RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 TMPRSS5Q9H3S3 457 aa15.67■□□□□ 0.1
SSH1-209ENST00000551165 DMRT1Q9Y5R6 373 aa15.67■□□□□ 0.1
SSH1-209ENST00000551165 TRAV1-1A0A0B4J248 108 aa15.67■□□□□ 0.1
SSH1-209ENST00000551165 MAP1LC3B2A6NCE7 125 aa15.67■□□□□ 0.1
SSH1-209ENST00000551165 RBFOX3A6NFN3 312 aa15.67■□□□□ 0.1
SSH1-209ENST00000551165 NCBP2LA6PVI3 153 aaKnown RBP15.67■□□□□ 0.1
SSH1-209ENST00000551165 MPDU1O75352 247 aa15.67■□□□□ 0.1
SSH1-209ENST00000551165 FBP1P09467 338 aa15.67■□□□□ 0.1
SSH1-209ENST00000551165 GATA2P23769 480 aaPredicted RBP15.67■□□□□ 0.1
SSH1-209ENST00000551165 MAS1LP35410 378 aa15.67■□□□□ 0.1
SSH1-209ENST00000551165 OPRK1P41145 380 aa15.67■□□□□ 0.1
SSH1-209ENST00000551165 MAP1LC3BQ9GZQ8 125 aa15.67■□□□□ 0.1
SSH1-209ENST00000551165 SLC39A9Q9NUM3 307 aa15.67■□□□□ 0.1
SSH1-209ENST00000551165 CNIH1O95406 144 aa15.66■□□□□ 0.1
SSH1-209ENST00000551165 MSMBP08118 114 aa15.66■□□□□ 0.1
SSH1-209ENST00000551165 M6PRP20645 277 aa15.66■□□□□ 0.1
SSH1-209ENST00000551165 ATP5IP56385 69 aaPredicted RBP15.66■□□□□ 0.1
SSH1-209ENST00000551165 C5orf64Q2M2E5 130 aa15.66■□□□□ 0.1
SSH1-209ENST00000551165 SLC16A13Q7RTY0 426 aa15.66■□□□□ 0.1
SSH1-209ENST00000551165 LFNGQ8NES3 379 aa15.66■□□□□ 0.1
SSH1-209ENST00000551165 ACY3Q96HD9 319 aa15.66■□□□□ 0.1
SSH1-209ENST00000551165 KIAA1456Q9P272 454 aa15.66■□□□□ 0.1
SSH1-209ENST00000551165 GNG13Q9P2W3 67 aa15.66■□□□□ 0.1
SSH1-209ENST00000551165 NAV2Q8IVL1 2488 aa15.66■□□□□ 0.1
SSH1-209ENST00000551165 A0A096LNT2 108 aa15.65■□□□□ 0.1
SSH1-209ENST00000551165 IGHV3-21A0A0B4J1V1 117 aa15.65■□□□□ 0.1
SSH1-209ENST00000551165 TRAV40A0A0B4J280 105 aa15.65■□□□□ 0.1
SSH1-209ENST00000551165 IGHV4-38-2P0DP08 117 aa15.65■□□□□ 0.1
SSH1-209ENST00000551165 C10orf91Q5T1B1 145 aa15.65■□□□□ 0.1
SSH1-209ENST00000551165 RAB24Q969Q5 203 aa15.65■□□□□ 0.1
SSH1-209ENST00000551165 TMEM11P17152 192 aa15.65■□□□□ 0.1
SSH1-209ENST00000551165 EBI3Q14213 229 aa15.65■□□□□ 0.1
SSH1-209ENST00000551165 TMEM144Q7Z5S9 345 aa15.65■□□□□ 0.1
SSH1-209ENST00000551165 J3QKU1 62 aa15.64■□□□□ 0.09
SSH1-209ENST00000551165 AVPP01185 164 aa15.64■□□□□ 0.09
SSH1-209ENST00000551165 PEA15Q15121 130 aa15.64■□□□□ 0.09
SSH1-209ENST00000551165 STPG3Q8N7X2 389 aa15.64■□□□□ 0.09
SSH1-209ENST00000551165 MISP3Q96FF7 219 aa15.64■□□□□ 0.09
SSH1-209ENST00000551165 BTBD17A6NE02 478 aa15.64■□□□□ 0.09
SSH1-209ENST00000551165 ZFP92A6NM28 416 aa15.64■□□□□ 0.09
SSH1-209ENST00000551165 HBE1P02100 147 aa15.64■□□□□ 0.09
SSH1-209ENST00000551165 MBP02144 154 aa15.64■□□□□ 0.09
SSH1-209ENST00000551165 LINC00869P0C866 280 aa15.64■□□□□ 0.09
SSH1-209ENST00000551165 DSCR9P59020 149 aa15.64■□□□□ 0.09
SSH1-209ENST00000551165 B2MP61769 119 aa15.64■□□□□ 0.09
SSH1-209ENST00000551165 NDPQ00604 133 aa15.64■□□□□ 0.09
SSH1-209ENST00000551165 ICAM4Q14773 271 aa15.64■□□□□ 0.09
SSH1-209ENST00000551165 FXYD3Q14802 87 aa15.64■□□□□ 0.09
SSH1-209ENST00000551165 HIF1ANQ9NWT6 349 aa15.64■□□□□ 0.09
SSH1-209ENST00000551165 FNDC10F2Z333 226 aa15.63■□□□□ 0.09
SSH1-209ENST00000551165 OR10J1P30954 320 aa15.63■□□□□ 0.09
SSH1-209ENST00000551165 SUB1P53999 127 aaKnown RBP eCLIP15.63■□□□□ 0.09
SSH1-209ENST00000551165 ACOT6Q3I5F7 207 aaPredicted RBP15.63■□□□□ 0.09
SSH1-209ENST00000551165 RXFP4Q8TDU9 374 aa15.63■□□□□ 0.09
SSH1-209ENST00000551165 PBDC1Q9BVG4 233 aa15.63■□□□□ 0.09
SSH1-209ENST00000551165 C7orf69Q9H7B7 122 aa15.63■□□□□ 0.09
SSH1-209ENST00000551165 SLC45A2Q9UMX9 530 aa15.63■□□□□ 0.09
SSH1-209ENST00000551165 IGHV1-69DA0A0B4J2H0 117 aa15.63■□□□□ 0.09
SSH1-209ENST00000551165 CTXND1A0A1B0GTU2 59 aa15.63■□□□□ 0.09
SSH1-209ENST00000551165 IGHV1-69P01742 117 aa15.63■□□□□ 0.09
SSH1-209ENST00000551165 PRR20EP86478 221 aa15.63■□□□□ 0.09
SSH1-209ENST00000551165 PRR20CP86479 221 aa15.63■□□□□ 0.09
SSH1-209ENST00000551165 PRR20DP86480 221 aa15.63■□□□□ 0.09
SSH1-209ENST00000551165 PRR20BP86481 221 aa15.63■□□□□ 0.09
SSH1-209ENST00000551165 PRR20AP86496 221 aa15.63■□□□□ 0.09
SSH1-209ENST00000551165 RNASEH2CQ8TDP1 164 aaKnown RBP15.63■□□□□ 0.09
SSH1-209ENST00000551165 GATAD1Q8WUU5 269 aa15.63■□□□□ 0.09
SSH1-209ENST00000551165 NPIPB3Q92617 1050 aa15.63■□□□□ 0.09
SSH1-209ENST00000551165 SEC11CQ9BY50 192 aa15.63■□□□□ 0.09
SSH1-209ENST00000551165 ACTR3CQ9C0K3 210 aaPredicted RBP15.63■□□□□ 0.09
SSH1-209ENST00000551165 GPX4P36969 197 aaPredicted RBP15.62■□□□□ 0.09
SSH1-209ENST00000551165 CX3CL1P78423 397 aa15.62■□□□□ 0.09
SSH1-209ENST00000551165 PVRIGQ6DKI7 326 aa15.62■□□□□ 0.09
SSH1-209ENST00000551165 ABHD5Q8WTS1 349 aa15.62■□□□□ 0.09
SSH1-209ENST00000551165 SLC25A33Q9BSK2 321 aa15.62■□□□□ 0.09
SSH1-209ENST00000551165 CARHSP1Q9Y2V2 147 aaKnown RBP15.62■□□□□ 0.09
SSH1-209ENST00000551165 CDC34P49427 236 aaPredicted RBP15.62■□□□□ 0.09
SSH1-209ENST00000551165 SPATA31B1PQ5VZV4 182 aa15.62■□□□□ 0.09
SSH1-209ENST00000551165 ZNF114Q8NC26 417 aa15.62■□□□□ 0.09
SSH1-209ENST00000551165 CACNG8Q8WXS5 425 aa15.62■□□□□ 0.09
SSH1-209ENST00000551165 F11RQ9Y624 299 aaKnown RBP15.62■□□□□ 0.09
SSH1-209ENST00000551165 FAM106CPP0CH98 169 aa15.61■□□□□ 0.09
SSH1-209ENST00000551165 SLC25A16P16260 332 aa15.61■□□□□ 0.09
SSH1-209ENST00000551165 RPL29P47914 159 aaKnown RBP15.61■□□□□ 0.09
SSH1-209ENST00000551165 Q8N9W7 124 aa15.61■□□□□ 0.09
SSH1-209ENST00000551165 SEPSECSQ9HD40 501 aaKnown RBP15.61■□□□□ 0.09
SSH1-209ENST00000551165 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.61■□□□□ 0.093e-6■■■■■ 29.9
SSH1-209ENST00000551165 A0A0U1RQK1 487 aa15.61■□□□□ 0.09
SSH1-209ENST00000551165 B4DSR2 109 aa15.61■□□□□ 0.09
SSH1-209ENST00000551165 CYB5BO43169 146 aa15.61■□□□□ 0.09
SSH1-209ENST00000551165 DEFB113Q30KQ7 82 aa15.61■□□□□ 0.09
SSH1-209ENST00000551165 KLF17Q5JT82 389 aaPredicted RBP15.61■□□□□ 0.09
SSH1-209ENST00000551165 ZNF506Q5JVG8 444 aa15.61■□□□□ 0.09
SSH1-209ENST00000551165 OR1P1Q8NH06 330 aa15.61■□□□□ 0.09
SSH1-209ENST00000551165 SLC35E1Q96K37 410 aa15.61■□□□□ 0.09
SSH1-209ENST00000551165 IGKV1D-37A0A075B6S9 117 aa15.6■□□□□ 0.09
SSH1-209ENST00000551165 LOC102723971A0A1B0GUV8 181 aa15.6■□□□□ 0.09
SSH1-209ENST00000551165 SH2D7A6NKC9 451 aaPredicted RBP15.6■□□□□ 0.09
SSH1-209ENST00000551165 SEC14L6B5MCN3 397 aa15.6■□□□□ 0.09
SSH1-209ENST00000551165 RNF223E7ERA6 249 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms