RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 GSTZ1O43708 216 aaPredicted RBP1.93□□□□□ -2.1
TRAV28-201ENST00000557548 ZNF682O95780 498 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 NRASP01111 189 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 HRASP01112 189 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 KRASP01116 189 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 IGF2P01344 180 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 IL4P05112 153 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 CSN2P05814 226 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 OR5AC1P0C628 307 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 METTL15P1P0C7V9 234 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 MUC1P15941 1255 aaPredicted RBP1.93□□□□□ -2.1
TRAV28-201ENST00000557548 RPS4Y1P22090 263 aaKnown RBP1.93□□□□□ -2.1
TRAV28-201ENST00000557548 PPIBP23284 216 aaKnown RBP1.93□□□□□ -2.1
TRAV28-201ENST00000557548 CNTFRP26992 372 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 BLVRBP30043 206 aaPredicted RBP1.93□□□□□ -2.1
TRAV28-201ENST00000557548 GABRA3P34903 492 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 PSMB3P49720 205 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 RBP2P50120 134 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 DEFA1P59665 94 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 HERVK_113P63121 156 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 MRPS10P82664 201 aaKnown RBP1.93□□□□□ -2.1
TRAV28-201ENST00000557548 TNFAIP6P98066 277 aaPredicted RBP1.93□□□□□ -2.1
TRAV28-201ENST00000557548 GNA12Q03113 381 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 MMDQ15546 238 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 NEDD8Q15843 81 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 MORN2Q502X0 79 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 TNFAIP8L3Q5GJ75 292 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 LAIR2Q6ISS4 152 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 PRSS54Q6PEW0 395 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 DAZ4Q86SG3 579 aaKnown RBP1.93□□□□□ -2.1
TRAV28-201ENST00000557548 SGPP2Q8IWX5 399 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 TMEM86AQ8N2M4 240 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 SPANXA2-OT1Q8N9U9 137 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 TMEM75Q8N9X5 138 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 SLC30A7Q8NEW0 376 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 TSTD1Q8NFU3 115 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 OR2T27Q8NH04 317 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 ARL11Q969Q4 196 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 STARD4Q96DR4 205 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 MS4A6EQ96DS6 147 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 NMNAT3Q96T66 252 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 MED28Q9H204 178 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 OR2D2Q9H210 308 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 GPR84Q9NQS5 396 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 DAZ1Q9NQZ3 744 aaKnown RBP1.93□□□□□ -2.1
TRAV28-201ENST00000557548 KCNIP2Q9NS61 270 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 COA4Q9NYJ1 87 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 SLC23A2Q9UGH3 650 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 U3KQ87 197 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 ANKRD12Q6UB98 2062 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 TOGARAM1Q9Y4F4 1720 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 ROBO3Q96MS0 1386 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 TMEM2Q9UHN6 1383 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 BCL9LQ86UU0 1499 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 PXDNQ92626 1479 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 CDC42BPGQ6DT37 1551 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 NRKQ7Z2Y5 1582 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 NOTCH3Q9UM47 2321 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 TNS3Q68CZ2 1445 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 ERBINQ96RT1 1412 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 NACAE9PAV3 2078 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 MON2Q7Z3U7 1717 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 DOCK3Q8IZD9 2030 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 TRBV19A0A075B6N1 114 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 IGHV1-45A0A0A0MS14 117 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 TMED7-TICAM2A0A0A6YYA0 188 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 IZUMO1RA6ND01 250 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 H3BSA7 217 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 J3QRK9 145 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 SLC22A1O15245 554 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 WISP3O95389 354 aaPredicted RBP1.92□□□□□ -2.1
TRAV28-201ENST00000557548 APOMO95445 188 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 LHBP01229 141 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 IGHV1-46P01743 117 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 RPL7P18124 248 aaKnown RBP1.92□□□□□ -2.1
TRAV28-201ENST00000557548 EVI2AP22794 236 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 CMPK1P30085 196 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 SRIP30626 198 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 NUDT2P50583 147 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 POLR2HP52434 150 aaKnown RBP1.92□□□□□ -2.1
TRAV28-201ENST00000557548 GABARAPL2P60520 117 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 NCS1P62166 190 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 PSG9Q00887 426 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 CST6Q15828 149 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 TAF9Q16594 264 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 FAM104BQ5XKR9 115 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 ZNF880Q6PDB4 577 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 UNQ9165/PRO28630Q6UXU0 137 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 OR8I2Q8N0Y5 310 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 NUP35Q8NFH5 326 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 OR13C8Q8NGS7 320 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 SLC7A6Q92536 515 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 KLK6Q92876 244 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 RBPMSQ93062 196 aaKnown RBP1.92□□□□□ -2.1
TRAV28-201ENST00000557548 C14orf144Q96I85 54 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 IP6K3Q96PC2 410 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 PEBP4Q96S96 227 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 ZNF471Q9BX82 626 aaPredicted RBP1.92□□□□□ -2.1
TRAV28-201ENST00000557548 GTSF1LQ9H1H1 148 aa1.92□□□□□ -2.1
TRAV28-201ENST00000557548 CACYBPQ9HB71 228 aaKnown RBP1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms