RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 NDUFA4O00483 81 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 DFFBO76075 338 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 EIF4EP06730 217 aaKnown RBP6.8□□□□□ -1.32
HERC1-210ENST00000560897 CTXN2P0C2S0 81 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 SPART-AS1P0CW21 52 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 TNFSF8P32971 234 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 RCVRNP35243 200 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 TMEM50BP56557 158 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 DEFB131AP59861 70 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 MRPS10P82664 201 aaKnown RBP6.8□□□□□ -1.32
HERC1-210ENST00000560897 CNIH2Q6PI25 160 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 ZNF66Q6ZN08 573 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 C15orf53Q8NAA6 179 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 ZNF502Q8TBZ5 544 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 ADTRPQ96IZ2 230 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 C17orf77Q96MU5 243 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 GINS4Q9BRT9 223 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 SLIRPQ9GZT3 109 aaKnown RBP6.8□□□□□ -1.32
HERC1-210ENST00000560897 AUNIPQ9H7T9 357 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 SLC2A9Q9NRM0 540 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 SDHAF2Q9NX18 166 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 CLEC5AQ9NY25 188 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 RDH8Q9NYR8 311 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 IGLV11-55A0A075B6I3 123 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 IGHV3OR16-8A0A075B7F1 116 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 A0A0A6YYD4 124 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 TEX48A0A1B0GUV7 120 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 OR2T8A6NH00 312 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 TRDCB7Z8K6 153 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 SULT1C2O00338 296 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 CYB5BO43169 146 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 CRYGCP07315 174 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 DTYMKP23919 212 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 TSPAN5P62079 268 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 PLAC9Q5JTB6 97 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 ZNF880Q6PDB4 577 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 TMEM116Q8NCL8 245 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 OR10J5Q8NHC4 309 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 VSTM2AQ8TAG5 236 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 GIMAP1Q8WWP7 306 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 S100ZQ8WXG8 99 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 SLC25A38Q96DW6 304 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 CYYR1Q96J86 154 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 RHPN1-AS1Q9BWJ2 59 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 SCPEP1Q9HB40 452 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 TAS2R8Q9NYW2 309 aa6.79□□□□□ -1.32
HERC1-210ENST00000560897 C15orf62A8K5M9 175 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 CENPXA8MT69 81 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 MFNGO00587 321 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 BET1O15155 118 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 DIRAS3O95661 229 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 NAPSAO96009 420 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 SMR3BP02814 79 aaPredicted RBP6.78□□□□□ -1.32
HERC1-210ENST00000560897 REG1AP05451 166 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 CD5P06127 495 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 AREGP15514 252 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 NAT1P18440 290 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 C4BPBP20851 252 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 PTBP1P26599 531 aaKnown RBP eCLIP6.78□□□□□ -1.32
HERC1-210ENST00000560897 EMP1P54849 157 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 XGP55808 180 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 AP3S2P59780 193 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 RNASE12Q5GAN4 147 aaKnown RBP6.78□□□□□ -1.32
HERC1-210ENST00000560897 TRIQKQ629K1 86 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 SPSB3Q6PJ21 355 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 TMEM17Q86X19 198 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 BEST4Q8NFU0 473 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 OR4A4PQ8NGN8 299 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 NUDCD2Q8WVJ2 157 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 BSCL2Q96G97 398 aaPredicted RBP6.78□□□□□ -1.32
HERC1-210ENST00000560897 NXF2Q9GZY0 626 aaKnown RBP6.78□□□□□ -1.32
HERC1-210ENST00000560897 Q9N2K0 584 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 SMPXQ9UHP9 88 aa6.78□□□□□ -1.32
HERC1-210ENST00000560897 IGHV7-4-1A0A0J9YVY3 117 aa6.77□□□□□ -1.33
HERC1-210ENST00000560897 TMEM189A5PLL7 270 aa6.77□□□□□ -1.33
HERC1-210ENST00000560897 MEIS3P1A6NDR6 274 aa6.77□□□□□ -1.33
HERC1-210ENST00000560897 PRSS47A8MTI9 375 aa6.77□□□□□ -1.33
HERC1-210ENST00000560897 CHEK1O14757 476 aa6.77□□□□□ -1.33
HERC1-210ENST00000560897 FABP7O15540 132 aa6.77□□□□□ -1.33
HERC1-210ENST00000560897 FCER2P06734 321 aa6.77□□□□□ -1.33
HERC1-210ENST00000560897 FCGR3AP08637 254 aa6.77□□□□□ -1.33
HERC1-210ENST00000560897 IL6RP08887 468 aaPredicted RBP6.77□□□□□ -1.33
HERC1-210ENST00000560897 GIG44P09565 113 aaPredicted RBP6.77□□□□□ -1.33
HERC1-210ENST00000560897 ZNF735P0CB33 412 aa6.77□□□□□ -1.33
HERC1-210ENST00000560897 BTF3P20290 206 aaKnown RBP6.77□□□□□ -1.33
HERC1-210ENST00000560897 MAS1LP35410 378 aa6.77□□□□□ -1.33
HERC1-210ENST00000560897 FAUP35544 74 aaKnown RBP6.77□□□□□ -1.33
HERC1-210ENST00000560897 TAS2R46P59540 309 aa6.77□□□□□ -1.33
HERC1-210ENST00000560897 RPL11P62913 178 aaKnown RBP6.77□□□□□ -1.33
HERC1-210ENST00000560897 TTC32Q5I0X7 151 aa6.77□□□□□ -1.33
HERC1-210ENST00000560897 TMEM88Q6PEY1 159 aa6.77□□□□□ -1.33
HERC1-210ENST00000560897 LINC00299Q6ZSB3 139 aa6.77□□□□□ -1.33
HERC1-210ENST00000560897 TRPT1Q86TN4 253 aaKnown RBP6.77□□□□□ -1.33
HERC1-210ENST00000560897 OR5H2Q8NGV7 314 aa6.77□□□□□ -1.33
HERC1-210ENST00000560897 MAFIPQ8WZ33 124 aa6.77□□□□□ -1.33
HERC1-210ENST00000560897 HDHD3Q9BSH5 251 aaPredicted RBP6.77□□□□□ -1.33
HERC1-210ENST00000560897 IGHV3-49A0A0A0MS15 119 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 TRBV6-6A0A0A6YYG2 114 aa6.76□□□□□ -1.33
HERC1-210ENST00000560897 FOXI3A8MTJ6 420 aaPredicted RBP6.76□□□□□ -1.33
HERC1-210ENST00000560897 KRTAP29-1A8MX34 341 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms