RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 LIMS3P0CW19 117 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 LIMS4P0CW20 117 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 NQO1P15559 274 aaKnown RBP2.52□□□□□ -2.01
LIMA1-208ENST00000551691 AKR1C4P17516 323 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 MAGEA2P43356 314 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 CBX5P45973 191 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 RPS10P46783 165 aaKnown RBP2.52□□□□□ -2.01
LIMA1-208ENST00000551691 CDC34P49427 236 aaPredicted RBP2.52□□□□□ -2.01
LIMA1-208ENST00000551691 GRB2P62993 217 aaKnown RBP2.52□□□□□ -2.01
LIMA1-208ENST00000551691 YIF1BQ5BJH7 314 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 MRPL2Q5T653 305 aaKnown RBP2.52□□□□□ -2.01
LIMA1-208ENST00000551691 TNFAIP8L2Q6P589 184 aaPredicted RBP2.52□□□□□ -2.01
LIMA1-208ENST00000551691 LINC00322Q6ZN03 302 aaPredicted RBP2.52□□□□□ -2.01
LIMA1-208ENST00000551691 SGPP2Q8IWX5 399 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 PGAM4Q8N0Y7 254 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 OR11L1Q8NGX0 322 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 OR52P1PQ8NH57 321 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 OR2AE1Q8NHA4 323 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 DYNC2LI1Q8TCX1 351 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 C15orf40Q8WUR7 153 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 OR5P2Q8WZ92 322 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 ROPN1LQ96C74 230 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 KCNS1Q96KK3 526 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 FAM19A4Q96LR4 140 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 ZNF488Q96MN9 340 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 NDFIP1Q9BT67 221 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 CHAC1Q9BUX1 264 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 OR2H1Q9GZK4 316 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 SLC25A31Q9H0C2 315 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 OR51I1Q9H343 314 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 ZNF222Q9UK12 451 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 LRRC42Q9Y546 428 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 TMEM14AQ9Y6G1 99 aa2.52□□□□□ -2.01
LIMA1-208ENST00000551691 A0A1B0GX12 115 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 RBFOX3A6NFN3 312 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 EFCAB9A8MZ26 197 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 M0R1W7 72 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 NDUFA2O43678 99 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 MPZL2O60487 215 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 IGHV3-11P01762 117 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 APCSP02743 223 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 RPS17P08708 135 aaKnown RBP2.51□□□□□ -2.01
LIMA1-208ENST00000551691 CCL3L1P16619 93 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 TAC1P20366 129 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 CRABP2P29373 138 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 TGM4P49221 684 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 CRISP3P54108 245 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 HBG1P69891 147 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 HBG2P69892 147 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 HBA1P69905 142 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 FMODQ06828 376 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 PRSS8Q16651 343 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 UBE2NLQ5JXB2 153 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 LINC01551Q86U37 167 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 NAA40Q86UY6 237 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 CTAGE3PQ8IX95 158 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 RIMKLAQ8IXN7 391 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 C11orf53Q8IXP5 236 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 CLECL1Q8IZS7 167 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 GAPTQ8N292 157 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 DRAM1Q8N682 238 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 KRTCAP2Q8N6L1 136 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 CLDN22Q8N7P3 220 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 Q8N976 141 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 OR9Q1Q8NGQ5 310 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 OR10C1Q96KK4 312 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 PGLYRP3Q96LB9 341 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 ANAPC13Q9BS18 74 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 FAAP24Q9BTP7 215 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 ZNF426Q9BUY5 554 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 SLC25A39Q9BZJ4 359 aaPredicted RBP2.51□□□□□ -2.01
LIMA1-208ENST00000551691 DPY30Q9C005 99 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 FGF23Q9GZV9 251 aaPredicted RBP2.51□□□□□ -2.01
LIMA1-208ENST00000551691 ALX4Q9H161 411 aaPredicted RBP2.51□□□□□ -2.01
LIMA1-208ENST00000551691 C19orf12Q9NSK7 152 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 TAS2R5Q9NYW4 299 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 KAAG1Q9UBP8 84 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 ZNF391Q9UJN7 358 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 PSG11Q9UQ72 335 aa2.51□□□□□ -2.01
LIMA1-208ENST00000551691 TMEM223A0PJW6 202 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 DAPL1A0PJW8 107 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 A8MT66 165 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 H3BSA7 217 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 FAAHO00519 579 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 OVOL1O14753 267 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 SSNA1O43805 119 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 PLIN3O60664 434 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 CCDC22O60826 627 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 ADAP1O75689 374 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 OR2A4O95047 310 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 ORM1P02763 201 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 SMR3BP02814 79 aaPredicted RBP2.5□□□□□ -2.01
LIMA1-208ENST00000551691 INSL3P51460 131 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 DLX6P56179 175 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 MED21Q13503 144 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 KCNJ8Q15842 424 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 HIST3H3Q16695 136 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 IMPG1Q17R60 797 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 PDZD11Q5EBL8 140 aa2.5□□□□□ -2.01
LIMA1-208ENST00000551691 TEX36Q5VZQ5 186 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms