RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 OR13C8Q8NGS7 320 aa8.84□□□□□ -0.99
SRP54-203ENST00000553544 RNASE11Q8TAA1 199 aaKnown RBP8.84□□□□□ -0.99
SRP54-203ENST00000553544 S100ZQ8WXG8 99 aa8.84□□□□□ -0.99
SRP54-203ENST00000553544 LSM10Q969L4 123 aaKnown RBP8.84□□□□□ -0.99
SRP54-203ENST00000553544 OVOL2Q9BRP0 275 aa8.84□□□□□ -0.99
SRP54-203ENST00000553544 ZC4H2Q9NQZ6 224 aa8.84□□□□□ -0.99
SRP54-203ENST00000553544 PRNDQ9UKY0 176 aa8.84□□□□□ -0.99
SRP54-203ENST00000553544 KCNIP3Q9Y2W7 256 aa8.84□□□□□ -0.99
SRP54-203ENST00000553544 F11RQ9Y624 299 aaKnown RBP8.84□□□□□ -0.99
SRP54-203ENST00000553544 TEX13DA0A0J9YY54 714 aaPredicted RBP8.83□□□□□ -1
SRP54-203ENST00000553544 C3orf85A0A1B0GTC6 90 aa8.83□□□□□ -1
SRP54-203ENST00000553544 TMEM213A2RRL7 107 aa8.83□□□□□ -1
SRP54-203ENST00000553544 PI3P19957 117 aa8.83□□□□□ -1
SRP54-203ENST00000553544 SRPXP78539 464 aa8.83□□□□□ -1
SRP54-203ENST00000553544 DHODHQ02127 395 aa8.83□□□□□ -1
SRP54-203ENST00000553544 TRIM16LQ309B1 348 aa8.83□□□□□ -1
SRP54-203ENST00000553544 FAM106AQ4KMX7 169 aa8.83□□□□□ -1
SRP54-203ENST00000553544 SLC25A24Q6NUK1 477 aa8.83□□□□□ -1
SRP54-203ENST00000553544 SLC16A13Q7RTY0 426 aa8.83□□□□□ -1
SRP54-203ENST00000553544 FAM219AQ8IW50 185 aa8.83□□□□□ -1
SRP54-203ENST00000553544 OR51S1Q8NGJ8 323 aa8.83□□□□□ -1
SRP54-203ENST00000553544 OR4A16Q8NH70 328 aa8.83□□□□□ -1
SRP54-203ENST00000553544 MARCH1Q8TCQ1 289 aa8.83□□□□□ -1
SRP54-203ENST00000553544 DYNLRB2Q8TF09 96 aa8.83□□□□□ -1
SRP54-203ENST00000553544 TRIM63Q969Q1 353 aa8.83□□□□□ -1
SRP54-203ENST00000553544 MRGPRFQ96AM1 343 aa8.83□□□□□ -1
SRP54-203ENST00000553544 RRNAD1Q96FB5 475 aaKnown RBP8.83□□□□□ -1
SRP54-203ENST00000553544 TMEM56Q96MV1 263 aa8.83□□□□□ -1
SRP54-203ENST00000553544 ATP6V0BQ99437 205 aa8.83□□□□□ -1
SRP54-203ENST00000553544 SLC25A21Q9BQT8 299 aaPredicted RBP8.83□□□□□ -1
SRP54-203ENST00000553544 C7orf50Q9BRJ6 194 aaKnown RBP8.83□□□□□ -1
SRP54-203ENST00000553544 PDCD10Q9BUL8 212 aa8.83□□□□□ -1
SRP54-203ENST00000553544 WFDC10AQ9H1F0 79 aa8.83□□□□□ -1
SRP54-203ENST00000553544 TECRQ9NZ01 308 aaKnown RBP8.83□□□□□ -1
SRP54-203ENST00000553544 F8W735 103 aaPredicted RBP8.82□□□□□ -1
SRP54-203ENST00000553544 K7EIM0 57 aa8.82□□□□□ -1
SRP54-203ENST00000553544 P0C879 139 aa8.82□□□□□ -1
SRP54-203ENST00000553544 C8orf88P0DMB2 117 aa8.82□□□□□ -1
SRP54-203ENST00000553544 GPR183P32249 361 aa8.82□□□□□ -1
SRP54-203ENST00000553544 KLF9Q13886 244 aaPredicted RBP8.82□□□□□ -1
SRP54-203ENST00000553544 ZNF79Q15937 498 aa8.82□□□□□ -1
SRP54-203ENST00000553544 CNPY1Q3B7I2 92 aa8.82□□□□□ -1
SRP54-203ENST00000553544 UNQ9165/PRO28630Q6UXU0 137 aa8.82□□□□□ -1
SRP54-203ENST00000553544 OR1L6Q8NGR2 347 aa8.82□□□□□ -1
SRP54-203ENST00000553544 SCARB1Q8WTV0 552 aa8.82□□□□□ -1
SRP54-203ENST00000553544 GATAD1Q8WUU5 269 aa8.82□□□□□ -1
SRP54-203ENST00000553544 CACNG8Q8WXS5 425 aa8.82□□□□□ -1
SRP54-203ENST00000553544 TP53RKQ96S44 253 aa8.82□□□□□ -1
SRP54-203ENST00000553544 GGTLC1Q9BX51 225 aa8.82□□□□□ -1
SRP54-203ENST00000553544 HINT2Q9BX68 163 aa8.82□□□□□ -1
SRP54-203ENST00000553544 ZNF436Q9C0F3 470 aaPredicted RBP8.82□□□□□ -1
SRP54-203ENST00000553544 SRRQ9GZT4 340 aa8.82□□□□□ -1
SRP54-203ENST00000553544 NAA60Q9H7X0 242 aa8.82□□□□□ -1
SRP54-203ENST00000553544 RYR1P21817 5038 aa8.81□□□□□ -1
SRP54-203ENST00000553544 LOC102724200A0A096LPH7 203 aaPredicted RBP8.81□□□□□ -1
SRP54-203ENST00000553544 A0A0J9YWU9 116 aa8.81□□□□□ -1
SRP54-203ENST00000553544 ZNF320A2RRD8 509 aa8.81□□□□□ -1
SRP54-203ENST00000553544 TGOLN2O43493 480 aa8.81□□□□□ -1
SRP54-203ENST00000553544 IGKV1-5P01602 117 aa8.81□□□□□ -1
SRP54-203ENST00000553544 UCP1P25874 307 aa8.81□□□□□ -1
SRP54-203ENST00000553544 ELLP55199 621 aaPredicted RBP8.81□□□□□ -1
SRP54-203ENST00000553544 HSPE1P61604 102 aaKnown RBP8.81□□□□□ -1
SRP54-203ENST00000553544 TNFRSF9Q07011 255 aa8.81□□□□□ -1
SRP54-203ENST00000553544 RBMS2Q15434 407 aaKnown RBP8.81□□□□□ -1
SRP54-203ENST00000553544 LGALS9CQ6DKI2 356 aa8.81□□□□□ -1
SRP54-203ENST00000553544 FAAP20Q6NZ36 180 aa8.81□□□□□ -1
SRP54-203ENST00000553544 PLET1Q6UQ28 207 aa8.81□□□□□ -1
SRP54-203ENST00000553544 OR2C3Q8N628 320 aa8.81□□□□□ -1
SRP54-203ENST00000553544 UXS1Q8NBZ7 420 aa8.81□□□□□ -1
SRP54-203ENST00000553544 ZNF114Q8NC26 417 aa8.81□□□□□ -1
SRP54-203ENST00000553544 OR1P1Q8NH06 330 aa8.81□□□□□ -1
SRP54-203ENST00000553544 CCDC32Q9BV29 185 aa8.81□□□□□ -1
SRP54-203ENST00000553544 MLXQ9UH92 298 aa8.81□□□□□ -1
SRP54-203ENST00000553544 GPR132Q9UNW8 380 aa8.81□□□□□ -1
SRP54-203ENST00000553544 DEDDO75618 318 aa8.8□□□□□ -1
SRP54-203ENST00000553544 PRCDQ00LT1 54 aa8.8□□□□□ -1
SRP54-203ENST00000553544 TM4SF20Q53R12 229 aa8.8□□□□□ -1
SRP54-203ENST00000553544 DMRTA1Q5VZB9 504 aa8.8□□□□□ -1
SRP54-203ENST00000553544 SPSB3Q6PJ21 355 aa8.8□□□□□ -1
SRP54-203ENST00000553544 WFDC3Q8IUB2 231 aa8.8□□□□□ -1
SRP54-203ENST00000553544 TMEM61Q8N0U2 210 aa8.8□□□□□ -1
SRP54-203ENST00000553544 RBPMSQ93062 196 aaKnown RBP8.8□□□□□ -1
SRP54-203ENST00000553544 IL22RA2Q969J5 263 aa8.8□□□□□ -1
SRP54-203ENST00000553544 MARC2Q969Z3 335 aa8.8□□□□□ -1
SRP54-203ENST00000553544 WDR89Q96FK6 387 aaPredicted RBP8.8□□□□□ -1
SRP54-203ENST00000553544 GALNT14Q96FL9 552 aa8.8□□□□□ -1
SRP54-203ENST00000553544 BSCL2Q96G97 398 aaPredicted RBP8.8□□□□□ -1
SRP54-203ENST00000553544 ZNF414Q96IQ9 312 aa8.8□□□□□ -1
SRP54-203ENST00000553544 TMEM222Q9H0R3 208 aa8.8□□□□□ -1
SRP54-203ENST00000553544 C5orf66Q9H5L9 145 aa8.8□□□□□ -1
SRP54-203ENST00000553544 C21orf62Q9NYP8 219 aa8.8□□□□□ -1
SRP54-203ENST00000553544 PTTG2Q9NZH5 202 aa8.8□□□□□ -1
SRP54-203ENST00000553544 MRPL27Q9P0M9 148 aaKnown RBP8.8□□□□□ -1
SRP54-203ENST00000553544 IGHV3-21A0A0B4J1V1 117 aa8.79□□□□□ -1
SRP54-203ENST00000553544 A0A0B4J293 547 aa8.79□□□□□ -1
SRP54-203ENST00000553544 IGHV3-35A0A0C4DH35 117 aa8.79□□□□□ -1
SRP54-203ENST00000553544 OR2T8A6NH00 312 aa8.79□□□□□ -1
SRP54-203ENST00000553544 CRYM-AS1A6NIL9 109 aa8.79□□□□□ -1
SRP54-203ENST00000553544 INS-IGF2F8WCM5 200 aa8.79□□□□□ -1
SRP54-203ENST00000553544 I3L2K1 104 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms