RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 TOMM5Q8N4H5 51 aa13.57□□□□□ -0.24
XRCC3-217ENST00000556980 LHFPL5Q8TAF8 219 aa13.57□□□□□ -0.24
XRCC3-217ENST00000556980 TMEM190Q8WZ59 177 aa13.57□□□□□ -0.24
XRCC3-217ENST00000556980 TRIM63Q969Q1 353 aa13.57□□□□□ -0.24
XRCC3-217ENST00000556980 WWC2-AS2Q96NR7 200 aa13.57□□□□□ -0.24
XRCC3-217ENST00000556980 TUBA4BQ9H853 241 aa13.57□□□□□ -0.24
XRCC3-217ENST00000556980 C19orf73Q9NVV2 129 aa13.57□□□□□ -0.24
XRCC3-217ENST00000556980 MLXQ9UH92 298 aa13.57□□□□□ -0.24
XRCC3-217ENST00000556980 F8W735 103 aaPredicted RBP13.56□□□□□ -0.24
XRCC3-217ENST00000556980 I3L2K1 104 aa13.56□□□□□ -0.24
XRCC3-217ENST00000556980 NDUFA4O00483 81 aa13.56□□□□□ -0.24
XRCC3-217ENST00000556980 NUPL2O15504 423 aaKnown RBP13.56□□□□□ -0.24
XRCC3-217ENST00000556980 MT-CO2P00403 227 aa13.56□□□□□ -0.24
XRCC3-217ENST00000556980 ETV6P41212 452 aa13.56□□□□□ -0.24
XRCC3-217ENST00000556980 MFAP4P55083 255 aa13.56□□□□□ -0.24
XRCC3-217ENST00000556980 ELLP55199 621 aaPredicted RBP13.56□□□□□ -0.24
XRCC3-217ENST00000556980 KLF9Q13886 244 aaPredicted RBP13.56□□□□□ -0.24
XRCC3-217ENST00000556980 ZNF79Q15937 498 aa13.56□□□□□ -0.24
XRCC3-217ENST00000556980 SPANXN2Q5MJ10 180 aa13.56□□□□□ -0.24
XRCC3-217ENST00000556980 BTNL8Q6UX41 500 aa13.56□□□□□ -0.24
XRCC3-217ENST00000556980 SELENOHQ8IZQ5 122 aaKnown RBP13.56□□□□□ -0.24
XRCC3-217ENST00000556980 TMEM61Q8N0U2 210 aa13.56□□□□□ -0.24
XRCC3-217ENST00000556980 WDR89Q96FK6 387 aaPredicted RBP13.56□□□□□ -0.24
XRCC3-217ENST00000556980 NEURL2Q9BR09 285 aa13.56□□□□□ -0.24
XRCC3-217ENST00000556980 CHRDL1Q9BU40 450 aa13.56□□□□□ -0.24
XRCC3-217ENST00000556980 C20orf24Q9BUV8 137 aa13.56□□□□□ -0.24
XRCC3-217ENST00000556980 KCNIP3Q9Y2W7 256 aa13.56□□□□□ -0.24
XRCC3-217ENST00000556980 ZNF785A8K8V0 405 aa13.55□□□□□ -0.24
XRCC3-217ENST00000556980 INS-IGF2F8WCM5 200 aa13.55□□□□□ -0.24
XRCC3-217ENST00000556980 IGHV3-48P01763 117 aa13.55□□□□□ -0.24
XRCC3-217ENST00000556980 AKR1C4P17516 323 aa13.55□□□□□ -0.24
XRCC3-217ENST00000556980 ADMP35318 185 aa13.55□□□□□ -0.24
XRCC3-217ENST00000556980 SUB1P53999 127 aaKnown RBP eCLIP13.55□□□□□ -0.24
XRCC3-217ENST00000556980 RELQ04864 619 aaPredicted RBP13.55□□□□□ -0.24
XRCC3-217ENST00000556980 CCDC190Q86UF4 302 aa13.55□□□□□ -0.24
XRCC3-217ENST00000556980 TMEM230Q96A57 120 aa13.55□□□□□ -0.24
XRCC3-217ENST00000556980 TXN2Q99757 166 aa13.55□□□□□ -0.24
XRCC3-217ENST00000556980 ZMAT4Q9H898 229 aa13.55□□□□□ -0.24
XRCC3-217ENST00000556980 DAZ1Q9NQZ3 744 aaKnown RBP13.55□□□□□ -0.24
XRCC3-217ENST00000556980 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.55□□□□□ -0.24
XRCC3-217ENST00000556980 MRPL27Q9P0M9 148 aaKnown RBP13.55□□□□□ -0.24
XRCC3-217ENST00000556980 CACNG5Q9UF02 275 aa13.55□□□□□ -0.24
XRCC3-217ENST00000556980 CTSGP08311 255 aa13.54□□□□□ -0.24
XRCC3-217ENST00000556980 C8orf88P0DMB2 117 aa13.54□□□□□ -0.24
XRCC3-217ENST00000556980 Q6ZRM9 215 aa13.54□□□□□ -0.24
XRCC3-217ENST00000556980 IL22RA2Q969J5 263 aa13.54□□□□□ -0.24
XRCC3-217ENST00000556980 RCHY1Q96PM5 261 aa13.54□□□□□ -0.24
XRCC3-217ENST00000556980 TMEM56-RWDD3S4R434 201 aa13.54□□□□□ -0.24
XRCC3-217ENST00000556980 CORTO00230 105 aa13.53□□□□□ -0.24
XRCC3-217ENST00000556980 GNG7O60262 68 aa13.53□□□□□ -0.24
XRCC3-217ENST00000556980 SCAF4O95104 1147 aaKnown RBP13.53□□□□□ -0.24
XRCC3-217ENST00000556980 CD7P09564 240 aa13.53□□□□□ -0.24
XRCC3-217ENST00000556980 ANXA3P12429 323 aa13.53□□□□□ -0.24
XRCC3-217ENST00000556980 FCGR2BP31994 310 aaPredicted RBP13.53□□□□□ -0.24
XRCC3-217ENST00000556980 SPCS3P61009 180 aa13.53□□□□□ -0.24
XRCC3-217ENST00000556980 TMEM187Q14656 261 aa13.53□□□□□ -0.24
XRCC3-217ENST00000556980 AARDQ4LEZ3 155 aa13.53□□□□□ -0.24
XRCC3-217ENST00000556980 RBPMS2Q6ZRY4 209 aaKnown RBP13.53□□□□□ -0.24
XRCC3-217ENST00000556980 SLC16A13Q7RTY0 426 aa13.53□□□□□ -0.24
XRCC3-217ENST00000556980 TMED4Q7Z7H5 227 aa13.53□□□□□ -0.24
XRCC3-217ENST00000556980 GPR146Q96CH1 333 aa13.53□□□□□ -0.24
XRCC3-217ENST00000556980 GALNT14Q96FL9 552 aa13.53□□□□□ -0.24
XRCC3-217ENST00000556980 PRR13Q9NZ81 148 aa13.53□□□□□ -0.24
XRCC3-217ENST00000556980 IGHV3OR16-8A0A075B7F1 116 aa13.52□□□□□ -0.25
XRCC3-217ENST00000556980 YIF1AO95070 293 aa13.52□□□□□ -0.25
XRCC3-217ENST00000556980 RNASE2P10153 161 aaKnown RBP13.52□□□□□ -0.25
XRCC3-217ENST00000556980 SRPXP78539 464 aa13.52□□□□□ -0.25
XRCC3-217ENST00000556980 DUSP18Q8NEJ0 188 aa13.52□□□□□ -0.25
XRCC3-217ENST00000556980 OR52E5Q8NH55 327 aa13.52□□□□□ -0.25
XRCC3-217ENST00000556980 DEDD2Q8WXF8 326 aa13.52□□□□□ -0.25
XRCC3-217ENST00000556980 TRAV25A0A0B4J276 109 aa13.51□□□□□ -0.25
XRCC3-217ENST00000556980 C15orf62A8K5M9 175 aa13.51□□□□□ -0.25
XRCC3-217ENST00000556980 CEBPZOSA8MTT3 80 aa13.51□□□□□ -0.25
XRCC3-217ENST00000556980 ZNF207O43670 478 aaKnown RBP13.51□□□□□ -0.25
XRCC3-217ENST00000556980 NPBWR1P48145 328 aa13.51□□□□□ -0.25
XRCC3-217ENST00000556980 INPP1P49441 399 aa13.51□□□□□ -0.25
XRCC3-217ENST00000556980 ANKRD55Q3KP44 614 aa13.51□□□□□ -0.25
XRCC3-217ENST00000556980 OR52B4Q8NGK2 314 aa13.51□□□□□ -0.25
XRCC3-217ENST00000556980 HEYLQ9NQ87 328 aaPredicted RBP13.51□□□□□ -0.25
XRCC3-217ENST00000556980 CACFD1Q9UGQ2 172 aa13.51□□□□□ -0.25
XRCC3-217ENST00000556980 DNAH9Q9NYC9 4486 aa13.51□□□□□ -0.25
XRCC3-217ENST00000556980 OR11H12B2RN74 326 aa13.5□□□□□ -0.25
XRCC3-217ENST00000556980 K7EMT4 169 aa13.5□□□□□ -0.25
XRCC3-217ENST00000556980 SULT1A3P0DMM9 295 aa13.5□□□□□ -0.25
XRCC3-217ENST00000556980 SULT1A4P0DMN0 295 aa13.5□□□□□ -0.25
XRCC3-217ENST00000556980 OPRK1P41145 380 aa13.5□□□□□ -0.25
XRCC3-217ENST00000556980 HTR2BP41595 481 aa13.5□□□□□ -0.25
XRCC3-217ENST00000556980 SUPT4H1P63272 117 aaKnown RBP13.5□□□□□ -0.25
XRCC3-217ENST00000556980 PVRIGQ6DKI7 326 aa13.5□□□□□ -0.25
XRCC3-217ENST00000556980 LGI3Q8N145 548 aa13.5□□□□□ -0.25
XRCC3-217ENST00000556980 DEFB125Q8N687 156 aa13.5□□□□□ -0.25
XRCC3-217ENST00000556980 SLC25A21Q9BQT8 299 aaPredicted RBP13.5□□□□□ -0.25
XRCC3-217ENST00000556980 TM2D3Q9BRN9 247 aa13.5□□□□□ -0.25
XRCC3-217ENST00000556980 SRRQ9GZT4 340 aa13.5□□□□□ -0.25
XRCC3-217ENST00000556980 A0A0B4J2A0 478 aa13.49□□□□□ -0.25
XRCC3-217ENST00000556980 PIGBOS1A0A0B4J2F0 54 aa13.49□□□□□ -0.25
XRCC3-217ENST00000556980 NXPH3O95157 252 aa13.49□□□□□ -0.25
XRCC3-217ENST00000556980 HAGHQ16775 308 aa13.49□□□□□ -0.25
XRCC3-217ENST00000556980 BSXQ3C1V8 233 aa13.49□□□□□ -0.25
XRCC3-217ENST00000556980 TRIQKQ629K1 86 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms