3-204ENST00000564642 TUBA4BQ9H853 241 aa13.86□□□□□ -0.19
SYNGR3-204ENST00000564642 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.86□□□□□ -0.19
SYNGR3-204ENST00000564642 MRPL27Q9P0M9 148 aaKnown RBP13.86□□□□□ -0.19
SYNGR3-204ENST00000564642 ZNF785A8K8V0 405 aa13.85□□□□□ -0.19
SYNGR3-204ENST00000564642 INS-IGF2F8WCM5 200 aa13.85□□□□□ -0.19
SYNGR3-204ENST00000564642 I3L2K1 104 aa13.85□□□□□ -0.19
SYNGR3-204ENST00000564642 NDUFA4O00483 81 aa13.85□□□□□ -0.19
SYNGR3-204ENST00000564642 NUPL2O15504 423 aaKnown RBP13.85□□□□□ -0.19
SYNGR3-204ENST00000564642 MT-CO2P00403 227 aa13.85□□□□□ -0.19
SYNGR3-204ENST00000564642 CD81P60033 236 aa13.85□□□□□ -0.19
SYNGR3-204ENST00000564642 Q6ZRM9 215 aa13.85□□□□□ -0.19
SYNGR3-204ENST00000564642 TRIM63Q969Q1 353 aa13.85□□□□□ -0.19
SYNGR3-204ENST00000564642 WWC2-AS2Q96NR7 200 aa13.85□□□□□ -0.19
SYNGR3-204ENST00000564642 TXN2Q99757 166 aa13.85□□□□□ -0.19
SYNGR3-204ENST00000564642 CHRDL1Q9BU40 450 aa13.85□□□□□ -0.19
SYNGR3-204ENST00000564642 ZMAT4Q9H898 229 aa13.85□□□□□ -0.19
SYNGR3-204ENST00000564642 C19orf73Q9NVV2 129 aa13.85□□□□□ -0.19
SYNGR3-204ENST00000564642 SELENOKQ9Y6D0 94 aa13.85□□□□□ -0.19
SYNGR3-204ENST00000564642 F8W735 103 aaPredicted RBP13.84□□□□□ -0.19
SYNGR3-204ENST00000564642 ANXA3P12429 323 aa13.84□□□□□ -0.19
SYNGR3-204ENST00000564642 SPCS3P61009 180 aa13.84□□□□□ -0.19
SYNGR3-204ENST00000564642 RELQ04864 619 aaPredicted RBP13.84□□□□□ -0.19
SYNGR3-204ENST00000564642 TMEM190Q8WZ59 177 aa13.84□□□□□ -0.19
SYNGR3-204ENST00000564642 TMEM230Q96A57 120 aa13.84□□□□□ -0.19
SYNGR3-204ENST00000564642 GPR146Q96CH1 333 aa13.84□□□□□ -0.19
SYNGR3-204ENST00000564642 WDR89Q96FK6 387 aaPredicted RBP13.84□□□□□ -0.19
SYNGR3-204ENST00000564642 GALNT14Q96FL9 552 aa13.84□□□□□ -0.19
SYNGR3-204ENST00000564642 NEURL2Q9BR09 285 aa13.84□□□□□ -0.19
SYNGR3-204ENST00000564642 C20orf24Q9BUV8 137 aa13.84□□□□□ -0.19
SYNGR3-204ENST00000564642 MLXQ9UH92 298 aa13.84□□□□□ -0.19
SYNGR3-204ENST00000564642 TMEM56-RWDD3S4R434 201 aa13.84□□□□□ -0.19
SYNGR3-204ENST00000564642 CORTO00230 105 aa13.83□□□□□ -0.2
SYNGR3-204ENST00000564642 GNG7O60262 68 aa13.83□□□□□ -0.2
SYNGR3-204ENST00000564642 IGHV3-48P01763 117 aa13.83□□□□□ -0.2
SYNGR3-204ENST00000564642 CTSGP08311 255 aa13.83□□□□□ -0.2
SYNGR3-204ENST00000564642 C8orf88P0DMB2 117 aa13.83□□□□□ -0.2
SYNGR3-204ENST00000564642 ADMP35318 185 aa13.83□□□□□ -0.2
SYNGR3-204ENST00000564642 TMEM187Q14656 261 aa13.83□□□□□ -0.2
SYNGR3-204ENST00000564642 BTNL8Q6UX41 500 aa13.83□□□□□ -0.2
SYNGR3-204ENST00000564642 DUSP18Q8NEJ0 188 aa13.83□□□□□ -0.2
SYNGR3-204ENST00000564642 OR52E5Q8NH55 327 aa13.83□□□□□ -0.2
SYNGR3-204ENST00000564642 DEDD2Q8WXF8 326 aa13.83□□□□□ -0.2
SYNGR3-204ENST00000564642 IL22RA2Q969J5 263 aa13.83□□□□□ -0.2
SYNGR3-204ENST00000564642 DAZ1Q9NQZ3 744 aaKnown RBP13.83□□□□□ -0.2
SYNGR3-204ENST00000564642 CACNG5Q9UF02 275 aa13.83□□□□□ -0.2
SYNGR3-204ENST00000564642 CD7P09564 240 aa13.82□□□□□ -0.2
SYNGR3-204ENST00000564642 FCGR2BP31994 310 aaPredicted RBP13.82□□□□□ -0.2
SYNGR3-204ENST00000564642 INPP1P49441 399 aa13.82□□□□□ -0.2
SYNGR3-204ENST00000564642 RBPMS2Q6ZRY4 209 aaKnown RBP13.82□□□□□ -0.2
SYNGR3-204ENST00000564642 TMED4Q7Z7H5 227 aa13.82□□□□□ -0.2
SYNGR3-204ENST00000564642 TMEM61Q8N0U2 210 aa13.82□□□□□ -0.2
SYNGR3-204ENST00000564642 PRR13Q9NZ81 148 aa13.82□□□□□ -0.2
SYNGR3-204ENST00000564642 NDUFA13Q9P0J0 144 aa13.82□□□□□ -0.2
SYNGR3-204ENST00000564642 CACFD1Q9UGQ2 172 aa13.82□□□□□ -0.2
SYNGR3-204ENST00000564642 COL7A1Q02388 2944 aa13.82□□□□□ -0.2
SYNGR3-204ENST00000564642 BIRC6Q9NR09 4857 aa13.82□□□□□ -0.2
SYNGR3-204ENST00000564642 K7EMT4 169 aa13.81□□□□□ -0.2
SYNGR3-204ENST00000564642 YIF1AO95070 293 aa13.81□□□□□ -0.2
SYNGR3-204ENST00000564642 SCAF4O95104 1147 aaKnown RBP13.81□□□□□ -0.2
SYNGR3-204ENST00000564642 RNASE2P10153 161 aaKnown RBP13.81□□□□□ -0.2
SYNGR3-204ENST00000564642 NPBWR1P48145 328 aa13.81□□□□□ -0.2
SYNGR3-204ENST00000564642 ANKRD55Q3KP44 614 aa13.81□□□□□ -0.2
SYNGR3-204ENST00000564642 AARDQ4LEZ3 155 aa13.81□□□□□ -0.2
SYNGR3-204ENST00000564642 SLC16A13Q7RTY0 426 aa13.81□□□□□ -0.2
SYNGR3-204ENST00000564642 LGI3Q8N145 548 aa13.81□□□□□ -0.2
SYNGR3-204ENST00000564642 SLC25A21Q9BQT8 299 aaPredicted RBP13.81□□□□□ -0.2
SYNGR3-204ENST00000564642 HEYLQ9NQ87 328 aaPredicted RBP13.81□□□□□ -0.2
SYNGR3-204ENST00000564642 DNAH9Q9NYC9 4486 aa13.81□□□□□ -0.2
SYNGR3-204ENST00000564642 IGHV3OR16-8A0A075B7F1 116 aa13.8□□□□□ -0.2
SYNGR3-204ENST00000564642 TRAV25A0A0B4J276 109 aa13.8□□□□□ -0.2
SYNGR3-204ENST00000564642 PIGBOS1A0A0B4J2F0 54 aa13.8□□□□□ -0.2
SYNGR3-204ENST00000564642 C15orf62A8K5M9 175 aa13.8□□□□□ -0.2
SYNGR3-204ENST00000564642 CEBPZOSA8MTT3 80 aa13.8□□□□□ -0.2
SYNGR3-204ENST00000564642 SULT1A3P0DMM9 295 aa13.8□□□□□ -0.2
SYNGR3-204ENST00000564642 SULT1A4P0DMN0 295 aa13.8□□□□□ -0.2
SYNGR3-204ENST00000564642 HTR2BP41595 481 aa13.8□□□□□ -0.2
SYNGR3-204ENST00000564642 SUPT4H1P63272 117 aaKnown RBP13.8□□□□□ -0.2
SYNGR3-204ENST00000564642 SRPXP78539 464 aa13.8□□□□□ -0.2
SYNGR3-204ENST00000564642 TMEM128Q5BJH2 165 aa13.8□□□□□ -0.2
SYNGR3-204ENST00000564642 OR52B4Q8NGK2 314 aa13.8□□□□□ -0.2
SYNGR3-204ENST00000564642 RCHY1Q96PM5 261 aa13.8□□□□□ -0.2
SYNGR3-204ENST00000564642 SRRQ9GZT4 340 aa13.8□□□□□ -0.2
SYNGR3-204ENST00000564642 A0A0B4J2A0 478 aa13.79□□□□□ -0.2
SYNGR3-204ENST00000564642 OR11H12B2RN74 326 aa13.79□□□□□ -0.2
SYNGR3-204ENST00000564642 ZNF207O43670 478 aaKnown RBP13.79□□□□□ -0.2
SYNGR3-204ENST00000564642 OPRK1P41145 380 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms