RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 A0A0B4J293 547 aa13.94□□□□□ -0.18
CHMP1A-207ENST00000549328 IZUMO4Q1ZYL8 232 aa13.94□□□□□ -0.18
CHMP1A-207ENST00000549328 MARCH1Q8TCQ1 289 aa13.94□□□□□ -0.18
CHMP1A-207ENST00000549328 DIRAS2Q96HU8 199 aa13.94□□□□□ -0.18
CHMP1A-207ENST00000549328 C20orf24Q9BUV8 137 aa13.94□□□□□ -0.18
CHMP1A-207ENST00000549328 MT-CO2P00403 227 aa13.93□□□□□ -0.18
CHMP1A-207ENST00000549328 SNCAP37840 140 aa13.93□□□□□ -0.18
CHMP1A-207ENST00000549328 SURF2Q15527 256 aaPredicted RBP13.93□□□□□ -0.18
CHMP1A-207ENST00000549328 TRIM16LQ309B1 348 aa13.93□□□□□ -0.18
CHMP1A-207ENST00000549328 SP6Q3SY56 376 aa13.93□□□□□ -0.18
CHMP1A-207ENST00000549328 RRNAD1Q96FB5 475 aaKnown RBP13.93□□□□□ -0.18
CHMP1A-207ENST00000549328 DISC1C4P0D8 188 aa13.92□□□□□ -0.18
CHMP1A-207ENST00000549328 ST8SIA3O43173 380 aa13.92□□□□□ -0.18
CHMP1A-207ENST00000549328 CDS2O95674 445 aa13.92□□□□□ -0.18
CHMP1A-207ENST00000549328 IFNA17P01571 189 aa13.92□□□□□ -0.18
CHMP1A-207ENST00000549328 RPL5P46777 297 aaKnown RBP13.92□□□□□ -0.18
CHMP1A-207ENST00000549328 IL18Q14116 193 aa13.92□□□□□ -0.18
CHMP1A-207ENST00000549328 PVRIGQ6DKI7 326 aa13.92□□□□□ -0.18
CHMP1A-207ENST00000549328 SLC35G3Q8N808 338 aa13.92□□□□□ -0.18
CHMP1A-207ENST00000549328 OR10C1Q96KK4 312 aa13.92□□□□□ -0.18
CHMP1A-207ENST00000549328 PDCD10Q9BUL8 212 aa13.92□□□□□ -0.18
CHMP1A-207ENST00000549328 NXF2Q9GZY0 626 aaKnown RBP13.92□□□□□ -0.18
CHMP1A-207ENST00000549328 TMEM222Q9H0R3 208 aa13.92□□□□□ -0.18
CHMP1A-207ENST00000549328 RETNQ9HD89 108 aa13.92□□□□□ -0.18
CHMP1A-207ENST00000549328 SMPXQ9UHP9 88 aa13.92□□□□□ -0.18
CHMP1A-207ENST00000549328 C14orf166Q9Y224 244 aaKnown RBP13.92□□□□□ -0.18
CHMP1A-207ENST00000549328 LOC102724200A0A096LPH7 203 aaPredicted RBP13.91□□□□□ -0.18
CHMP1A-207ENST00000549328 GNG7O60262 68 aa13.91□□□□□ -0.18
CHMP1A-207ENST00000549328 AKAIN1P0CW23 69 aa13.91□□□□□ -0.18
CHMP1A-207ENST00000549328 SUB1P53999 127 aaKnown RBP eCLIP13.91□□□□□ -0.183e-8■■□□□ 12.4
CHMP1A-207ENST00000549328 FAM219AQ8IW50 185 aa13.91□□□□□ -0.18
CHMP1A-207ENST00000549328 GLYATL2Q8WU03 294 aa13.91□□□□□ -0.18
CHMP1A-207ENST00000549328 PINX1Q96BK5 328 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-207ENST00000549328 ZNF414Q96IQ9 312 aa13.91□□□□□ -0.18
CHMP1A-207ENST00000549328 RTBDNQ9BSG5 229 aaPredicted RBP13.91□□□□□ -0.18
CHMP1A-207ENST00000549328 GGTLC1Q9BX51 225 aa13.91□□□□□ -0.18
CHMP1A-207ENST00000549328 IGHV3OR16-8A0A075B7F1 116 aa13.9□□□□□ -0.18
CHMP1A-207ENST00000549328 CORTO00230 105 aa13.9□□□□□ -0.18
CHMP1A-207ENST00000549328 NPBWR1P48145 328 aa13.9□□□□□ -0.18
CHMP1A-207ENST00000549328 AARDQ4LEZ3 155 aa13.9□□□□□ -0.18
CHMP1A-207ENST00000549328 SPINK9Q5DT21 86 aa13.9□□□□□ -0.18
CHMP1A-207ENST00000549328 FAAP20Q6NZ36 180 aa13.9□□□□□ -0.18
CHMP1A-207ENST00000549328 OR4C16Q8NGL9 310 aa13.9□□□□□ -0.18
CHMP1A-207ENST00000549328 IL17DQ8TAD2 202 aa13.9□□□□□ -0.18
CHMP1A-207ENST00000549328 PRRT1Q99946 306 aa13.9□□□□□ -0.18
CHMP1A-207ENST00000549328 FAM110AQ9BQ89 295 aa13.9□□□□□ -0.18
CHMP1A-207ENST00000549328 GPR132Q9UNW8 380 aa13.9□□□□□ -0.18
CHMP1A-207ENST00000549328 DNAH7Q8WXX0 4024 aa13.9□□□□□ -0.18
CHMP1A-207ENST00000549328 IGHV7-4-1A0A0J9YVY3 117 aa13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 TEX13DA0A0J9YY54 714 aaPredicted RBP13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 OR4C46A6NHA9 309 aa13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 ZNF207O43670 478 aaKnown RBP13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 GSTZ1O43708 216 aaPredicted RBP13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 NOL3O60936 208 aaKnown RBP13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 YIF1AO95070 293 aa13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 IGHV3-48P01763 117 aa13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 OR5AC1P0C628 307 aa13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 ETV6P41212 452 aa13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 DHODHQ02127 395 aa13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 ZFAND6Q6FIF0 208 aa13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 DUSP18Q8NEJ0 188 aa13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 RNASE11Q8TAA1 199 aaKnown RBP13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 RHPN1-AS1Q9BWJ2 59 aa13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 SLIRPQ9GZT3 109 aaKnown RBP13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 C6orf62Q9GZU0 229 aaPredicted RBP13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 NAA60Q9H7X0 242 aa13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 RSL24D1Q9UHA3 163 aaKnown RBP13.89□□□□□ -0.19
CHMP1A-207ENST00000549328 TRAV14DV4A0A0A6YYC5 116 aa13.88□□□□□ -0.19
CHMP1A-207ENST00000549328 A0A0G2JRQ6 117 aa13.88□□□□□ -0.19
CHMP1A-207ENST00000549328 ANKRD20A5PA0PJZ0 165 aa13.88□□□□□ -0.19
CHMP1A-207ENST00000549328 H3BMQ9 156 aa13.88□□□□□ -0.19
CHMP1A-207ENST00000549328 CHEK1O14757 476 aa13.88□□□□□ -0.19
CHMP1A-207ENST00000549328 RNASE2P10153 161 aaKnown RBP13.88□□□□□ -0.19
CHMP1A-207ENST00000549328 Q6ZRM9 215 aa13.88□□□□□ -0.19
CHMP1A-207ENST00000549328 TMEM116Q8NCL8 245 aa13.88□□□□□ -0.19
CHMP1A-207ENST00000549328 OR52E5Q8NH55 327 aa13.88□□□□□ -0.19
CHMP1A-207ENST00000549328 RBPMSQ93062 196 aaKnown RBP13.88□□□□□ -0.19
CHMP1A-207ENST00000549328 SOSTQ9BQB4 213 aa13.88□□□□□ -0.19
CHMP1A-207ENST00000549328 ENY2Q9NPA8 101 aa13.88□□□□□ -0.19
CHMP1A-207ENST00000549328 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.88□□□□□ -0.19
CHMP1A-207ENST00000549328 RYR3Q15413 4870 aa13.87□□□□□ -0.19
CHMP1A-207ENST00000549328 TENM2Q9NT68 2774 aa13.87□□□□□ -0.19
CHMP1A-207ENST00000549328 HOXA1P49639 335 aaPredicted RBP13.87□□□□□ -0.19
CHMP1A-207ENST00000549328 SPCS3P61009 180 aa13.87□□□□□ -0.19
CHMP1A-207ENST00000549328 OR51S1Q8NGJ8 323 aa13.87□□□□□ -0.19
CHMP1A-207ENST00000549328 RNF2Q99496 336 aa13.87□□□□□ -0.19
CHMP1A-207ENST00000549328 GINS3Q9BRX5 216 aa13.87□□□□□ -0.19
CHMP1A-207ENST00000549328 CRYM-AS1A6NIL9 109 aa13.86□□□□□ -0.19
CHMP1A-207ENST00000549328 TMEM50AO95807 157 aa13.86□□□□□ -0.19
CHMP1A-207ENST00000549328 CD5P06127 495 aa13.86□□□□□ -0.19
CHMP1A-207ENST00000549328 TNFSF8P32971 234 aa13.86□□□□□ -0.19
CHMP1A-207ENST00000549328 BSXQ3C1V8 233 aa13.86□□□□□ -0.19
CHMP1A-207ENST00000549328 ODF3L2Q3SX64 289 aa13.86□□□□□ -0.19
CHMP1A-207ENST00000549328 SELENOHQ8IZQ5 122 aaKnown RBP13.86□□□□□ -0.19
CHMP1A-207ENST00000549328 LHFPL5Q8TAF8 219 aa13.86□□□□□ -0.19
CHMP1A-207ENST00000549328 SCGB3A2Q96PL1 93 aa13.86□□□□□ -0.19
CHMP1A-207ENST00000549328 OVOL2Q9BRP0 275 aa13.86□□□□□ -0.19
CHMP1A-207ENST00000549328 SCP2D1Q9UJQ7 156 aa13.86□□□□□ -0.19
CHMP1A-207ENST00000549328 TMEM56-RWDD3S4R434 201 aa13.86□□□□□ -0.19
CHMP1A-207ENST00000549328 FABP12A6NFH5 140 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms