RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 ZP3P21754 424 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 HTR2BP41595 481 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 DEFA5Q01523 94 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 KLF5Q13887 457 aaPredicted RBP7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 C12orf45Q8N5I9 185 aaPredicted RBP7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 OR4D5Q8NGN0 318 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 OR1S1Q8NH92 325 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 ZNF502Q8TBZ5 544 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 SCARB1Q8WTV0 552 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 EEF1AKMT3Q96AZ1 226 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 CCDC140Q96MF4 163 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 TXN2Q99757 166 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 SEC22CQ9BRL7 303 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 MCRIP2Q9BUT9 160 aaKnown RBP7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 HIPK2Q9H2X6 1198 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 ENY2Q9NPA8 101 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 HEYLQ9NQ87 328 aaPredicted RBP7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 U3KQ87 197 aa7.4□□□□□ -1.22
RABGGTA-221ENST00000561055 ANKRD34BA5PLL1 514 aa7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 MFSD2BA6NFX1 497 aa7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 MPTX1A8MV57 137 aa7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 F8W735 103 aaPredicted RBP7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 BMPR1BO00238 502 aa7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 MED6O75586 246 aa7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 TRBV12-3P01733 135 aa7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 HOXD3P31249 432 aaPredicted RBP7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 HOXA1P49639 335 aaPredicted RBP7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 SPINK9Q5DT21 86 aa7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 SAMD5Q5TGI4 173 aa7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 NOXA1Q86UR1 476 aa7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 GPHB5Q86YW7 130 aa7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 DTD1Q8TEA8 209 aa7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 DLX4Q92988 240 aaPredicted RBP7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 OR10C1Q96KK4 312 aa7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 RBKSQ9H477 322 aa7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 GPN1Q9HCN4 374 aaPredicted RBP7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 GAR1Q9NY12 217 aaKnown RBP7.39□□□□□ -1.23
RABGGTA-221ENST00000561055 CEBPZOSA8MTT3 80 aa7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 SYNGR2O43760 224 aa7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 GGCTO75223 188 aaKnown RBP7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 CLEC3BP05452 202 aa7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 INSL3P51460 131 aa7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 SLURP1P55000 103 aa7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 IL15RAQ13261 267 aa7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 DCTN2Q13561 401 aaKnown RBP7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 IAH1Q2TAA2 248 aaPredicted RBP7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 KPRPQ5T749 579 aaPredicted RBP7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 ACSM6Q6P461 480 aa7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 SPSB3Q6PJ21 355 aa7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 CLEC19AQ6UXS0 136 aa7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 ZBTB8BQ8NAP8 495 aaPredicted RBP7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 SLC24A4Q8NFF2 622 aa7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 RNASEH2CQ8TDP1 164 aaKnown RBP7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 TMEM170AQ8WVE7 144 aa7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 DCUN1D4Q92564 292 aa7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 BSCL2Q96G97 398 aaPredicted RBP7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 CIB3Q96Q77 187 aaPredicted RBP7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 GPR61Q9BZJ8 451 aa7.38□□□□□ -1.23
RABGGTA-221ENST00000561055 NOTCH1P46531 2555 aa7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 C7orf66A4D0T2 115 aa7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 LGALS9O00182 355 aa7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 OVOL1O14753 267 aa7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 MT-CO2P00403 227 aa7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 IGLL1P15814 213 aa7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 SPNP16150 400 aa7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 NPY1RP25929 384 aa7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 NKX2-1P43699 371 aaPredicted RBP7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 MFAP4P55083 255 aa7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 TATDN3Q17R31 274 aa7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 RPEL1Q2QD12 228 aa7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 C1QL4Q86Z23 238 aa7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 MISP3Q96FF7 219 aa7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 SMIM8Q96KF7 97 aa7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 C2orf50Q96LR7 162 aa7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 FNDC4Q9H6D8 234 aaPredicted RBP7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 C21orf62Q9NYP8 219 aa7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 SIGLEC8Q9NYZ4 499 aa7.37□□□□□ -1.23
RABGGTA-221ENST00000561055 C15orf62A8K5M9 175 aa7.36□□□□□ -1.23
RABGGTA-221ENST00000561055 PPP5D1E7EU14 171 aa7.36□□□□□ -1.23
RABGGTA-221ENST00000561055 TGOLN2O43493 480 aa7.36□□□□□ -1.23
RABGGTA-221ENST00000561055 NXPH3O95157 252 aa7.36□□□□□ -1.23
RABGGTA-221ENST00000561055 IGHV3-23P01764 117 aa7.36□□□□□ -1.23
RABGGTA-221ENST00000561055 CTSGP08311 255 aa7.36□□□□□ -1.23
RABGGTA-221ENST00000561055 ARL3P36405 182 aa7.36□□□□□ -1.23
RABGGTA-221ENST00000561055 TAS2R30P59541 319 aa7.36□□□□□ -1.23
RABGGTA-221ENST00000561055 BEAN1Q3B7T3 259 aa7.36□□□□□ -1.23
RABGGTA-221ENST00000561055 OXLD1Q5BKU9 147 aa7.36□□□□□ -1.23
RABGGTA-221ENST00000561055 C9orf66Q5T8R8 295 aa7.36□□□□□ -1.23
RABGGTA-221ENST00000561055 IL34Q6ZMJ4 242 aa7.36□□□□□ -1.23
RABGGTA-221ENST00000561055 REC114Q7Z4M0 266 aa7.36□□□□□ -1.23
RABGGTA-221ENST00000561055 OR9G4Q8NGQ1 327 aa7.36□□□□□ -1.23
RABGGTA-221ENST00000561055 OR4X1Q8NH49 305 aa7.36□□□□□ -1.23
RABGGTA-221ENST00000561055 ZNF436Q9C0F3 470 aaPredicted RBP7.36□□□□□ -1.23
RABGGTA-221ENST00000561055 S4R3C0 116 aa7.36□□□□□ -1.23
RABGGTA-221ENST00000561055 RPS10-NUDT3A0A1W2PQS6 291 aa7.35□□□□□ -1.23
RABGGTA-221ENST00000561055 A8MWP6 167 aa7.35□□□□□ -1.23
RABGGTA-221ENST00000561055 G3V4G9 280 aa7.35□□□□□ -1.23
RABGGTA-221ENST00000561055 CCSO14618 274 aa7.35□□□□□ -1.23
RABGGTA-221ENST00000561055 OR2C1O95371 312 aa7.35□□□□□ -1.23
RABGGTA-221ENST00000561055 TMEM50AO95807 157 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms