RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 AHNAKQ09666 5890 aaKnown RBP0.57□□□□□ -2.32
DENND4A-205ENST00000562540 TNRC6BQ9UPQ9 1833 aaKnown RBP0.57□□□□□ -2.32
DENND4A-205ENST00000562540 ZNF469Q96JG9 3925 aaPredicted RBP0.56□□□□□ -2.32
DENND4A-205ENST00000562540 IGKV1D-42A0A075B6H8 117 aa0.56□□□□□ -2.32
DENND4A-205ENST00000562540 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.56□□□□□ -2.32
DENND4A-205ENST00000562540 OR5G3P0C626 314 aa0.56□□□□□ -2.32
DENND4A-205ENST00000562540 PRB4P10163 310 aaPredicted RBP0.56□□□□□ -2.32
DENND4A-205ENST00000562540 FKBP2P26885 142 aaKnown RBP0.56□□□□□ -2.32
DENND4A-205ENST00000562540 Q6ZS49 121 aa0.56□□□□□ -2.32
DENND4A-205ENST00000562540 DEFB128Q7Z7B8 93 aa0.56□□□□□ -2.32
DENND4A-205ENST00000562540 C1orf158Q8N1D5 194 aa0.56□□□□□ -2.32
DENND4A-205ENST00000562540 OR4E2Q8NGC2 313 aa0.56□□□□□ -2.32
DENND4A-205ENST00000562540 MRPL30Q8TCC3 161 aaKnown RBP0.56□□□□□ -2.32
DENND4A-205ENST00000562540 KLK6Q92876 244 aa0.56□□□□□ -2.32
DENND4A-205ENST00000562540 MRPS26Q9BYN8 205 aaKnown RBP0.56□□□□□ -2.32
DENND4A-205ENST00000562540 XPNPEP1Q9NQW7 623 aa0.56□□□□□ -2.32
DENND4A-205ENST00000562540 ACER3Q9NUN7 267 aa0.56□□□□□ -2.32
DENND4A-205ENST00000562540 KLK9Q9UKQ9 250 aa0.56□□□□□ -2.32
DENND4A-205ENST00000562540 ZFP30Q9Y2G7 519 aa0.56□□□□□ -2.32
DENND4A-205ENST00000562540 C9orf84Q5VXU9 1444 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 DOCK3Q8IZD9 2030 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 LOC110117498A0A087WWA1 95 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 GOLGA6L19H0YKK7 550 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 TGOLN2O43493 480 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 HYPMO75409 117 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 TNNC2P02585 160 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 CALB1P05937 261 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 CTSDP07339 412 aaPredicted RBP0.55□□□□□ -2.32
DENND4A-205ENST00000562540 ASAH2BP0C7U1 165 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 SPI1P17947 270 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 SPANXN5Q5MJ07 72 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 CLVS1Q8IUQ0 354 aaPredicted RBP0.55□□□□□ -2.32
DENND4A-205ENST00000562540 LINC00311Q8N616 119 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 OR13C4Q8NGS5 318 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 PFN4Q8NHR9 129 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 DNAJC9Q8WXX5 260 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 OPTNQ96CV9 577 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 LINC00526Q96FQ7 95 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 COMMD5Q9GZQ3 224 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 CMTM6Q9NX76 183 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 DENND4CQ5VZ89 1909 aa0.55□□□□□ -2.32
DENND4A-205ENST00000562540 HLA-DRB1P01911 266 aa0.54□□□□□ -2.32
DENND4A-205ENST00000562540 CRYGAP11844 174 aa0.54□□□□□ -2.32
DENND4A-205ENST00000562540 ALKAL1Q6UXT8 129 aa0.54□□□□□ -2.32
DENND4A-205ENST00000562540 MIR17HGQ75NE6 70 aa0.54□□□□□ -2.32
DENND4A-205ENST00000562540 C20orf196Q8IYI0 205 aa0.54□□□□□ -2.32
DENND4A-205ENST00000562540 LRRC25Q8N386 305 aaPredicted RBP0.54□□□□□ -2.32
DENND4A-205ENST00000562540 Q8N814 137 aa0.54□□□□□ -2.32
DENND4A-205ENST00000562540 OR5A1Q8NGJ0 315 aa0.54□□□□□ -2.32
DENND4A-205ENST00000562540 SLC35B4Q969S0 331 aa0.54□□□□□ -2.32
DENND4A-205ENST00000562540 PTH2Q96A98 100 aa0.54□□□□□ -2.32
DENND4A-205ENST00000562540 OBSCN-AS1Q96MR7 158 aa0.54□□□□□ -2.32
DENND4A-205ENST00000562540 OR52E6Q96RD3 313 aa0.54□□□□□ -2.32
DENND4A-205ENST00000562540 NIPSNAP1Q9BPW8 284 aa0.54□□□□□ -2.32
DENND4A-205ENST00000562540 ULBP3Q9BZM4 244 aa0.54□□□□□ -2.32
DENND4A-205ENST00000562540 MIXL1Q9H2W2 232 aa0.54□□□□□ -2.32
DENND4A-205ENST00000562540 PRTFDC1Q9NRG1 225 aa0.54□□□□□ -2.32
DENND4A-205ENST00000562540 FBXL12Q9NXK8 326 aa0.54□□□□□ -2.32
DENND4A-205ENST00000562540 MYH10P35580 1976 aa0.54□□□□□ -2.32
DENND4A-205ENST00000562540 USP24Q9UPU5 2620 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 STRCQ7RTU9 1775 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 TGIF2-C20orf24A0A0A6YYL0 155 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 PQLC2LA1A4F0 135 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 CLDN25C9JDP6 229 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 KCNK1O00180 336 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 OR1I1O60431 355 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 TCL1BO95988 128 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 IGKV1-5P01602 117 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 RAB4BP61018 213 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 MAGOHP61326 146 aaKnown RBP0.53□□□□□ -2.32
DENND4A-205ENST00000562540 RHEBQ15382 184 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 HIST3H3Q16695 136 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 KHDC3LQ587J8 217 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 CCDC122Q5T0U0 273 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 LPCAT3Q6P1A2 487 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 ANKRD29Q8N6D5 301 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 TERB2Q8NHR7 220 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 PPP1R2P1Q96PQ5 205 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 TMEM147Q9BVK8 224 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 SLC39A9Q9NUM3 307 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 MYO18AQ92614 2054 aaKnown RBP0.53□□□□□ -2.32
DENND4A-205ENST00000562540 TET1Q8NFU7 2136 aa0.53□□□□□ -2.32
DENND4A-205ENST00000562540 TRAV9-1A0A075B6T8 112 aa0.52□□□□□ -2.33
DENND4A-205ENST00000562540 C2orf70A6NJV1 201 aa0.52□□□□□ -2.33
DENND4A-205ENST00000562540 PSMD12O00232 456 aaPredicted RBP0.52□□□□□ -2.33
DENND4A-205ENST00000562540 OR2T1O43869 369 aa0.52□□□□□ -2.33
DENND4A-205ENST00000562540 UBL3O95164 117 aa0.52□□□□□ -2.33
DENND4A-205ENST00000562540 IFNA10P01566 189 aa0.52□□□□□ -2.33
DENND4A-205ENST00000562540 BAALC-AS2P0C853 105 aa0.52□□□□□ -2.33
DENND4A-205ENST00000562540 CD79AP11912 226 aa0.52□□□□□ -2.33
DENND4A-205ENST00000562540 MIFP14174 115 aa0.52□□□□□ -2.33
DENND4A-205ENST00000562540 SPCS3P61009 180 aa0.52□□□□□ -2.33
DENND4A-205ENST00000562540 PSME3P61289 254 aa0.52□□□□□ -2.33
DENND4A-205ENST00000562540 PDE6HQ13956 83 aa0.52□□□□□ -2.33
DENND4A-205ENST00000562540 COTL1Q14019 142 aa0.52□□□□□ -2.33
DENND4A-205ENST00000562540 C8orf74Q6P047 294 aa0.52□□□□□ -2.33
DENND4A-205ENST00000562540 DDI1Q8WTU0 396 aa0.52□□□□□ -2.33
DENND4A-205ENST00000562540 H1FXQ92522 213 aaKnown RBP0.52□□□□□ -2.33
DENND4A-205ENST00000562540 TOMM6Q96B49 74 aa0.52□□□□□ -2.33
DENND4A-205ENST00000562540 IMP4Q96G21 291 aaKnown RBP0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms