RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 VN1R17PQ8TDU5 208 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 LSM10Q969L4 123 aaKnown RBP9.06□□□□□ -0.96
DDX54-206ENST00000549271 MARC2Q969Z3 335 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 CXorf58Q96LI9 332 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 TSC22D3Q99576 134 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 MLXQ9UH92 298 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 F11RQ9Y624 299 aaKnown RBP9.06□□□□□ -0.96
DDX54-206ENST00000549271 GSTZ1O43708 216 aaPredicted RBP9.05□□□□□ -0.96
DDX54-206ENST00000549271 ELLP55199 621 aaPredicted RBP9.05□□□□□ -0.96
DDX54-206ENST00000549271 IL18Q14116 193 aa9.05□□□□□ -0.96
DDX54-206ENST00000549271 SCGB2B2Q4G0G5 96 aa9.05□□□□□ -0.96
DDX54-206ENST00000549271 UXS1Q8NBZ7 420 aa9.05□□□□□ -0.96
DDX54-206ENST00000549271 OR52B4Q8NGK2 314 aa9.05□□□□□ -0.96
DDX54-206ENST00000549271 ZFAND1Q8TCF1 268 aa9.05□□□□□ -0.96
DDX54-206ENST00000549271 CACNG8Q8WXS5 425 aa9.05□□□□□ -0.96
DDX54-206ENST00000549271 RTBDNQ9BSG5 229 aaPredicted RBP9.05□□□□□ -0.96
DDX54-206ENST00000549271 GGTLC1Q9BX51 225 aa9.05□□□□□ -0.96
DDX54-206ENST00000549271 C6orf62Q9GZU0 229 aaPredicted RBP9.05□□□□□ -0.96
DDX54-206ENST00000549271 THYN1Q9P016 225 aa9.05□□□□□ -0.96
DDX54-206ENST00000549271 RABL2AQ9UBK7 228 aaPredicted RBP9.05□□□□□ -0.96
DDX54-206ENST00000549271 RABL2BQ9UNT1 228 aa9.05□□□□□ -0.96
DDX54-206ENST00000549271 LOC102724200A0A096LPH7 203 aaPredicted RBP9.04□□□□□ -0.96
DDX54-206ENST00000549271 IGHV3-21A0A0B4J1V1 117 aa9.04□□□□□ -0.96
DDX54-206ENST00000549271 A0A0B4J293 547 aa9.04□□□□□ -0.96
DDX54-206ENST00000549271 C3orf85A0A1B0GTC6 90 aa9.04□□□□□ -0.96
DDX54-206ENST00000549271 ZNF320A2RRD8 509 aa9.04□□□□□ -0.96
DDX54-206ENST00000549271 F8W735 103 aaPredicted RBP9.04□□□□□ -0.96
DDX54-206ENST00000549271 K7EIM0 57 aa9.04□□□□□ -0.96
DDX54-206ENST00000549271 CTSDP07339 412 aaPredicted RBP9.04□□□□□ -0.96
DDX54-206ENST00000549271 GPR183P32249 361 aa9.04□□□□□ -0.96
DDX54-206ENST00000549271 HSPE1P61604 102 aaKnown RBP9.04□□□□□ -0.96
DDX54-206ENST00000549271 MEF2DQ14814 521 aa9.04□□□□□ -0.96
DDX54-206ENST00000549271 SP6Q3SY56 376 aa9.04□□□□□ -0.96
DDX54-206ENST00000549271 UNQ9165/PRO28630Q6UXU0 137 aa9.04□□□□□ -0.96
DDX54-206ENST00000549271 OR2C3Q8N628 320 aa9.04□□□□□ -0.96
DDX54-206ENST00000549271 OR4C16Q8NGL9 310 aa9.04□□□□□ -0.96
DDX54-206ENST00000549271 OR4A16Q8NH70 328 aa9.04□□□□□ -0.96
DDX54-206ENST00000549271 MCFD2Q8NI22 146 aa9.04□□□□□ -0.96
DDX54-206ENST00000549271 PHLDA1Q8WV24 401 aaPredicted RBP9.04□□□□□ -0.96
DDX54-206ENST00000549271 TMEM56Q96MV1 263 aa9.04□□□□□ -0.96
DDX54-206ENST00000549271 MRPL27Q9P0M9 148 aaKnown RBP9.04□□□□□ -0.96
DDX54-206ENST00000549271 COPZ2Q9P299 210 aa9.04□□□□□ -0.96
DDX54-206ENST00000549271 TP53TG1Q9Y2A0 90 aa9.04□□□□□ -0.96
DDX54-206ENST00000549271 IGHV3-35A0A0C4DH35 117 aa9.03□□□□□ -0.96
DDX54-206ENST00000549271 ANKRD20A5PA0PJZ0 165 aa9.03□□□□□ -0.96
DDX54-206ENST00000549271 DISC1C4P0D8 188 aa9.03□□□□□ -0.96
DDX54-206ENST00000549271 CYB5BO43169 146 aa9.03□□□□□ -0.96
DDX54-206ENST00000549271 NOL3O60936 208 aaKnown RBP9.03□□□□□ -0.96
DDX54-206ENST00000549271 AKAIN1P0CW23 69 aa9.03□□□□□ -0.96
DDX54-206ENST00000549271 UCP1P25874 307 aa9.03□□□□□ -0.96
DDX54-206ENST00000549271 PRCDQ00LT1 54 aa9.03□□□□□ -0.96
DDX54-206ENST00000549271 TM4SF20Q53R12 229 aa9.03□□□□□ -0.96
DDX54-206ENST00000549271 PLET1Q6UQ28 207 aa9.03□□□□□ -0.96
DDX54-206ENST00000549271 OR1P1Q8NH06 330 aa9.03□□□□□ -0.96
DDX54-206ENST00000549271 SCARB1Q8WTV0 552 aa9.03□□□□□ -0.96
DDX54-206ENST00000549271 ZNF414Q96IQ9 312 aa9.03□□□□□ -0.96
DDX54-206ENST00000549271 CHRDL1Q9BU40 450 aa9.03□□□□□ -0.96
DDX54-206ENST00000549271 ZNF436Q9C0F3 470 aaPredicted RBP9.03□□□□□ -0.96
DDX54-206ENST00000549271 C5orf66Q9H5L9 145 aa9.03□□□□□ -0.96
DDX54-206ENST00000549271 RSL24D1Q9UHA3 163 aaKnown RBP9.03□□□□□ -0.96
DDX54-206ENST00000549271 GPR132Q9UNW8 380 aa9.03□□□□□ -0.96
DDX54-206ENST00000549271 SELENOKQ9Y6D0 94 aa9.03□□□□□ -0.96
DDX54-206ENST00000549271 A0A0G2JRQ6 117 aa9.02□□□□□ -0.97
DDX54-206ENST00000549271 FABP12A6NFH5 140 aa9.02□□□□□ -0.97
DDX54-206ENST00000549271 OR2T8A6NH00 312 aa9.02□□□□□ -0.97
DDX54-206ENST00000549271 I3L2K1 104 aa9.02□□□□□ -0.97
DDX54-206ENST00000549271 TGOLN2O43493 480 aa9.02□□□□□ -0.97
DDX54-206ENST00000549271 SCAF4O95104 1147 aaKnown RBP9.02□□□□□ -0.97
DDX54-206ENST00000549271 ADMP35318 185 aa9.02□□□□□ -0.97
DDX54-206ENST00000549271 BTNL8Q6UX41 500 aa9.02□□□□□ -0.97
DDX54-206ENST00000549271 Q6ZRM9 215 aa9.02□□□□□ -0.97
DDX54-206ENST00000549271 Q6ZWC4 215 aa9.02□□□□□ -0.97
DDX54-206ENST00000549271 CCDC71LQ8N9Z2 235 aa9.02□□□□□ -0.97
DDX54-206ENST00000549271 ZNF114Q8NC26 417 aa9.02□□□□□ -0.97
DDX54-206ENST00000549271 OR51S1Q8NGJ8 323 aa9.02□□□□□ -0.97
DDX54-206ENST00000549271 OR1L6Q8NGR2 347 aa9.02□□□□□ -0.97
DDX54-206ENST00000549271 GLYATL2Q8WU03 294 aa9.02□□□□□ -0.97
DDX54-206ENST00000549271 ATP6V0BQ99437 205 aa9.02□□□□□ -0.97
DDX54-206ENST00000549271 RBM38Q9H0Z9 239 aaKnown RBP9.02□□□□□ -0.97
DDX54-206ENST00000549271 PLA2G2EQ9NZK7 142 aa9.02□□□□□ -0.97
DDX54-206ENST00000549271 UFC1Q9Y3C8 167 aa9.02□□□□□ -0.97
DDX54-206ENST00000549271 TEX13DA0A0J9YY54 714 aaPredicted RBP9.01□□□□□ -0.97
DDX54-206ENST00000549271 UBE2CO00762 179 aa9.01□□□□□ -0.97
DDX54-206ENST00000549271 ST8SIA3O43173 380 aa9.01□□□□□ -0.97
DDX54-206ENST00000549271 B3GALNT1O75752 331 aa9.01□□□□□ -0.97
DDX54-206ENST00000549271 CDS2O95674 445 aa9.01□□□□□ -0.97
DDX54-206ENST00000549271 CTSGP08311 255 aa9.01□□□□□ -0.97
DDX54-206ENST00000549271 OR5AC1P0C628 307 aa9.01□□□□□ -0.97
DDX54-206ENST00000549271 BMI1P35226 326 aa9.01□□□□□ -0.97
DDX54-206ENST00000549271 SURF2Q15527 256 aaPredicted RBP9.01□□□□□ -0.97
DDX54-206ENST00000549271 SPINK9Q5DT21 86 aa9.01□□□□□ -0.97
DDX54-206ENST00000549271 RBPMS2Q6ZRY4 209 aaKnown RBP9.01□□□□□ -0.97
DDX54-206ENST00000549271 LHFPL5Q8TAF8 219 aa9.01□□□□□ -0.97
DDX54-206ENST00000549271 BSCL2Q96G97 398 aaPredicted RBP9.01□□□□□ -0.97
DDX54-206ENST00000549271 SPAG8Q99932 426 aaPredicted RBP9.01□□□□□ -0.97
DDX54-206ENST00000549271 TMEM222Q9H0R3 208 aa9.01□□□□□ -0.97
DDX54-206ENST00000549271 C21orf62Q9NYP8 219 aa9.01□□□□□ -0.97
DDX54-206ENST00000549271 KIR2DL5BA0A0G2JN68 375 aa9□□□□□ -0.97
DDX54-206ENST00000549271 KIR2DL5BA0A0G2JPC4 375 aa9□□□□□ -0.97
DDX54-206ENST00000549271 CRYM-AS1A6NIL9 109 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms