RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 HSPB7Q9UBY9 170 aa8.15□□□□□ -1.1
SHMT2-215ENST00000554656 IGHV4OR15-8A0A075B7B6 117 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 A0A087WW49 117 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 A0A1W2PN81 502 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 H0YJW9 148 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 RRHO14718 337 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 SYNGR2O43760 224 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 SCAF4O95104 1147 aaKnown RBP8.14□□□□□ -1.11
SHMT2-215ENST00000554656 CRYZL1O95825 349 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 IL6RP08887 468 aaPredicted RBP8.14□□□□□ -1.11
SHMT2-215ENST00000554656 RPL12P30050 165 aaKnown RBP8.14□□□□□ -1.11
SHMT2-215ENST00000554656 G6PCP35575 357 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 CHRNA7P36544 502 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 INSL3P51460 131 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 VAMP2P63027 116 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 EIF5AP63241 154 aaKnown RBP8.14□□□□□ -1.11
SHMT2-215ENST00000554656 CX3CL1P78423 397 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 OR2B11Q5JQS5 317 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 Q6ZRM9 215 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 ZNF429Q86V71 674 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 VSTM2AQ8TAG5 236 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 RHOVQ96L33 236 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 CIB3Q96Q77 187 aaPredicted RBP8.14□□□□□ -1.11
SHMT2-215ENST00000554656 RNF5Q99942 180 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 ARPC5LQ9BPX5 153 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 SLC25A31Q9H0C2 315 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 BET1LQ9NYM9 111 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 FOXA2Q9Y261 457 aaPredicted RBP8.14□□□□□ -1.11
SHMT2-215ENST00000554656 WASHC3Q9Y3C0 194 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 SMAD5-AS1Q9Y6J3 95 aa8.14□□□□□ -1.11
SHMT2-215ENST00000554656 C3orf84H3BNL1 204 aa8.13□□□□□ -1.11
SHMT2-215ENST00000554656 TSC22D2O75157 780 aa8.13□□□□□ -1.11
SHMT2-215ENST00000554656 IFNA7P01567 189 aa8.13□□□□□ -1.11
SHMT2-215ENST00000554656 LGALS1P09382 135 aaKnown RBP8.13□□□□□ -1.11
SHMT2-215ENST00000554656 LGALS7P47929 136 aa8.13□□□□□ -1.11
SHMT2-215ENST00000554656 LINC00205P59089 165 aa8.13□□□□□ -1.11
SHMT2-215ENST00000554656 POLR2GP62487 172 aaKnown RBP eCLIP8.13□□□□□ -1.11
SHMT2-215ENST00000554656 TNFRSF9Q07011 255 aa8.13□□□□□ -1.11
SHMT2-215ENST00000554656 BAXQ07812 192 aa8.13□□□□□ -1.11
SHMT2-215ENST00000554656 OR2C3Q8N628 320 aa8.13□□□□□ -1.11
SHMT2-215ENST00000554656 OR4A5Q8NH83 315 aa8.13□□□□□ -1.11
SHMT2-215ENST00000554656 ARPC1AQ92747 370 aa8.13□□□□□ -1.11
SHMT2-215ENST00000554656 FLYWCH2Q96CP2 140 aaKnown RBP8.13□□□□□ -1.11
SHMT2-215ENST00000554656 SMIM8Q96KF7 97 aa8.13□□□□□ -1.11
SHMT2-215ENST00000554656 RCHY1Q96PM5 261 aa8.13□□□□□ -1.11
SHMT2-215ENST00000554656 FAM103A1Q9BTL3 118 aaKnown RBP8.13□□□□□ -1.11
SHMT2-215ENST00000554656 LYRM2Q9NU23 88 aaPredicted RBP8.13□□□□□ -1.11
SHMT2-215ENST00000554656 MSGN1A6NI15 193 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 C15orf61A6NNL5 157 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 LINC01619G3V211 115 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 SSSCA1O60232 199 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 SAP30O75446 220 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 IGHV3-11P01762 117 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 FRMD6-AS1P0C7T7 363 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 GP9P14770 177 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 AP2S1P53680 142 aaPredicted RBP8.12□□□□□ -1.11
SHMT2-215ENST00000554656 SPCS3P61009 180 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 UBE2KP61086 200 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 SSBP2P81877 361 aaPredicted RBP8.12□□□□□ -1.11
SHMT2-215ENST00000554656 CASC10Q5T4H9 136 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 ACSM6Q6P461 480 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 TEX261Q6UWH6 196 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 HAPLN4Q86UW8 402 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 PUSL1Q8N0Z8 303 aaKnown RBP8.12□□□□□ -1.11
SHMT2-215ENST00000554656 OR4A16Q8NH70 328 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 STOML3Q8TAV4 291 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 MUC7Q8TAX7 377 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 PHYHIPLQ96FC7 376 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 HARBI1Q96MB7 349 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 TMEM140Q9NV12 185 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 GAR1Q9NY12 217 aaKnown RBP8.12□□□□□ -1.11
SHMT2-215ENST00000554656 FKBP11Q9NYL4 201 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 KIAA1456Q9P272 454 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 PRNDQ9UKY0 176 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 PAIP2BQ9ULR5 123 aaKnown RBP8.12□□□□□ -1.11
SHMT2-215ENST00000554656 ZNF257Q9Y2Q1 563 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 U3KQ87 197 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 CSMD3Q7Z407 3707 aa8.12□□□□□ -1.11
SHMT2-215ENST00000554656 H7C2Y5 167 aa8.11□□□□□ -1.11
SHMT2-215ENST00000554656 UPK2O00526 184 aa8.11□□□□□ -1.11
SHMT2-215ENST00000554656 SHOXO15266 292 aa8.11□□□□□ -1.11
SHMT2-215ENST00000554656 SPDEFO95238 335 aa8.11□□□□□ -1.11
SHMT2-215ENST00000554656 OR9G9P0C7N8 305 aa8.11□□□□□ -1.11
SHMT2-215ENST00000554656 PAX9P55771 341 aa8.11□□□□□ -1.11
SHMT2-215ENST00000554656 HSPE1P61604 102 aaKnown RBP8.11□□□□□ -1.11
SHMT2-215ENST00000554656 VMA21Q3ZAQ7 101 aa8.11□□□□□ -1.11
SHMT2-215ENST00000554656 OR4A47Q6IF82 309 aa8.11□□□□□ -1.11
SHMT2-215ENST00000554656 PPP1R27Q86WC6 154 aa8.11□□□□□ -1.11
SHMT2-215ENST00000554656 TMEM252Q8N6L7 170 aa8.11□□□□□ -1.11
SHMT2-215ENST00000554656 ZNF680Q8NEM1 530 aa8.11□□□□□ -1.11
SHMT2-215ENST00000554656 CLCC1Q96S66 551 aa8.11□□□□□ -1.11
SHMT2-215ENST00000554656 RBKSQ9H477 322 aa8.11□□□□□ -1.11
SHMT2-215ENST00000554656 ZC4H2Q9NQZ6 224 aa8.11□□□□□ -1.11
SHMT2-215ENST00000554656 TMEM14BQ9NUH8 114 aa8.11□□□□□ -1.11
SHMT2-215ENST00000554656 RBMXL2O75526 392 aaKnown RBP8.1□□□□□ -1.11
SHMT2-215ENST00000554656 JTBO76095 146 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 KBTBD11O94819 623 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 IGKV1-16P04430 117 aa8.1□□□□□ -1.11
SHMT2-215ENST00000554656 TPT1P13693 172 aaKnown RBP8.1□□□□□ -1.11
SHMT2-215ENST00000554656 ATP5IP56385 69 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms