RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 TMEM182Q6ZP80 229 aaPredicted RBP8.06□□□□□ -1.12
NEK9-205ENST00000555405 SLC51BQ86UW2 128 aa8.06□□□□□ -1.12
NEK9-205ENST00000555405 NPIPB3Q92617 1050 aa8.06□□□□□ -1.12
NEK9-205ENST00000555405 A6NDX4 124 aa8.06□□□□□ -1.12
NEK9-205ENST00000555405 NDUFA3O95167 84 aa8.06□□□□□ -1.12
NEK9-205ENST00000555405 SSBP2P81877 361 aaPredicted RBP8.06□□□□□ -1.12
NEK9-205ENST00000555405 MRPL41Q8IXM3 137 aaKnown RBP8.06□□□□□ -1.12
NEK9-205ENST00000555405 ZNF709Q8N972 641 aa8.06□□□□□ -1.12
NEK9-205ENST00000555405 OR52E5Q8NH55 327 aa8.06□□□□□ -1.12
NEK9-205ENST00000555405 TMEM170AQ8WVE7 144 aa8.06□□□□□ -1.12
NEK9-205ENST00000555405 ZFP92A6NM28 416 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 YIF1AO95070 293 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 SNRPCP09234 159 aaKnown RBP8.05□□□□□ -1.12
NEK9-205ENST00000555405 TPT1P13693 172 aaKnown RBP8.05□□□□□ -1.12
NEK9-205ENST00000555405 RND2P52198 227 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 EBI3Q14213 229 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 C10orf99Q6UWK7 81 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 BAP18Q8IXM2 172 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 Q8N6K4 173 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 GNB4Q9HAV0 340 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 DOK5Q9P104 306 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 MT-CO2P00403 227 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 AMY1AP04745 511 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 IFITM2Q01629 132 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 EXOSC2Q13868 293 aaKnown RBP8.05□□□□□ -1.12
NEK9-205ENST00000555405 PDLIM3Q53GG5 364 aaPredicted RBP8.05□□□□□ -1.12
NEK9-205ENST00000555405 TMEM14EPQ6UXP3 125 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 Q6YL49 198 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 OR2G3Q8NGZ4 309 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 ZNF418Q8TF45 676 aaPredicted RBP8.05□□□□□ -1.12
NEK9-205ENST00000555405 SLC35E1Q96K37 410 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 VPREB3Q9UKI3 123 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 TEX22C9J3V5 150 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 BTNL8Q6UX41 500 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 ZNF680Q8NEM1 530 aa8.05□□□□□ -1.12
NEK9-205ENST00000555405 AGPAT2O15120 278 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 ATP6V0CP27449 155 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 ZNF616Q08AN1 781 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 Q56UQ5 140 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 ATP5SQ99766 215 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 AKAP9Q99996 3911 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 JTBO76095 146 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 LYL1P12980 280 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 FHITP49789 147 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 MFAP2P55001 183 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 ZNF266Q14584 549 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 CENPVQ7Z7K6 275 aaPredicted RBP8.04□□□□□ -1.12
NEK9-205ENST00000555405 OR5R1Q8NH85 324 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 PBDC1Q9BVG4 233 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 FNDC4Q9H6D8 234 aaPredicted RBP8.04□□□□□ -1.12
NEK9-205ENST00000555405 CYTL1Q9NRR1 136 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 FBXL7Q9UJT9 491 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 SELENOKQ9Y6D0 94 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 SORL1Q92673 2214 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 TRAV41A0A0B4J266 112 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 DNAJC9-AS1A6NH13 148 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 DFFBO76075 338 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 BPIFB3P59826 476 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 RAB14P61106 215 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 TMEM147Q9BVK8 224 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 C11orf1Q9H5F2 150 aa8.04□□□□□ -1.12
NEK9-205ENST00000555405 HLA-DRB1P01911 266 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 TRGV3P03979 118 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 MAS1LP35410 378 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 TAS2R30P59541 319 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 ZNF345Q14585 488 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 TEX261Q6UWH6 196 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 NPFFR1Q9GZQ6 430 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 ESM1Q9NQ30 184 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 MRPL36Q9P0J6 103 aaKnown RBP8.03□□□□□ -1.12
NEK9-205ENST00000555405 CDC42EP3Q9UKI2 254 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 ANKRD34BA5PLL1 514 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 NDUFB8O95169 186 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 IFNA7P01567 189 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 OR10J1P30954 320 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 CAMLGP49069 296 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 TPPP2P59282 170 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 MIC13Q5XKP0 118 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 SLC16A13Q7RTY0 426 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 FAM213BQ8TBF2 198 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 PRSS22Q9GZN4 317 aa8.03□□□□□ -1.12
NEK9-205ENST00000555405 F11RQ9Y624 299 aaKnown RBP8.03□□□□□ -1.12
NEK9-205ENST00000555405 MFSD2BA6NFX1 497 aa8.02□□□□□ -1.12
NEK9-205ENST00000555405 TAAR5O14804 337 aa8.02□□□□□ -1.12
NEK9-205ENST00000555405 EIF5AP63241 154 aaKnown RBP8.02□□□□□ -1.12
NEK9-205ENST00000555405 RHOGP84095 191 aa8.02□□□□□ -1.12
NEK9-205ENST00000555405 TEX29Q8N6K0 151 aa8.02□□□□□ -1.12
NEK9-205ENST00000555405 CACFD1Q9UGQ2 172 aa8.02□□□□□ -1.12
NEK9-205ENST00000555405 UBQLN2Q9UHD9 624 aa8.02□□□□□ -1.12
NEK9-205ENST00000555405 ZNF705EA8MWA4 302 aaPredicted RBP8.02□□□□□ -1.13
NEK9-205ENST00000555405 FSHBP01225 129 aa8.02□□□□□ -1.13
NEK9-205ENST00000555405 EGR2P11161 476 aaPredicted RBP8.02□□□□□ -1.13
NEK9-205ENST00000555405 UBA52P62987 128 aaKnown RBP8.02□□□□□ -1.13
NEK9-205ENST00000555405 GAMTQ14353 236 aa8.02□□□□□ -1.13
NEK9-205ENST00000555405 GCSAMLQ5JQS6 135 aa8.02□□□□□ -1.13
NEK9-205ENST00000555405 AKR1C8PQ5T2L2 129 aa8.02□□□□□ -1.13
NEK9-205ENST00000555405 ASPHD1Q5U4P2 390 aa8.02□□□□□ -1.13
NEK9-205ENST00000555405 GON7Q9BXV9 100 aa8.02□□□□□ -1.13
NEK9-205ENST00000555405 KLK15Q9H2R5 256 aa8.02□□□□□ -1.13
NEK9-205ENST00000555405 OR2T8A6NH00 312 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms