RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 MC5RP33032 325 aa10.51□□□□□ -0.73
SHMT2-205ENST00000553474 UQCRFS1P47985 274 aa10.51□□□□□ -0.73
SHMT2-205ENST00000553474 CD69Q07108 199 aa10.51□□□□□ -0.73
SHMT2-205ENST00000553474 HLA-DRB5Q30154 266 aa10.51□□□□□ -0.73
SHMT2-205ENST00000553474 TMEM200BQ69YZ2 307 aa10.51□□□□□ -0.73
SHMT2-205ENST00000553474 C16orf54Q6UWD8 224 aa10.51□□□□□ -0.73
SHMT2-205ENST00000553474 NECAP1Q8NC96 275 aa10.51□□□□□ -0.73
SHMT2-205ENST00000553474 OR10D4PQ8NGN7 298 aa10.51□□□□□ -0.73
SHMT2-205ENST00000553474 TNFRSF14Q92956 283 aa10.51□□□□□ -0.73
SHMT2-205ENST00000553474 PFDN5Q99471 154 aa10.51□□□□□ -0.73
SHMT2-205ENST00000553474 HINT2Q9BX68 163 aa10.51□□□□□ -0.73
SHMT2-205ENST00000553474 TECRQ9NZ01 308 aaKnown RBP10.51□□□□□ -0.73
SHMT2-205ENST00000553474 TNCP24821 2201 aa10.51□□□□□ -0.73
SHMT2-205ENST00000553474 PCNX1Q96RV3 2341 aa10.51□□□□□ -0.73
SHMT2-205ENST00000553474 POLEQ07864 2286 aa10.5□□□□□ -0.73
SHMT2-205ENST00000553474 RNASE2P10153 161 aaKnown RBP10.5□□□□□ -0.73
SHMT2-205ENST00000553474 HIST1H1BP16401 226 aaKnown RBP10.5□□□□□ -0.73
SHMT2-205ENST00000553474 SUB1P53999 127 aaKnown RBP eCLIP10.5□□□□□ -0.733e-7■■■□□ 14.9
SHMT2-205ENST00000553474 CASP6P55212 293 aa10.5□□□□□ -0.73
SHMT2-205ENST00000553474 FAM78BQ5VT40 261 aa10.5□□□□□ -0.73
SHMT2-205ENST00000553474 MRPL41Q8IXM3 137 aaKnown RBP10.5□□□□□ -0.73
SHMT2-205ENST00000553474 OR1P1Q8NH06 330 aa10.5□□□□□ -0.73
SHMT2-205ENST00000553474 NABP2Q9BQ15 211 aa10.5□□□□□ -0.73
SHMT2-205ENST00000553474 MRPL20Q9BYC9 149 aaKnown RBP10.5□□□□□ -0.73
SHMT2-205ENST00000553474 TRBV23-1A0A0A0MS06 115 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 DVL1O14640 695 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 OR5G3P0C626 314 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 GNLYP22749 145 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 IL3RAP26951 378 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 GAMTQ14353 236 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 C4orf17Q53FE4 359 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 OR10X1Q8NGY0 326 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 OR9G1Q8NH87 305 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 RND1Q92730 232 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 PACRGQ96M98 296 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-205ENST00000553474 HIST1H2BLQ99880 126 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 ELOVL1Q9BW60 279 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 WASHC3Q9Y3C0 194 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 HIVEP3Q5T1R4 2406 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 SCO2A0A1W2PP80 73 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 GATCO43716 136 aaKnown RBP10.49□□□□□ -0.73
SHMT2-205ENST00000553474 FABP4P15090 132 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 LGALS7P47929 136 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 RPL19P84098 196 aaKnown RBP10.49□□□□□ -0.73
SHMT2-205ENST00000553474 TEX38Q6PEX7 206 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 OR4P4Q8NGL7 312 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 OR5R1Q8NH85 324 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 ST6GALNAC6Q969X2 333 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 VKORC1Q9BQB6 163 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 DERL1Q9BUN8 251 aa10.49□□□□□ -0.73
SHMT2-205ENST00000553474 YTHDF2Q9Y5A9 579 aaKnown RBP10.49□□□□□ -0.73
SHMT2-205ENST00000553474 TRBV20OR9-2A0A075B6H5 130 aa10.48□□□□□ -0.73
SHMT2-205ENST00000553474 A0A1W2PRE2 83 aa10.48□□□□□ -0.73
SHMT2-205ENST00000553474 LINC00587B1AMM8 73 aa10.48□□□□□ -0.73
SHMT2-205ENST00000553474 B9A039 149 aa10.48□□□□□ -0.73
SHMT2-205ENST00000553474 APOBEC3AP31941 199 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-205ENST00000553474 GFI1BQ5VTD9 330 aa10.48□□□□□ -0.73
SHMT2-205ENST00000553474 OR10G8Q8NGN5 311 aa10.48□□□□□ -0.73
SHMT2-205ENST00000553474 CCL17Q92583 94 aa10.48□□□□□ -0.73
SHMT2-205ENST00000553474 DYNLRB1Q9NP97 96 aa10.48□□□□□ -0.73
SHMT2-205ENST00000553474 XKRY2A2RUG3 117 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 SHISA9B4DS77 424 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 CCL3L1P16619 93 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 SELENOTP62341 195 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 TMEM95Q3KNT9 176 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 VMA21Q3ZAQ7 101 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 TMEM155Q4W5P6 130 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 SGMS2Q8NHU3 365 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 OCC1Q8TAD7 63 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 H1FXQ92522 213 aaKnown RBP10.47□□□□□ -0.73
SHMT2-205ENST00000553474 IGKV1OR2-108A0A075B7D4 117 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 CCL21O00585 134 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 OR10J4P0C629 311 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 C8orf88P0DMB2 117 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 LOXP28300 417 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-205ENST00000553474 OR10J1P30954 320 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 CA7P43166 264 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 CNN1P51911 297 aaKnown RBP10.47□□□□□ -0.73
SHMT2-205ENST00000553474 DLX6P56179 175 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 YPEL3P61236 119 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-205ENST00000553474 RPL15P61313 204 aaKnown RBP10.47□□□□□ -0.73
SHMT2-205ENST00000553474 PSG5Q15238 335 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 MIR17HGQ75NE6 70 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 TGIF2LXQ8IUE1 241 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 WFIKKN1Q96NZ8 548 aa10.47□□□□□ -0.73
SHMT2-205ENST00000553474 A0A0U1RQK1 487 aa10.46□□□□□ -0.74
SHMT2-205ENST00000553474 ZNF320A2RRD8 509 aa10.46□□□□□ -0.74
SHMT2-205ENST00000553474 RBP4P02753 201 aa10.46□□□□□ -0.74
SHMT2-205ENST00000553474 MYOD1P15172 320 aa10.46□□□□□ -0.74
SHMT2-205ENST00000553474 JOSD1Q15040 202 aaPredicted RBP10.46□□□□□ -0.74
SHMT2-205ENST00000553474 PDZD11Q5EBL8 140 aa10.46□□□□□ -0.74
SHMT2-205ENST00000553474 SPATA31B1PQ5VZV4 182 aa10.46□□□□□ -0.74
SHMT2-205ENST00000553474 ETFRF1Q6IPR1 90 aa10.46□□□□□ -0.74
SHMT2-205ENST00000553474 OR5T1Q8NG75 326 aa10.46□□□□□ -0.74
SHMT2-205ENST00000553474 OR1L4Q8NGR5 311 aa10.46□□□□□ -0.74
SHMT2-205ENST00000553474 TMEM18Q96B42 140 aa10.46□□□□□ -0.74
SHMT2-205ENST00000553474 SLC25A33Q9BSK2 321 aa10.46□□□□□ -0.74
SHMT2-205ENST00000553474 IL36BQ9NZH7 164 aa10.46□□□□□ -0.74
SHMT2-205ENST00000553474 MYO18BQ8IUG5 2567 aa10.45□□□□□ -0.74
SHMT2-205ENST00000553474 TRBV9A0A0B4J1U6 114 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms