RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 ZNF714Q96N38 554 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 RARRES2Q99969 163 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 QTRT1Q9BXR0 403 aaKnown RBP8.96□□□□□ -0.98
SHMT2-216ENST00000554975 TNFRSF19Q9NS68 423 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 SLC35D1Q9NTN3 355 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 SLC25A10Q9UBX3 287 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-216ENST00000554975 TENM3Q9P273 2699 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 TRBV23-1A0A0A0MS06 115 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 PPIAL4CA0A0B4J2A2 164 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 A0A1W2PPH5 198 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 F6UZH7 168 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 TIMM23O14925 209 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 HOXA3O43365 443 aaPredicted RBP8.95□□□□□ -0.98
SHMT2-216ENST00000554975 NDUFB3O43676 98 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 KBTBD11O94819 623 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 MT-CO2P00403 227 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 TFF1P04155 84 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 VDAC2P45880 294 aaPredicted RBP8.95□□□□□ -0.98
SHMT2-216ENST00000554975 CEBPGP53567 150 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 HSPE1P61604 102 aaKnown RBP8.95□□□□□ -0.98
SHMT2-216ENST00000554975 ZNF726P1Q15940 193 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 RPL39P5Q59GN2 51 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 FAM90A2PQ658T7 463 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 HEPN1Q6WQI6 88 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 OR5B3Q8NH48 314 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 OR4A5Q8NH83 315 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 FAM110DQ8TAY7 271 aaPredicted RBP8.95□□□□□ -0.98
SHMT2-216ENST00000554975 C20orf24Q9BUV8 137 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 SAV1Q9H4B6 383 aaPredicted RBP8.95□□□□□ -0.98
SHMT2-216ENST00000554975 SLC25A22Q9H936 323 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 PLEKHA3Q9HB20 300 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 TMEM14BQ9NUH8 114 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 BET1LQ9NYM9 111 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 C1RLQ9NZP8 487 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 MIOXQ9UGB7 285 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 NAT8Q9UHE5 227 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 ARL2-SNX15V9GYD0 113 aa8.95□□□□□ -0.98
SHMT2-216ENST00000554975 A0A1W2PPE2 198 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 A0A1W2PPV4 95 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 ZNF727A8MUV8 499 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 PDE6DO43924 150 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 FSTL3O95633 263 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 GYPAP02724 150 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 OPN1MWP04001 364 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 OPN1MW2P0DN77 364 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 OPN1MW3P0DN78 364 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 NDUFB7P17568 137 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 HNF4GQ14541 408 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 SSX2Q16385 188 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 CT45A1Q5HYN5 189 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 OR4A47Q6IF82 309 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 ACSM6Q6P461 480 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 ZNF833PQ6ZTB9 187 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 SSX9Q7RTT3 188 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 LINC00311Q8N616 119 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 FAM216BQ8N7L0 139 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 OR8B3Q8NGG8 313 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 CT45A3Q8NHU0 189 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 OR8B2Q96RD0 313 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 CCL13Q99616 98 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 SMIM7Q9BQ49 75 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 SSBP3Q9BWW4 388 aaPredicted RBP8.94□□□□□ -0.98
SHMT2-216ENST00000554975 KAAG1Q9UBP8 84 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 INSIG2Q9Y5U4 225 aa8.94□□□□□ -0.98
SHMT2-216ENST00000554975 A0A1B0GUS0 222 aa8.93□□□□□ -0.98
SHMT2-216ENST00000554975 A0A1W2PN81 502 aa8.93□□□□□ -0.98
SHMT2-216ENST00000554975 CLPSL1A2RUU4 121 aa8.93□□□□□ -0.98
SHMT2-216ENST00000554975 CHRNA7P36544 502 aa8.93□□□□□ -0.98
SHMT2-216ENST00000554975 RND2P52198 227 aa8.93□□□□□ -0.98
SHMT2-216ENST00000554975 RPL31P62899 125 aaKnown RBP8.93□□□□□ -0.98
SHMT2-216ENST00000554975 HOXA4Q00056 320 aaPredicted RBP8.93□□□□□ -0.98
SHMT2-216ENST00000554975 PRCDQ00LT1 54 aa8.93□□□□□ -0.98
SHMT2-216ENST00000554975 LYPD2Q6UXB3 125 aa8.93□□□□□ -0.98
SHMT2-216ENST00000554975 TCF23Q7RTU1 214 aa8.93□□□□□ -0.98
SHMT2-216ENST00000554975 PDPNQ86YL7 162 aa8.93□□□□□ -0.98
SHMT2-216ENST00000554975 RPP25LQ8N5L8 163 aaKnown RBP8.93□□□□□ -0.98
SHMT2-216ENST00000554975 OR4F5Q8NH21 305 aa8.93□□□□□ -0.98
SHMT2-216ENST00000554975 TNFRSF14Q92956 283 aa8.93□□□□□ -0.98
SHMT2-216ENST00000554975 PCGF1Q9BSM1 259 aa8.93□□□□□ -0.98
SHMT2-216ENST00000554975 VSIRQ9H7M9 311 aa8.93□□□□□ -0.98
SHMT2-216ENST00000554975 NPVFQ9HCQ7 196 aa8.93□□□□□ -0.98
SHMT2-216ENST00000554975 METTL1Q9UBP6 276 aaKnown RBP8.93□□□□□ -0.98
SHMT2-216ENST00000554975 RFNGQ9Y644 331 aa8.93□□□□□ -0.98
SHMT2-216ENST00000554975 SLC31A2O15432 143 aa8.92□□□□□ -0.98
SHMT2-216ENST00000554975 PROP1O75360 226 aa8.92□□□□□ -0.98
SHMT2-216ENST00000554975 NDUFA7O95182 113 aa8.92□□□□□ -0.98
SHMT2-216ENST00000554975 S100A9P06702 114 aaKnown RBP8.92□□□□□ -0.98
SHMT2-216ENST00000554975 SMIM6P0DI80 62 aa8.92□□□□□ -0.98
SHMT2-216ENST00000554975 SELLP14151 372 aa8.92□□□□□ -0.98
SHMT2-216ENST00000554975 S100PP25815 95 aa8.92□□□□□ -0.98
SHMT2-216ENST00000554975 AKR1C3P42330 323 aa8.92□□□□□ -0.98
SHMT2-216ENST00000554975 GNG10P50151 68 aa8.92□□□□□ -0.98
SHMT2-216ENST00000554975 AKR1D1P51857 326 aa8.92□□□□□ -0.98
SHMT2-216ENST00000554975 ZNF137PP52743 207 aa8.92□□□□□ -0.98
SHMT2-216ENST00000554975 FGF8P55075 233 aaPredicted RBP8.92□□□□□ -0.98
SHMT2-216ENST00000554975 HABP2Q14520 560 aaPredicted RBP8.92□□□□□ -0.98
SHMT2-216ENST00000554975 DEFB112Q30KQ8 113 aa8.92□□□□□ -0.98
SHMT2-216ENST00000554975 KPRPQ5T749 579 aaPredicted RBP8.92□□□□□ -0.98
SHMT2-216ENST00000554975 C9orf139Q6ZV77 190 aa8.92□□□□□ -0.98
SHMT2-216ENST00000554975 FAM24BQ8N5W8 94 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms