RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 RNASE7Q9H1E1 156 aaKnown RBP13.32□□□□□ -0.28
SHMT2-232ENST00000557487 SLC35D1Q9NTN3 355 aa13.32□□□□□ -0.28
SHMT2-232ENST00000557487 BET1LQ9NYM9 111 aa13.32□□□□□ -0.28
SHMT2-232ENST00000557487 CBY1Q9Y3M2 126 aa13.32□□□□□ -0.28
SHMT2-232ENST00000557487 GGTLC3B5MD39 225 aa13.31□□□□□ -0.28
SHMT2-232ENST00000557487 INS-IGF2F8WCM5 200 aa13.31□□□□□ -0.28
SHMT2-232ENST00000557487 IGHV3-13P01766 116 aa13.31□□□□□ -0.28
SHMT2-232ENST00000557487 ZNF83P51522 516 aa13.31□□□□□ -0.28
SHMT2-232ENST00000557487 ZNF714Q96N38 554 aa13.31□□□□□ -0.28
SHMT2-232ENST00000557487 FAM103A1Q9BTL3 118 aaKnown RBP13.31□□□□□ -0.28
SHMT2-232ENST00000557487 TET2Q6N021 2002 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-232ENST00000557487 SRIP30626 198 aa13.31□□□□□ -0.28
SHMT2-232ENST00000557487 SELENOVP59797 346 aa13.31□□□□□ -0.28
SHMT2-232ENST00000557487 C3orf36Q3SXR2 165 aa13.31□□□□□ -0.28
SHMT2-232ENST00000557487 VWA1Q6PCB0 445 aa13.31□□□□□ -0.28
SHMT2-232ENST00000557487 C1orf229Q6ZS94 237 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-232ENST00000557487 C9orf106Q8NAJ2 232 aa13.31□□□□□ -0.28
SHMT2-232ENST00000557487 ZNRF1Q8ND25 227 aa13.31□□□□□ -0.28
SHMT2-232ENST00000557487 BORCS7Q96B45 105 aa13.31□□□□□ -0.28
SHMT2-232ENST00000557487 DPRXA6NFQ7 191 aa13.3□□□□□ -0.28
SHMT2-232ENST00000557487 GATA4P43694 442 aa13.3□□□□□ -0.28
SHMT2-232ENST00000557487 CD69Q07108 199 aa13.3□□□□□ -0.28
SHMT2-232ENST00000557487 BHLHA15Q7RTS1 189 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-232ENST00000557487 LYG1Q8N1E2 194 aa13.3□□□□□ -0.28
SHMT2-232ENST00000557487 OR2V2Q96R30 315 aa13.3□□□□□ -0.28
SHMT2-232ENST00000557487 HINT2Q9BX68 163 aa13.3□□□□□ -0.28
SHMT2-232ENST00000557487 GCM1Q9NP62 436 aa13.3□□□□□ -0.28
SHMT2-232ENST00000557487 ZNF71Q9NQZ8 489 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-232ENST00000557487 KNTC1P50748 2209 aa13.3□□□□□ -0.28
SHMT2-232ENST00000557487 FRMD6-AS1P0C7T7 363 aa13.29□□□□□ -0.28
SHMT2-232ENST00000557487 IGLC2P0DOY2 106 aa13.29□□□□□ -0.28
SHMT2-232ENST00000557487 IGLC3P0DOY3 106 aa13.29□□□□□ -0.28
SHMT2-232ENST00000557487 PMCHP20382 165 aa13.29□□□□□ -0.28
SHMT2-232ENST00000557487 KLF5Q13887 457 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-232ENST00000557487 FAM162BQ5T6X4 162 aa13.29□□□□□ -0.28
SHMT2-232ENST00000557487 ASCL3Q9NQ33 180 aa13.29□□□□□ -0.28
SHMT2-232ENST00000557487 PROCRQ9UNN8 238 aa13.29□□□□□ -0.28
SHMT2-232ENST00000557487 SLC25A15Q9Y619 301 aa13.29□□□□□ -0.28
SHMT2-232ENST00000557487 IGHV3OR15-7A0A075B7D8 119 aa13.29□□□□□ -0.28
SHMT2-232ENST00000557487 A6NNC1 897 aa13.29□□□□□ -0.28
SHMT2-232ENST00000557487 AHRRA9YTQ3 701 aa13.29□□□□□ -0.28
SHMT2-232ENST00000557487 USF1P22415 310 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-232ENST00000557487 MOGAT3Q86VF5 341 aa13.29□□□□□ -0.28
SHMT2-232ENST00000557487 NIT1Q86X76 327 aa13.29□□□□□ -0.28
SHMT2-232ENST00000557487 OR1L4Q8NGR5 311 aa13.29□□□□□ -0.28
SHMT2-232ENST00000557487 TSKUQ8WUA8 353 aa13.29□□□□□ -0.28
SHMT2-232ENST00000557487 SMIM12Q96EX1 92 aa13.29□□□□□ -0.28
SHMT2-232ENST00000557487 GRAMD2BQ96HH9 432 aa13.29□□□□□ -0.28
SHMT2-232ENST00000557487 IGKV1OR2-108A0A075B7D4 117 aa13.28□□□□□ -0.28
SHMT2-232ENST00000557487 TEX50A0A1B0GTY4 177 aa13.28□□□□□ -0.28
SHMT2-232ENST00000557487 NPSP0C0P6 89 aa13.28□□□□□ -0.28
SHMT2-232ENST00000557487 C3orf79P0CE67 100 aa13.28□□□□□ -0.28
SHMT2-232ENST00000557487 RNASE2P10153 161 aaKnown RBP13.28□□□□□ -0.28
SHMT2-232ENST00000557487 MGST1P10620 155 aaKnown RBP13.28□□□□□ -0.28
SHMT2-232ENST00000557487 HNRNPA3P51991 378 aaKnown RBP13.28□□□□□ -0.28
SHMT2-232ENST00000557487 FXYD3Q14802 87 aa13.28□□□□□ -0.28
SHMT2-232ENST00000557487 SLC25A48Q6ZT89 311 aaKnown RBP13.28□□□□□ -0.28
SHMT2-232ENST00000557487 OSR1Q8TAX0 266 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-232ENST00000557487 MBD6Q96DN6 1003 aa13.28□□□□□ -0.28
SHMT2-232ENST00000557487 DNAJC4Q9NNZ3 241 aa13.28□□□□□ -0.28
SHMT2-232ENST00000557487 SERTAD4Q9NUC0 356 aa13.28□□□□□ -0.28
SHMT2-232ENST00000557487 MRPS16Q9Y3D3 137 aaKnown RBP13.28□□□□□ -0.28
SHMT2-232ENST00000557487 MED13Q9UHV7 2174 aa13.27□□□□□ -0.28
SHMT2-232ENST00000557487 HYPMO75409 117 aa13.27□□□□□ -0.28
SHMT2-232ENST00000557487 IGHV3-7P01780 117 aa13.27□□□□□ -0.28
SHMT2-232ENST00000557487 GLRXP35754 106 aa13.27□□□□□ -0.28
SHMT2-232ENST00000557487 KLF3P57682 345 aaPredicted RBP13.27□□□□□ -0.28
SHMT2-232ENST00000557487 UBE2L3P68036 154 aaKnown RBP13.27□□□□□ -0.28
SHMT2-232ENST00000557487 BATFQ16520 125 aa13.27□□□□□ -0.28
SHMT2-232ENST00000557487 ATP5L2Q7Z4Y8 100 aa13.27□□□□□ -0.28
SHMT2-232ENST00000557487 RCHY1Q96PM5 261 aa13.27□□□□□ -0.28
SHMT2-232ENST00000557487 TXN2Q99757 166 aa13.27□□□□□ -0.28
SHMT2-232ENST00000557487 SAP30LQ9HAJ7 183 aa13.27□□□□□ -0.28
SHMT2-232ENST00000557487 RNF114Q9Y508 228 aa13.27□□□□□ -0.28
SHMT2-232ENST00000557487 PSMB11A5LHX3 300 aa13.27□□□□□ -0.29
SHMT2-232ENST00000557487 OR2J3O76001 311 aa13.27□□□□□ -0.29
SHMT2-232ENST00000557487 CHRNB4P30926 498 aa13.27□□□□□ -0.29
SHMT2-232ENST00000557487 ERHP84090 104 aaKnown RBP13.27□□□□□ -0.29
SHMT2-232ENST00000557487 KIAA1644Q3SXP7 199 aa13.27□□□□□ -0.29
SHMT2-232ENST00000557487 STUMQ69YW2 141 aa13.27□□□□□ -0.29
SHMT2-232ENST00000557487 MRPL54Q6P161 138 aaKnown RBP13.27□□□□□ -0.29
SHMT2-232ENST00000557487 FAM167A-AS1Q96KT0 104 aa13.27□□□□□ -0.29
SHMT2-232ENST00000557487 RNF7Q9UBF6 113 aa13.27□□□□□ -0.29
SHMT2-232ENST00000557487 LAMTOR2Q9Y2Q5 125 aa13.27□□□□□ -0.29
SHMT2-232ENST00000557487 A0A1W2PN81 502 aa13.26□□□□□ -0.29
SHMT2-232ENST00000557487 SPINK4O60575 86 aa13.26□□□□□ -0.29
SHMT2-232ENST00000557487 CT45A6P0DMU7 189 aa13.26□□□□□ -0.29
SHMT2-232ENST00000557487 CT45A5P0DMU8 189 aa13.26□□□□□ -0.29
SHMT2-232ENST00000557487 CT45A7P0DMV0 189 aa13.26□□□□□ -0.29
SHMT2-232ENST00000557487 TCL1AP56279 114 aa13.26□□□□□ -0.29
SHMT2-232ENST00000557487 BPIFB3P59826 476 aa13.26□□□□□ -0.29
SHMT2-232ENST00000557487 Q6ZN92 141 aa13.26□□□□□ -0.29
SHMT2-232ENST00000557487 OR4A5Q8NH83 315 aa13.26□□□□□ -0.29
SHMT2-232ENST00000557487 C18orf32Q8TCD1 76 aa13.26□□□□□ -0.29
SHMT2-232ENST00000557487 ORAOV1Q8WV07 137 aa13.26□□□□□ -0.29
SHMT2-232ENST00000557487 LEAP2Q969E1 77 aa13.26□□□□□ -0.29
SHMT2-232ENST00000557487 SLC25A2Q9BXI2 301 aa13.26□□□□□ -0.29
SHMT2-232ENST00000557487 RPUSD1Q9UJJ7 312 aaKnown RBP13.26□□□□□ -0.29
SHMT2-232ENST00000557487 AMMECR1Q9Y4X0 333 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-232ENST00000557487 AHCTF1Q8WYP5 2266 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms