RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 IGHV3OR16-8A0A075B7F1 116 aa15.25■□□□□ 0.03
CHRNA3-207ENST00000559941 LOC102724200A0A096LPH7 203 aaPredicted RBP15.25■□□□□ 0.03
CHRNA3-207ENST00000559941 A0A0B4J293 547 aa15.25■□□□□ 0.03
CHRNA3-207ENST00000559941 INS-IGF2F8WCM5 200 aa15.25■□□□□ 0.03
CHRNA3-207ENST00000559941 CTSDP07339 412 aaPredicted RBP15.25■□□□□ 0.03
CHRNA3-207ENST00000559941 AKR1C2P52895 323 aa15.25■□□□□ 0.03
CHRNA3-207ENST00000559941 CLVS1Q8IUQ0 354 aaPredicted RBP15.25■□□□□ 0.03
CHRNA3-207ENST00000559941 MARCH1Q8TCQ1 289 aa15.25■□□□□ 0.03
CHRNA3-207ENST00000559941 ZNF207O43670 478 aaKnown RBP15.24■□□□□ 0.03
CHRNA3-207ENST00000559941 B3GALNT1O75752 331 aa15.24■□□□□ 0.03
CHRNA3-207ENST00000559941 UCP1P25874 307 aa15.24■□□□□ 0.03
CHRNA3-207ENST00000559941 MEF2DQ14814 521 aa15.24■□□□□ 0.03
CHRNA3-207ENST00000559941 TRIM16LQ309B1 348 aa15.24■□□□□ 0.03
CHRNA3-207ENST00000559941 SP6Q3SY56 376 aa15.24■□□□□ 0.03
CHRNA3-207ENST00000559941 SPINK9Q5DT21 86 aa15.24■□□□□ 0.03
CHRNA3-207ENST00000559941 RAB2BQ8WUD1 216 aa15.24■□□□□ 0.03
CHRNA3-207ENST00000559941 SMIM4Q8WVI0 70 aa15.24■□□□□ 0.03
CHRNA3-207ENST00000559941 PINX1Q96BK5 328 aaKnown RBP15.24■□□□□ 0.03
CHRNA3-207ENST00000559941 NXF2Q9GZY0 626 aaKnown RBP15.24■□□□□ 0.03
CHRNA3-207ENST00000559941 SMPXQ9UHP9 88 aa15.24■□□□□ 0.03
CHRNA3-207ENST00000559941 LYSTQ99698 3801 aa15.23■□□□□ 0.03
CHRNA3-207ENST00000559941 CTDSPLO15194 276 aa15.23■□□□□ 0.03
CHRNA3-207ENST00000559941 ST8SIA3O43173 380 aa15.23■□□□□ 0.03
CHRNA3-207ENST00000559941 IGHV3-48P01763 117 aa15.23■□□□□ 0.03
CHRNA3-207ENST00000559941 SLC35G3Q8N808 338 aa15.23■□□□□ 0.03
CHRNA3-207ENST00000559941 IL17DQ8TAD2 202 aa15.23■□□□□ 0.03
CHRNA3-207ENST00000559941 DYNC2LI1Q8TCX1 351 aa15.23■□□□□ 0.03
CHRNA3-207ENST00000559941 OR10C1Q96KK4 312 aa15.23■□□□□ 0.03
CHRNA3-207ENST00000559941 BCL7BQ9BQE9 202 aa15.23■□□□□ 0.03
CHRNA3-207ENST00000559941 RABL2AQ9UBK7 228 aaPredicted RBP15.23■□□□□ 0.03
CHRNA3-207ENST00000559941 RABL2BQ9UNT1 228 aa15.23■□□□□ 0.03
CHRNA3-207ENST00000559941 IGHV7-4-1A0A0J9YVY3 117 aa15.22■□□□□ 0.03
CHRNA3-207ENST00000559941 LCE6AA0A183 80 aa15.22■□□□□ 0.03
CHRNA3-207ENST00000559941 GNG7O60262 68 aa15.22■□□□□ 0.03
CHRNA3-207ENST00000559941 IFNA17P01571 189 aa15.22■□□□□ 0.03
CHRNA3-207ENST00000559941 SNCAP37840 140 aa15.22■□□□□ 0.03
CHRNA3-207ENST00000559941 TMBIM6P55061 237 aa15.22■□□□□ 0.03
CHRNA3-207ENST00000559941 PVRIGQ6DKI7 326 aa15.22■□□□□ 0.03
CHRNA3-207ENST00000559941 FAAP20Q6NZ36 180 aa15.22■□□□□ 0.03
CHRNA3-207ENST00000559941 DIRAS2Q96HU8 199 aa15.22■□□□□ 0.03
CHRNA3-207ENST00000559941 PDCD10Q9BUL8 212 aa15.22■□□□□ 0.03
CHRNA3-207ENST00000559941 CCDC59Q9P031 241 aaKnown RBP15.22■□□□□ 0.03
CHRNA3-207ENST00000559941 UBQLN2Q9UHD9 624 aa15.22■□□□□ 0.03
CHRNA3-207ENST00000559941 DNAH1Q9P2D7 4330 aa15.22■□□□□ 0.03
CHRNA3-207ENST00000559941 A0A0G2JRQ6 117 aa15.21■□□□□ 0.03
CHRNA3-207ENST00000559941 OR4C46A6NHA9 309 aa15.21■□□□□ 0.03
CHRNA3-207ENST00000559941 DISC1C4P0D8 188 aa15.21■□□□□ 0.03
CHRNA3-207ENST00000559941 YIF1AO95070 293 aa15.21■□□□□ 0.03
CHRNA3-207ENST00000559941 ODF3L2Q3SX64 289 aa15.21■□□□□ 0.03
CHRNA3-207ENST00000559941 TMEM116Q8NCL8 245 aa15.21■□□□□ 0.03
CHRNA3-207ENST00000559941 RRNAD1Q96FB5 475 aaKnown RBP15.21■□□□□ 0.03
CHRNA3-207ENST00000559941 OVOL2Q9BRP0 275 aa15.21■□□□□ 0.03
CHRNA3-207ENST00000559941 RTBDNQ9BSG5 229 aaPredicted RBP15.21■□□□□ 0.03
CHRNA3-207ENST00000559941 RHPN1-AS1Q9BWJ2 59 aa15.21■□□□□ 0.03
CHRNA3-207ENST00000559941 C14orf166Q9Y224 244 aaKnown RBP15.21■□□□□ 0.03
CHRNA3-207ENST00000559941 CHEK1O14757 476 aa15.2■□□□□ 0.02
CHRNA3-207ENST00000559941 CDS2O95674 445 aa15.2■□□□□ 0.02
CHRNA3-207ENST00000559941 ETV6P41212 452 aa15.2■□□□□ 0.02
CHRNA3-207ENST00000559941 NPBWR1P48145 328 aa15.2■□□□□ 0.02
CHRNA3-207ENST00000559941 SUB1P53999 127 aaKnown RBP eCLIP15.2■□□□□ 0.02
CHRNA3-207ENST00000559941 IL18Q14116 193 aa15.2■□□□□ 0.02
CHRNA3-207ENST00000559941 SURF2Q15527 256 aaPredicted RBP15.2■□□□□ 0.02
CHRNA3-207ENST00000559941 DUSP18Q8NEJ0 188 aa15.2■□□□□ 0.02
CHRNA3-207ENST00000559941 GLYATL2Q8WU03 294 aa15.2■□□□□ 0.02
CHRNA3-207ENST00000559941 RNF2Q99496 336 aa15.2■□□□□ 0.02
CHRNA3-207ENST00000559941 TMEM222Q9H0R3 208 aa15.2■□□□□ 0.02
CHRNA3-207ENST00000559941 TRAV14DV4A0A0A6YYC5 116 aa15.19■□□□□ 0.02
CHRNA3-207ENST00000559941 TEX13DA0A0J9YY54 714 aaPredicted RBP15.19■□□□□ 0.02
CHRNA3-207ENST00000559941 OR5AC1P0C628 307 aa15.19■□□□□ 0.02
CHRNA3-207ENST00000559941 AKAIN1P0CW23 69 aa15.19■□□□□ 0.02
CHRNA3-207ENST00000559941 RNASE2P10153 161 aaKnown RBP15.19■□□□□ 0.02
CHRNA3-207ENST00000559941 Q6ZRM9 215 aa15.19■□□□□ 0.02
CHRNA3-207ENST00000559941 FAM219AQ8IW50 185 aa15.19■□□□□ 0.02
CHRNA3-207ENST00000559941 OR4C16Q8NGL9 310 aa15.19■□□□□ 0.02
CHRNA3-207ENST00000559941 NAA60Q9H7X0 242 aa15.19■□□□□ 0.02
CHRNA3-207ENST00000559941 GPR132Q9UNW8 380 aa15.19■□□□□ 0.02
CHRNA3-207ENST00000559941 PLECQ15149 4684 aaKnown RBP15.19■□□□□ 0.02
CHRNA3-207ENST00000559941 CORTO00230 105 aa15.18■□□□□ 0.02
CHRNA3-207ENST00000559941 TMEM50AO95807 157 aa15.18■□□□□ 0.02
CHRNA3-207ENST00000559941 HOXA1P49639 335 aaPredicted RBP15.18■□□□□ 0.02
CHRNA3-207ENST00000559941 APOC4P55056 127 aa15.18■□□□□ 0.02
CHRNA3-207ENST00000559941 AARDQ4LEZ3 155 aa15.18■□□□□ 0.02
CHRNA3-207ENST00000559941 RNASE11Q8TAA1 199 aaKnown RBP15.18■□□□□ 0.02
CHRNA3-207ENST00000559941 LHFPL5Q8TAF8 219 aa15.18■□□□□ 0.02
CHRNA3-207ENST00000559941 GINS3Q9BRX5 216 aa15.18■□□□□ 0.02
CHRNA3-207ENST00000559941 ENY2Q9NPA8 101 aa15.18■□□□□ 0.02
CHRNA3-207ENST00000559941 IGHV3-49A0A0A0MS15 119 aa15.17■□□□□ 0.02
CHRNA3-207ENST00000559941 GSTZ1O43708 216 aaPredicted RBP15.17■□□□□ 0.02
CHRNA3-207ENST00000559941 DHODHQ02127 395 aa15.17■□□□□ 0.02
CHRNA3-207ENST00000559941 BSXQ3C1V8 233 aa15.17■□□□□ 0.02
CHRNA3-207ENST00000559941 TOMM20LQ6UXN7 152 aa15.17■□□□□ 0.02
CHRNA3-207ENST00000559941 ZNF600Q6ZNG1 722 aa15.17■□□□□ 0.02
CHRNA3-207ENST00000559941 OR52E5Q8NH55 327 aa15.17■□□□□ 0.02
CHRNA3-207ENST00000559941 RBPMSQ93062 196 aaKnown RBP15.17■□□□□ 0.02
CHRNA3-207ENST00000559941 ANKRD20A5PA0PJZ0 165 aa15.16■□□□□ 0.02
CHRNA3-207ENST00000559941 UBE2CO00762 179 aa15.16■□□□□ 0.02
CHRNA3-207ENST00000559941 RPL5P46777 297 aaKnown RBP15.16■□□□□ 0.02
CHRNA3-207ENST00000559941 SPCS3P61009 180 aa15.16■□□□□ 0.02
CHRNA3-207ENST00000559941 FAM90A2PQ658T7 463 aa15.16■□□□□ 0.02
CHRNA3-207ENST00000559941 Q6ZWC4 215 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms