RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 NDUFA4L2Q9NRX3 87 aa8.17□□□□□ -1.1
TPM1-227ENST00000560970 OR51B2Q9Y5P1 312 aa8.17□□□□□ -1.1
TPM1-227ENST00000560970 HYDINQ4G0P3 5121 aa8.17□□□□□ -1.1
TPM1-227ENST00000560970 FAM223BA6NKX1 122 aa8.16□□□□□ -1.1
TPM1-227ENST00000560970 GIPP09681 153 aaPredicted RBP8.16□□□□□ -1.1
TPM1-227ENST00000560970 KLK9Q2XQG4 91 aa8.16□□□□□ -1.1
TPM1-227ENST00000560970 LCN12Q6JVE5 192 aa8.16□□□□□ -1.1
TPM1-227ENST00000560970 ZNF343Q6P1L6 599 aa8.16□□□□□ -1.1
TPM1-227ENST00000560970 H2BFWTQ7Z2G1 175 aa8.16□□□□□ -1.1
TPM1-227ENST00000560970 LYG2Q86SG7 212 aa8.16□□□□□ -1.1
TPM1-227ENST00000560970 GTSCR1Q86UQ5 136 aa8.16□□□□□ -1.1
TPM1-227ENST00000560970 NOXA1Q86UR1 476 aa8.16□□□□□ -1.1
TPM1-227ENST00000560970 FAM223AQ8IWN6 122 aa8.16□□□□□ -1.1
TPM1-227ENST00000560970 OR9G4Q8NGQ1 327 aa8.16□□□□□ -1.1
TPM1-227ENST00000560970 OR1L8Q8NGR8 309 aa8.16□□□□□ -1.1
TPM1-227ENST00000560970 GLYATL2Q8WU03 294 aa8.16□□□□□ -1.1
TPM1-227ENST00000560970 ZNF436Q9C0F3 470 aaPredicted RBP8.16□□□□□ -1.1
TPM1-227ENST00000560970 TMEM222Q9H0R3 208 aa8.16□□□□□ -1.1
TPM1-227ENST00000560970 MGAT4CQ9UBM8 478 aa8.16□□□□□ -1.1
TPM1-227ENST00000560970 KLK9Q9UKQ9 250 aa8.16□□□□□ -1.1
TPM1-227ENST00000560970 PRNDQ9UKY0 176 aa8.16□□□□□ -1.1
TPM1-227ENST00000560970 S4R3C0 116 aa8.16□□□□□ -1.1
TPM1-227ENST00000560970 IGLV11-55A0A075B6I3 123 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 A0A0G2JLM5 398 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 TEX13DA0A0J9YY54 714 aaPredicted RBP8.15□□□□□ -1.1
TPM1-227ENST00000560970 SNAPC5O75971 98 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 JTBO76095 146 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 NDUFB8O95169 186 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 IGHV3-23P01764 117 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 CXCL3P19876 107 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 AKR1C2P52895 323 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 MFAP2P55001 183 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 RAP2BP61225 183 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 SUPT4H1P63272 117 aaKnown RBP8.15□□□□□ -1.1
TPM1-227ENST00000560970 DHRS2Q13268 280 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 TMEM187Q14656 261 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 C15orf32Q32M92 178 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 TMEM128Q5BJH2 165 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 SPINK9Q5DT21 86 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 C12orf45Q8N5I9 185 aaPredicted RBP8.15□□□□□ -1.1
TPM1-227ENST00000560970 OR52B4Q8NGK2 314 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 MITD1Q8WV92 249 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 USMG5Q96IX5 58 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 HYLS1Q96M11 299 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 CCDC140Q96MF4 163 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 SRSF8Q9BRL6 282 aaKnown RBP8.15□□□□□ -1.1
TPM1-227ENST00000560970 HINT2Q9BX68 163 aa8.15□□□□□ -1.1
TPM1-227ENST00000560970 PLECQ15149 4684 aaKnown RBP8.14□□□□□ -1.11
TPM1-227ENST00000560970 A0A0B4J2A0 478 aa8.14□□□□□ -1.11
TPM1-227ENST00000560970 C9orf170A2RU37 121 aa8.14□□□□□ -1.11
TPM1-227ENST00000560970 MFSD2BA6NFX1 497 aa8.14□□□□□ -1.11
TPM1-227ENST00000560970 BMPR1BO00238 502 aa8.14□□□□□ -1.11
TPM1-227ENST00000560970 CDS2O95674 445 aa8.14□□□□□ -1.11
TPM1-227ENST00000560970 HLA-AP01891 365 aaKnown RBP8.14□□□□□ -1.11
TPM1-227ENST00000560970 OR13C7P0DN81 318 aa8.14□□□□□ -1.11
TPM1-227ENST00000560970 DHODHQ02127 395 aa8.14□□□□□ -1.11
TPM1-227ENST00000560970 PPP1R1AQ13522 171 aa8.14□□□□□ -1.11
TPM1-227ENST00000560970 HAGHQ16775 308 aa8.14□□□□□ -1.11
TPM1-227ENST00000560970 THOC7Q6I9Y2 204 aaKnown RBP8.14□□□□□ -1.11
TPM1-227ENST00000560970 Q6ZRM9 215 aa8.14□□□□□ -1.11
TPM1-227ENST00000560970 SELENOHQ8IZQ5 122 aaKnown RBP8.14□□□□□ -1.11
TPM1-227ENST00000560970 NECAP1Q8NC96 275 aa8.14□□□□□ -1.11
TPM1-227ENST00000560970 OR5B3Q8NH48 314 aa8.14□□□□□ -1.11
TPM1-227ENST00000560970 OR4A16Q8NH70 328 aa8.14□□□□□ -1.11
TPM1-227ENST00000560970 RBPMSQ93062 196 aaKnown RBP8.14□□□□□ -1.11
TPM1-227ENST00000560970 LSM10Q969L4 123 aaKnown RBP8.14□□□□□ -1.11
TPM1-227ENST00000560970 GALNT14Q96FL9 552 aa8.14□□□□□ -1.11
TPM1-227ENST00000560970 SHPKQ9UHJ6 478 aa8.14□□□□□ -1.11
TPM1-227ENST00000560970 FBXL7Q9UJT9 491 aa8.14□□□□□ -1.11
TPM1-227ENST00000560970 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.13□□□□□ -1.11
TPM1-227ENST00000560970 PPP5D1E7EU14 171 aa8.13□□□□□ -1.11
TPM1-227ENST00000560970 ST8SIA3O43173 380 aa8.13□□□□□ -1.11
TPM1-227ENST00000560970 B3GALNT1O75752 331 aa8.13□□□□□ -1.11
TPM1-227ENST00000560970 SFT2D2O95562 160 aa8.13□□□□□ -1.11
TPM1-227ENST00000560970 AKR1C4P17516 323 aa8.13□□□□□ -1.11
TPM1-227ENST00000560970 SYNJ2BPP57105 145 aa8.13□□□□□ -1.11
TPM1-227ENST00000560970 PRCDQ00LT1 54 aa8.13□□□□□ -1.11
TPM1-227ENST00000560970 ATP5G2Q06055 141 aa8.13□□□□□ -1.11
TPM1-227ENST00000560970 KLF5Q13887 457 aaPredicted RBP8.13□□□□□ -1.11
TPM1-227ENST00000560970 TMEM268Q5VZI3 342 aa8.13□□□□□ -1.11
TPM1-227ENST00000560970 TMEM56Q96MV1 263 aa8.13□□□□□ -1.11
TPM1-227ENST00000560970 FKBP11Q9NYL4 201 aa8.13□□□□□ -1.11
TPM1-227ENST00000560970 SIGLEC8Q9NYZ4 499 aa8.13□□□□□ -1.11
TPM1-227ENST00000560970 PEF1Q9UBV8 284 aaKnown RBP8.13□□□□□ -1.11
TPM1-227ENST00000560970 F11RQ9Y624 299 aaKnown RBP8.13□□□□□ -1.11
TPM1-227ENST00000560970 TMEM56-RWDD3S4R434 201 aa8.13□□□□□ -1.11
TPM1-227ENST00000560970 IGHV3-21A0A0B4J1V1 117 aa8.12□□□□□ -1.11
TPM1-227ENST00000560970 GOSR2O14653 212 aa8.12□□□□□ -1.11
TPM1-227ENST00000560970 DEFA4P12838 97 aa8.12□□□□□ -1.11
TPM1-227ENST00000560970 HIST1H1BP16401 226 aaKnown RBP8.12□□□□□ -1.11
TPM1-227ENST00000560970 NKX2-5P52952 324 aaPredicted RBP8.12□□□□□ -1.11
TPM1-227ENST00000560970 HSPE1P61604 102 aaKnown RBP8.12□□□□□ -1.11
TPM1-227ENST00000560970 RPEL1Q2QD12 228 aa8.12□□□□□ -1.11
TPM1-227ENST00000560970 LINC01559Q495D7 138 aa8.12□□□□□ -1.11
TPM1-227ENST00000560970 IL34Q6ZMJ4 242 aa8.12□□□□□ -1.11
TPM1-227ENST00000560970 OR2C3Q8N628 320 aa8.12□□□□□ -1.11
TPM1-227ENST00000560970 SLC35G3Q8N808 338 aa8.12□□□□□ -1.11
TPM1-227ENST00000560970 OR2K2Q8NGT1 345 aa8.12□□□□□ -1.11
TPM1-227ENST00000560970 OR2T35Q8NGX2 323 aa8.12□□□□□ -1.11
TPM1-227ENST00000560970 COQ8AQ8NI60 647 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms