RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 FKBP11Q9NYL4 201 aa12.87□□□□□ -0.35
SNRNP70-203ENST00000544278 C15orf61A6NNL5 157 aa12.86□□□□□ -0.35
SNRNP70-203ENST00000544278 TMEM200BQ69YZ2 307 aa12.86□□□□□ -0.35
SNRNP70-203ENST00000544278 RNASE8Q8TDE3 154 aaKnown RBP12.86□□□□□ -0.35
SNRNP70-203ENST00000544278 HARBI1Q96MB7 349 aa12.86□□□□□ -0.35
SNRNP70-203ENST00000544278 UHRF2Q96PU4 802 aa12.86□□□□□ -0.35
SNRNP70-203ENST00000544278 CTSZQ9UBR2 303 aa12.86□□□□□ -0.35
SNRNP70-203ENST00000544278 TRAV5A0A0B4J249 113 aa12.86□□□□□ -0.35
SNRNP70-203ENST00000544278 C17orf100A8MU93 164 aa12.86□□□□□ -0.35
SNRNP70-203ENST00000544278 MORN5Q5VZ52 161 aa12.86□□□□□ -0.35
SNRNP70-203ENST00000544278 CLEC2AQ6UVW9 174 aa12.86□□□□□ -0.35
SNRNP70-203ENST00000544278 CYP2G1PQ6ZSU1 146 aa12.86□□□□□ -0.35
SNRNP70-203ENST00000544278 TUBG2Q9NRH3 451 aa12.86□□□□□ -0.35
SNRNP70-203ENST00000544278 ZFHX3Q15911 3703 aa12.86□□□□□ -0.35
SNRNP70-203ENST00000544278 A0A087WWC5 75 aa12.86□□□□□ -0.35
SNRNP70-203ENST00000544278 H3BTX0 84 aa12.86□□□□□ -0.35
SNRNP70-203ENST00000544278 DNAJC4Q9NNZ3 241 aa12.86□□□□□ -0.35
SNRNP70-203ENST00000544278 PAX1P15863 534 aa12.85□□□□□ -0.35
SNRNP70-203ENST00000544278 HSPE1P61604 102 aaKnown RBP12.85□□□□□ -0.35
SNRNP70-203ENST00000544278 RUSC1-AS1Q66K80 236 aa12.85□□□□□ -0.35
SNRNP70-203ENST00000544278 TOMM20LQ6UXN7 152 aa12.85□□□□□ -0.35
SNRNP70-203ENST00000544278 C11orf42Q8N5U0 333 aa12.85□□□□□ -0.35
SNRNP70-203ENST00000544278 POLR3KQ9Y2Y1 108 aaPredicted RBP12.85□□□□□ -0.35
SNRNP70-203ENST00000544278 VPS13CQ709C8 3753 aa12.85□□□□□ -0.35
SNRNP70-203ENST00000544278 CRYBG3Q68DQ2 2970 aa12.85□□□□□ -0.35
SNRNP70-203ENST00000544278 PPP5D1E7EU14 171 aa12.85□□□□□ -0.35
SNRNP70-203ENST00000544278 OR10J1P30954 320 aa12.85□□□□□ -0.35
SNRNP70-203ENST00000544278 CDSNQ15517 529 aa12.85□□□□□ -0.35
SNRNP70-203ENST00000544278 HCP5Q6MZN7 132 aa12.85□□□□□ -0.35
SNRNP70-203ENST00000544278 TMEM256Q8N2U0 113 aa12.85□□□□□ -0.35
SNRNP70-203ENST00000544278 OR10X1Q8NGY0 326 aa12.85□□□□□ -0.35
SNRNP70-203ENST00000544278 PIGBOS1A0A0B4J2F0 54 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 CD24P25063 80 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 CNTFRP26992 372 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 EFNB3Q15768 340 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 IQCJQ1A5X6 159 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 OR5B12Q96R08 314 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 PLEKHA3Q9HB20 300 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 LPAR2Q9HBW0 351 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 RPUSD1Q9UJJ7 312 aaKnown RBP12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 TIMM9Q9Y5J7 89 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 OR7C2O60412 319 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 ZNF439Q8NDP4 499 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 TMEM18Q96B42 140 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 IMMP2LQ96T52 175 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 LOC102724200A0A096LPH7 203 aaPredicted RBP12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 TRAV34A0A0B4J273 112 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 PRSS46E5RG02 174 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 COX7A1P24310 79 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 PSG5Q15238 335 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 HLA-DRB5Q30154 266 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 TRAT1Q6PIZ9 186 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 ERASQ7Z444 233 aa12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 GSX1Q9H4S2 264 aaPredicted RBP12.84□□□□□ -0.35
SNRNP70-203ENST00000544278 UTP20O75691 2785 aaKnown RBP12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 TEX50A0A1B0GTY4 177 aa12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 VSTM5A8MXK1 200 aa12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 SLC25A17O43808 307 aa12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 NUPR1O60356 82 aa12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 PFN1P07737 140 aaKnown RBP12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 PPIAL4EA0A075B759 164 aa12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 ZNF320A2RRD8 509 aa12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 E7EQL1 145 aa12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 PPIAL4DF5H284 164 aa12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 PPIAL4FP0DN26 164 aa12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 CFHR2P36980 270 aa12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 TEPPQ6URK8 271 aa12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 LINC00479Q96M42 142 aa12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 P2RX4Q99571 388 aa12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.83□□□□□ -0.364e-41■■□□□ 13.1
SNRNP70-203ENST00000544278 ITPR1Q14643 2758 aa12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 TCL1AP56279 114 aa12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 CENPVQ7Z7K6 275 aaPredicted RBP12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 KIR3DL3Q8N743 410 aa12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 NPVFQ9HCQ7 196 aa12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 MRPL36Q9P0J6 103 aaKnown RBP12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 RNF24Q9Y225 148 aa12.83□□□□□ -0.36
SNRNP70-203ENST00000544278 hADV38S2A0JD32 116 aa12.82□□□□□ -0.36
SNRNP70-203ENST00000544278 GRIFINA4D1Z8 144 aa12.82□□□□□ -0.36
SNRNP70-203ENST00000544278 J3KRW8 73 aa12.82□□□□□ -0.36
SNRNP70-203ENST00000544278 GCGP01275 180 aa12.82□□□□□ -0.36
SNRNP70-203ENST00000544278 RAB7AP51149 207 aa12.82□□□□□ -0.36
SNRNP70-203ENST00000544278 PNRC1Q12796 327 aaPredicted RBP12.82□□□□□ -0.36
SNRNP70-203ENST00000544278 FXYD3Q14802 87 aa12.82□□□□□ -0.36
SNRNP70-203ENST00000544278 LINC01551Q86U37 167 aa12.82□□□□□ -0.36
SNRNP70-203ENST00000544278 OCC1Q8TAD7 63 aa12.82□□□□□ -0.36
SNRNP70-203ENST00000544278 MS4A10Q96PG2 267 aa12.82□□□□□ -0.36
SNRNP70-203ENST00000544278 PIEZO1Q92508 2521 aa12.82□□□□□ -0.36
SNRNP70-203ENST00000544278 VWC2Q2TAL6 325 aa12.82□□□□□ -0.36
SNRNP70-203ENST00000544278 ZNF714Q96N38 554 aa12.82□□□□□ -0.36
SNRNP70-203ENST00000544278 TMEM106BQ9NUM4 274 aa12.82□□□□□ -0.36
SNRNP70-203ENST00000544278 TOX4O94842 621 aa12.81□□□□□ -0.36
SNRNP70-203ENST00000544278 TBR1Q16650 682 aa12.81□□□□□ -0.36
SNRNP70-203ENST00000544278 TMEM14BQ9NUH8 114 aa12.81□□□□□ -0.36
SNRNP70-203ENST00000544278 CBY3A6NI87 242 aa12.81□□□□□ -0.36
SNRNP70-203ENST00000544278 CRYBB3P26998 211 aa12.81□□□□□ -0.36
SNRNP70-203ENST00000544278 SGMS2Q8NHU3 365 aa12.81□□□□□ -0.36
SNRNP70-203ENST00000544278 FAM222BQ8WU58 562 aa12.81□□□□□ -0.36
SNRNP70-203ENST00000544278 NAGKQ9UJ70 344 aa12.81□□□□□ -0.36
SNRNP70-203ENST00000544278 RPH3ALQ9UNE2 315 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms