RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 TRDV1A0A1B0GX56 115 aa10.5□□□□□ -0.73
RTN3-214ENST00000545432 DBX1A6NMT0 343 aa10.5□□□□□ -0.73
RTN3-214ENST00000545432 CASQ2O14958 399 aaPredicted RBP10.5□□□□□ -0.73
RTN3-214ENST00000545432 MT-CO2P00403 227 aa10.5□□□□□ -0.73
RTN3-214ENST00000545432 EIF4EP06730 217 aaKnown RBP10.5□□□□□ -0.73
RTN3-214ENST00000545432 PTHLHP12272 177 aa10.5□□□□□ -0.73
RTN3-214ENST00000545432 F2RP25116 425 aa10.5□□□□□ -0.73
RTN3-214ENST00000545432 GNG2P59768 71 aa10.5□□□□□ -0.73
RTN3-214ENST00000545432 ARPC4P59998 168 aa10.5□□□□□ -0.73
RTN3-214ENST00000545432 RCN1Q15293 331 aa10.5□□□□□ -0.73
RTN3-214ENST00000545432 ZNF767PQ75MW2 155 aa10.5□□□□□ -0.73
RTN3-214ENST00000545432 CCDC90BQ9GZT6 254 aa10.5□□□□□ -0.73
RTN3-214ENST00000545432 PRNDQ9UKY0 176 aa10.5□□□□□ -0.73
RTN3-214ENST00000545432 NSG2Q9Y328 171 aa10.5□□□□□ -0.73
RTN3-214ENST00000545432 TPRKBQ9Y3C4 175 aa10.5□□□□□ -0.73
RTN3-214ENST00000545432 C16orf90A8MZG2 172 aa10.49□□□□□ -0.73
RTN3-214ENST00000545432 ERVK-16P61578 105 aa10.49□□□□□ -0.73
RTN3-214ENST00000545432 ZNF600Q6ZNG1 722 aa10.49□□□□□ -0.73
RTN3-214ENST00000545432 PRSS48Q7RTY5 328 aa10.49□□□□□ -0.73
RTN3-214ENST00000545432 OR51H1Q8NH63 302 aa10.49□□□□□ -0.73
RTN3-214ENST00000545432 HINT2Q9BX68 163 aa10.49□□□□□ -0.73
RTN3-214ENST00000545432 TMEM231Q9H6L2 316 aa10.49□□□□□ -0.73
RTN3-214ENST00000545432 CLEC5AQ9NY25 188 aa10.49□□□□□ -0.73
RTN3-214ENST00000545432 KNCNA6PVL3 124 aa10.48□□□□□ -0.73
RTN3-214ENST00000545432 RGS10O43665 173 aa10.48□□□□□ -0.73
RTN3-214ENST00000545432 GNG7O60262 68 aa10.48□□□□□ -0.73
RTN3-214ENST00000545432 PGLYRP1O75594 196 aaPredicted RBP10.48□□□□□ -0.73
RTN3-214ENST00000545432 SNAPC5O75971 98 aa10.48□□□□□ -0.73
RTN3-214ENST00000545432 TMEM50AO95807 157 aa10.48□□□□□ -0.73
RTN3-214ENST00000545432 CRYBB3P26998 211 aa10.48□□□□□ -0.73
RTN3-214ENST00000545432 FAM3BP58499 235 aaPredicted RBP10.48□□□□□ -0.73
RTN3-214ENST00000545432 TNP2Q05952 138 aa10.48□□□□□ -0.73
RTN3-214ENST00000545432 AADACL3Q5VUY0 350 aa10.48□□□□□ -0.73
RTN3-214ENST00000545432 DHRS11Q6UWP2 260 aa10.48□□□□□ -0.73
RTN3-214ENST00000545432 ZNF705AQ6ZN79 300 aaPredicted RBP10.48□□□□□ -0.73
RTN3-214ENST00000545432 FCAMRQ8WWV6 532 aa10.48□□□□□ -0.73
RTN3-214ENST00000545432 PUS1Q9Y606 427 aaKnown RBP eCLIP10.48□□□□□ -0.73
RTN3-214ENST00000545432 NACAE9PAV3 2078 aa10.47□□□□□ -0.73
RTN3-214ENST00000545432 A0A1B0GU03 582 aa10.47□□□□□ -0.73
RTN3-214ENST00000545432 A0A1W2PS18 150 aa10.47□□□□□ -0.73
RTN3-214ENST00000545432 NOTOA8MTQ0 251 aa10.47□□□□□ -0.73
RTN3-214ENST00000545432 KRASP01116 189 aa10.47□□□□□ -0.73
RTN3-214ENST00000545432 MYL9P24844 172 aa10.47□□□□□ -0.73
RTN3-214ENST00000545432 LPAR6P43657 344 aa10.47□□□□□ -0.73
RTN3-214ENST00000545432 NPBWR1P48145 328 aa10.47□□□□□ -0.73
RTN3-214ENST00000545432 KCTD21Q4G0X4 260 aa10.47□□□□□ -0.73
RTN3-214ENST00000545432 ZNF367Q7RTV3 350 aa10.47□□□□□ -0.73
RTN3-214ENST00000545432 BORCS5Q969J3 196 aa10.47□□□□□ -0.73
RTN3-214ENST00000545432 MISP3Q96FF7 219 aa10.47□□□□□ -0.73
RTN3-214ENST00000545432 RAB40CQ96S21 281 aa10.47□□□□□ -0.73
RTN3-214ENST00000545432 TSC22D3Q99576 134 aa10.47□□□□□ -0.73
RTN3-214ENST00000545432 RABAC1Q9UI14 185 aa10.47□□□□□ -0.73
RTN3-214ENST00000545432 IGHV3-66A0A0C4DH42 116 aa10.46□□□□□ -0.73
RTN3-214ENST00000545432 ZNF705FA8MVS1 300 aaPredicted RBP10.46□□□□□ -0.73
RTN3-214ENST00000545432 IGHV3-48P01763 117 aa10.46□□□□□ -0.73
RTN3-214ENST00000545432 ZNF688P0C7X2 276 aa10.46□□□□□ -0.73
RTN3-214ENST00000545432 ZNF705DP0CH99 300 aaPredicted RBP10.46□□□□□ -0.73
RTN3-214ENST00000545432 ZNF705BP0CI00 300 aaPredicted RBP10.46□□□□□ -0.73
RTN3-214ENST00000545432 SPART-AS1P0CW21 52 aa10.46□□□□□ -0.73
RTN3-214ENST00000545432 NPPCP23582 126 aa10.46□□□□□ -0.73
RTN3-214ENST00000545432 FGF9P31371 208 aaPredicted RBP10.46□□□□□ -0.73
RTN3-214ENST00000545432 G6PCP35575 357 aa10.46□□□□□ -0.73
RTN3-214ENST00000545432 RPL11P62913 178 aaKnown RBP10.46□□□□□ -0.73
RTN3-214ENST00000545432 OXA1LQ15070 435 aa10.46□□□□□ -0.73
RTN3-214ENST00000545432 ACTL10Q5JWF8 245 aa10.46□□□□□ -0.73
RTN3-214ENST00000545432 OR5AP2Q8NGF4 316 aa10.46□□□□□ -0.73
RTN3-214ENST00000545432 C1QTNF4Q9BXJ3 329 aa10.46□□□□□ -0.73
RTN3-214ENST00000545432 SEPSECSQ9HD40 501 aaKnown RBP10.46□□□□□ -0.73
RTN3-214ENST00000545432 FAM212BQ9NTI7 297 aaPredicted RBP10.46□□□□□ -0.73
RTN3-214ENST00000545432 NDUFB11Q9NX14 153 aa10.46□□□□□ -0.73
RTN3-214ENST00000545432 U3KQE9 123 aa10.46□□□□□ -0.73
RTN3-214ENST00000545432 TMEM189A5PLL7 270 aa10.45□□□□□ -0.74
RTN3-214ENST00000545432 SMIM9A6NGZ8 99 aa10.45□□□□□ -0.74
RTN3-214ENST00000545432 INS-IGF2F8WCM5 200 aa10.45□□□□□ -0.74
RTN3-214ENST00000545432 FXYD4P59646 89 aa10.45□□□□□ -0.74
RTN3-214ENST00000545432 PRCDQ00LT1 54 aa10.45□□□□□ -0.74
RTN3-214ENST00000545432 TBCEQ15813 527 aaPredicted RBP10.45□□□□□ -0.74
RTN3-214ENST00000545432 UBE2DNLQ8IWF7 75 aa10.45□□□□□ -0.74
RTN3-214ENST00000545432 NUTF2P61970 127 aaKnown RBP10.44□□□□□ -0.74
RTN3-214ENST00000545432 TPRA1Q86W33 373 aa10.44□□□□□ -0.74
RTN3-214ENST00000545432 STXBP6Q8NFX7 210 aa10.44□□□□□ -0.74
RTN3-214ENST00000545432 SEC22AQ96IW7 307 aa10.44□□□□□ -0.74
RTN3-214ENST00000545432 SCRT2Q9NQ03 307 aa10.44□□□□□ -0.74
RTN3-214ENST00000545432 RHBDL2Q9NX52 303 aa10.44□□□□□ -0.74
RTN3-214ENST00000545432 DKK2Q9UBU2 259 aa10.44□□□□□ -0.74
RTN3-214ENST00000545432 DMBT1Q9UGM3 2413 aaPredicted RBP10.44□□□□□ -0.74
RTN3-214ENST00000545432 A0A0A6YYH2 397 aa10.43□□□□□ -0.74
RTN3-214ENST00000545432 TEX48A0A1B0GUV7 120 aa10.43□□□□□ -0.74
RTN3-214ENST00000545432 A6NJ64 397 aa10.43□□□□□ -0.74
RTN3-214ENST00000545432 H3BMM0 161 aa10.43□□□□□ -0.74
RTN3-214ENST00000545432 EBAG9O00559 213 aa10.43□□□□□ -0.74
RTN3-214ENST00000545432 RLN1P04808 185 aa10.43□□□□□ -0.74
RTN3-214ENST00000545432 P2RY1P47900 373 aa10.43□□□□□ -0.74
RTN3-214ENST00000545432 SCAND1P57086 179 aa10.43□□□□□ -0.74
RTN3-214ENST00000545432 HSPE1P61604 102 aaKnown RBP10.43□□□□□ -0.74
RTN3-214ENST00000545432 C22orf42Q6IC83 251 aa10.43□□□□□ -0.74
RTN3-214ENST00000545432 TMEM17Q86X19 198 aa10.43□□□□□ -0.74
RTN3-214ENST00000545432 MOB3AQ96BX8 217 aa10.43□□□□□ -0.74
RTN3-214ENST00000545432 RNF167Q9H6Y7 350 aa10.43□□□□□ -0.74
RTN3-214ENST00000545432 AUNIPQ9H7T9 357 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms