RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 ARL6IP5O75915 188 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 HPRT1P00492 218 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 IGLV2-14P01704 120 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 FGF2P09038 288 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 GIG44P09565 113 aaPredicted RBP3.72□□□□□ -1.81
SPG11-208ENST00000558155 UCHL1P09936 223 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 SPART-AS1P0CW21 52 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 NQO2P16083 231 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 NFYAP23511 347 aaPredicted RBP3.72□□□□□ -1.81
SPG11-208ENST00000558155 DTYMKP23919 212 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 MFAP4P55083 255 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 CLDN12P56749 244 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 FAM3BP58499 235 aaPredicted RBP3.72□□□□□ -1.81
SPG11-208ENST00000558155 BRWD1-AS2P59051 145 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 TAS2R31P59538 309 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 POLR2GP62487 172 aaKnown RBP eCLIP3.72□□□□□ -1.81
SPG11-208ENST00000558155 C21orf62-AS1Q17RA5 79 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 RGS21Q2M5E4 152 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 TIMM50Q3ZCQ8 353 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 AARDQ4LEZ3 155 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 CDPF1Q6NVV7 123 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 WDR73Q6P4I2 378 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 CNIH2Q6PI25 160 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 ZNF767PQ75MW2 155 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 ZNF367Q7RTV3 350 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 SPAG16Q8N0X2 631 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 ZBTB34Q8NCN2 500 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 OR10W1Q8NGF6 305 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 OR1L8Q8NGR8 309 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 TXN2Q99757 166 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 GINS3Q9BRX5 216 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 DCSTAMPQ9H295 470 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 MS4A6AQ9H2W1 248 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 VCXQ9H320 206 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 TMEM231Q9H6L2 316 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 TAS2R8Q9NYW2 309 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 F11RQ9Y624 299 aaKnown RBP3.72□□□□□ -1.81
SPG11-208ENST00000558155 V9GY05 133 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 X6R8D5 127 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 IGKV1D-8A0A087WSZ0 117 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 TRAV3A0A0B4J244 114 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 IGKV1D-13A0A0B4J2D9 117 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 TMEM272A0A1B0GTI8 110 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 A0A1W2PS18 150 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 TMEM189A5PLL7 270 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 NOTOA8MTQ0 251 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 EPM2AB3EWF7 344 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 MFNGO00587 321 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 CLN5O75503 358 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 INAFM2P0DMQ5 153 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 IGKV1-13P0DP09 117 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 HIST1H1DP16402 221 aaKnown RBP3.71□□□□□ -1.82
SPG11-208ENST00000558155 PCP4P48539 62 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 NUTF2P61970 127 aaKnown RBP3.71□□□□□ -1.82
SPG11-208ENST00000558155 WT1-ASQ06250 92 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 CATR1Q13166 79 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 EIF4EBP1Q13541 118 aaPredicted RBP3.71□□□□□ -1.82
SPG11-208ENST00000558155 SPHARQ15513 63 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 TRAM1Q15629 374 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 POU2AF1Q16633 256 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 CDNFQ49AH0 187 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 UBE2UQ5VVX9 321 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 ZNF773Q6PK81 442 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 AHSA2Q719I0 299 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 TRPT1Q86TN4 253 aaKnown RBP3.71□□□□□ -1.82
SPG11-208ENST00000558155 CADM3Q8N126 398 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 CSNK1G2-AS1Q8NCQ2 148 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 DMBX1Q8NFW5 382 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 CYGBQ8WWM9 190 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 ST8SIA2Q92186 375 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 LSM10Q969L4 123 aaKnown RBP3.71□□□□□ -1.82
SPG11-208ENST00000558155 SLC25A46Q96AG3 418 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 GRAMD2BQ96HH9 432 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 ZNF414Q96IQ9 312 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 TMEM56Q96MV1 263 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 GFI1Q99684 422 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 BCL7BQ9BQE9 202 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 MND1Q9BWT6 205 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 HINT2Q9BX68 163 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 C1QTNF4Q9BXJ3 329 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 CCDC90BQ9GZT6 254 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 NXF2Q9GZY0 626 aaKnown RBP3.71□□□□□ -1.82
SPG11-208ENST00000558155 VSIRQ9H7M9 311 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 PLCXD1Q9NUJ7 323 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 CLEC5AQ9NY25 188 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 FKBP11Q9NYL4 201 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 RABAC1Q9UI14 185 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 PSORS1C1Q9UIG5 152 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 CELA1Q9UNI1 258 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 TMED3Q9Y3Q3 217 aa3.71□□□□□ -1.82
SPG11-208ENST00000558155 VPS13DQ5THJ4 4388 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 TEX48A0A1B0GUV7 120 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 SMIM9A6NGZ8 99 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 KNCNA6PVL3 124 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 K7EIM0 57 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 K7EQG2 157 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 SULT1C2O00338 296 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 PDCD5O14737 125 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 TNFSF12O43508 249 aa3.7□□□□□ -1.82
SPG11-208ENST00000558155 GATCO43716 136 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms