RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 REG1AP05451 166 aa10.56□□□□□ -0.72
SHMT2-234ENST00000557703 HOXB5P09067 269 aa10.56□□□□□ -0.72
SHMT2-234ENST00000557703 C18orf65Q6ZTR6 163 aa10.56□□□□□ -0.72
SHMT2-234ENST00000557703 C12orf45Q8N5I9 185 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-234ENST00000557703 RNASEH2CQ8TDP1 164 aaKnown RBP10.56□□□□□ -0.72
SHMT2-234ENST00000557703 INMT-MINDY4F8WBC2 141 aa10.55□□□□□ -0.72
SHMT2-234ENST00000557703 GGCTO75223 188 aaKnown RBP10.55□□□□□ -0.72
SHMT2-234ENST00000557703 NDUFB8O95169 186 aa10.55□□□□□ -0.72
SHMT2-234ENST00000557703 PRH1P02810 166 aa10.55□□□□□ -0.72
SHMT2-234ENST00000557703 ID3Q02535 119 aa10.55□□□□□ -0.72
SHMT2-234ENST00000557703 KLF5Q13887 457 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-234ENST00000557703 RPEL1Q2QD12 228 aa10.55□□□□□ -0.72
SHMT2-234ENST00000557703 ETFRF1Q6IPR1 90 aa10.55□□□□□ -0.72
SHMT2-234ENST00000557703 GPHB5Q86YW7 130 aa10.55□□□□□ -0.72
SHMT2-234ENST00000557703 ZNF502Q8TBZ5 544 aa10.55□□□□□ -0.72
SHMT2-234ENST00000557703 DTD1Q8TEA8 209 aa10.55□□□□□ -0.72
SHMT2-234ENST00000557703 BSCL2Q96G97 398 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-234ENST00000557703 OR5B12Q96R08 314 aa10.55□□□□□ -0.72
SHMT2-234ENST00000557703 PRR13Q9NZ81 148 aa10.55□□□□□ -0.72
SHMT2-234ENST00000557703 RPS10-NUDT3A0A1W2PQS6 291 aa10.54□□□□□ -0.72
SHMT2-234ENST00000557703 RNASE2P10153 161 aaKnown RBP10.54□□□□□ -0.72
SHMT2-234ENST00000557703 HOXD3P31249 432 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-234ENST00000557703 NPBWR1P48145 328 aa10.54□□□□□ -0.72
SHMT2-234ENST00000557703 DCTN2Q13561 401 aaKnown RBP10.54□□□□□ -0.72
SHMT2-234ENST00000557703 DEFB136Q30KP8 78 aa10.54□□□□□ -0.72
SHMT2-234ENST00000557703 FAM106AQ4KMX7 169 aa10.54□□□□□ -0.72
SHMT2-234ENST00000557703 SLC24A4Q8NFF2 622 aa10.54□□□□□ -0.72
SHMT2-234ENST00000557703 ELOVL1Q9BW60 279 aa10.54□□□□□ -0.72
SHMT2-234ENST00000557703 C21orf62Q9NYP8 219 aa10.54□□□□□ -0.72
SHMT2-234ENST00000557703 SIGLEC8Q9NYZ4 499 aa10.54□□□□□ -0.72
SHMT2-234ENST00000557703 DMRT1Q9Y5R6 373 aa10.54□□□□□ -0.72
SHMT2-234ENST00000557703 IGHV4OR15-8A0A075B7B6 117 aa10.53□□□□□ -0.72
SHMT2-234ENST00000557703 A0A087WW49 117 aa10.53□□□□□ -0.72
SHMT2-234ENST00000557703 I3L2K1 104 aa10.53□□□□□ -0.72
SHMT2-234ENST00000557703 K7EIM0 57 aa10.53□□□□□ -0.72
SHMT2-234ENST00000557703 LGALS9O00182 355 aa10.53□□□□□ -0.72
SHMT2-234ENST00000557703 OVOL1O14753 267 aa10.53□□□□□ -0.72
SHMT2-234ENST00000557703 SYNGR2O43760 224 aa10.53□□□□□ -0.72
SHMT2-234ENST00000557703 CLEC3BP05452 202 aa10.53□□□□□ -0.72
SHMT2-234ENST00000557703 SLC25A4P12235 298 aa10.53□□□□□ -0.72
SHMT2-234ENST00000557703 NKX2-1P43699 371 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-234ENST00000557703 MFAP2P55001 183 aa10.53□□□□□ -0.72
SHMT2-234ENST00000557703 MFAP4P55083 255 aa10.53□□□□□ -0.72
SHMT2-234ENST00000557703 TAS2R30P59541 319 aa10.53□□□□□ -0.72
SHMT2-234ENST00000557703 C9orf66Q5T8R8 295 aa10.53□□□□□ -0.72
SHMT2-234ENST00000557703 HIST2H2BDQ6DRA6 164 aa10.53□□□□□ -0.72
SHMT2-234ENST00000557703 C1QL4Q86Z23 238 aa10.53□□□□□ -0.72
SHMT2-234ENST00000557703 SCARB1Q8WTV0 552 aa10.53□□□□□ -0.72
SHMT2-234ENST00000557703 CACNG8Q8WXS5 425 aa10.53□□□□□ -0.72
SHMT2-234ENST00000557703 PEMTQ9UBM1 199 aa10.53□□□□□ -0.72
SHMT2-234ENST00000557703 TRAV30A0A087WSZ9 112 aa10.52□□□□□ -0.73
SHMT2-234ENST00000557703 ANKRD34BA5PLL1 514 aa10.52□□□□□ -0.73
SHMT2-234ENST00000557703 WRBO00258 174 aa10.52□□□□□ -0.73
SHMT2-234ENST00000557703 ADAP1O75689 374 aa10.52□□□□□ -0.73
SHMT2-234ENST00000557703 SCAF4O95104 1147 aaKnown RBP10.52□□□□□ -0.73
SHMT2-234ENST00000557703 IFNA10P01566 189 aa10.52□□□□□ -0.73
SHMT2-234ENST00000557703 NPY1RP25929 384 aa10.52□□□□□ -0.73
SHMT2-234ENST00000557703 ARL3P36405 182 aa10.52□□□□□ -0.73
SHMT2-234ENST00000557703 RAB11AP62491 216 aa10.52□□□□□ -0.73
SHMT2-234ENST00000557703 CYCSP99999 105 aaKnown RBP10.52□□□□□ -0.73
SHMT2-234ENST00000557703 IAH1Q2TAA2 248 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-234ENST00000557703 SAMD5Q5TGI4 173 aa10.52□□□□□ -0.73
SHMT2-234ENST00000557703 OR4D5Q8NGN0 318 aa10.52□□□□□ -0.73
SHMT2-234ENST00000557703 MISP3Q96FF7 219 aa10.52□□□□□ -0.73
SHMT2-234ENST00000557703 CCDC140Q96MF4 163 aa10.52□□□□□ -0.73
SHMT2-234ENST00000557703 RAB40CQ96S21 281 aa10.52□□□□□ -0.73
SHMT2-234ENST00000557703 RBKSQ9H477 322 aa10.52□□□□□ -0.73
SHMT2-234ENST00000557703 BMPR1BO00238 502 aa10.51□□□□□ -0.73
SHMT2-234ENST00000557703 MT-CO2P00403 227 aa10.51□□□□□ -0.73
SHMT2-234ENST00000557703 GPX4P36969 197 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-234ENST00000557703 ELLP55199 621 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-234ENST00000557703 RELQ04864 619 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-234ENST00000557703 KPRPQ5T749 579 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-234ENST00000557703 ACSM6Q6P461 480 aa10.51□□□□□ -0.73
SHMT2-234ENST00000557703 CLEC19AQ6UXS0 136 aa10.51□□□□□ -0.73
SHMT2-234ENST00000557703 GSG1LQ6UXU4 331 aa10.51□□□□□ -0.73
SHMT2-234ENST00000557703 OR52B4Q8NGK2 314 aa10.51□□□□□ -0.73
SHMT2-234ENST00000557703 OR4X1Q8NH49 305 aa10.51□□□□□ -0.73
SHMT2-234ENST00000557703 DCUN1D4Q92564 292 aa10.51□□□□□ -0.73
SHMT2-234ENST00000557703 DLX4Q92988 240 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-234ENST00000557703 C2orf50Q96LR7 162 aa10.51□□□□□ -0.73
SHMT2-234ENST00000557703 DUX3Q96PT4 197 aa10.51□□□□□ -0.73
SHMT2-234ENST00000557703 SEC22CQ9BRL7 303 aa10.51□□□□□ -0.73
SHMT2-234ENST00000557703 MFSD2BA6NFX1 497 aa10.5□□□□□ -0.73
SHMT2-234ENST00000557703 NUPL2O15504 423 aaKnown RBP10.5□□□□□ -0.73
SHMT2-234ENST00000557703 TGOLN2O43493 480 aa10.5□□□□□ -0.73
SHMT2-234ENST00000557703 SPINK9Q5DT21 86 aa10.5□□□□□ -0.73
SHMT2-234ENST00000557703 C19orf35Q6ZS72 473 aa10.5□□□□□ -0.73
SHMT2-234ENST00000557703 REC114Q7Z4M0 266 aa10.5□□□□□ -0.73
SHMT2-234ENST00000557703 ZBTB8BQ8NAP8 495 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-234ENST00000557703 TMEM116Q8NCL8 245 aa10.5□□□□□ -0.73
SHMT2-234ENST00000557703 OR9G4Q8NGQ1 327 aa10.5□□□□□ -0.73
SHMT2-234ENST00000557703 SMIM8Q96KF7 97 aa10.5□□□□□ -0.73
SHMT2-234ENST00000557703 SORL1Q92673 2214 aa10.5□□□□□ -0.73
SHMT2-234ENST00000557703 SEC14L6B5MCN3 397 aa10.49□□□□□ -0.73
SHMT2-234ENST00000557703 NDUFA4O00483 81 aa10.49□□□□□ -0.73
SHMT2-234ENST00000557703 GNG7O60262 68 aa10.49□□□□□ -0.73
SHMT2-234ENST00000557703 OPRK1P41145 380 aa10.49□□□□□ -0.73
SHMT2-234ENST00000557703 SLURP1P55000 103 aa10.49□□□□□ -0.73
SHMT2-234ENST00000557703 RGS21Q2M5E4 152 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms