RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 VMA21Q3ZAQ7 101 aa14.39□□□□□ -0.11
PTPN6-222ENST00000543744 C11orf42Q8N5U0 333 aa14.39□□□□□ -0.11
PTPN6-222ENST00000543744 C11orf52Q96A22 123 aa14.39□□□□□ -0.11
PTPN6-222ENST00000543744 ACY3Q96HD9 319 aa14.39□□□□□ -0.11
PTPN6-222ENST00000543744 ARL2-SNX15V9GYD0 113 aa14.39□□□□□ -0.11
PTPN6-222ENST00000543744 KALRNO60229 2985 aa14.39□□□□□ -0.11
PTPN6-222ENST00000543744 FAM90A27PA6NNH2 459 aa14.39□□□□□ -0.11
PTPN6-222ENST00000543744 WT1-ASQ06250 92 aa14.39□□□□□ -0.11
PTPN6-222ENST00000543744 PYY3Q5JQD4 70 aa14.39□□□□□ -0.11
PTPN6-222ENST00000543744 OR2T6Q8NHC8 308 aa14.39□□□□□ -0.11
PTPN6-222ENST00000543744 OCC1Q8TAD7 63 aa14.39□□□□□ -0.11
PTPN6-222ENST00000543744 BTF3L4Q96K17 158 aa14.39□□□□□ -0.11
PTPN6-222ENST00000543744 RALYQ9UKM9 306 aaKnown RBP14.39□□□□□ -0.11
PTPN6-222ENST00000543744 SLC25A17O43808 307 aa14.38□□□□□ -0.11
PTPN6-222ENST00000543744 OR5G3P0C626 314 aa14.38□□□□□ -0.11
PTPN6-222ENST00000543744 AREGP15514 252 aa14.38□□□□□ -0.11
PTPN6-222ENST00000543744 SUB1P53999 127 aaKnown RBP eCLIP14.38□□□□□ -0.11
PTPN6-222ENST00000543744 TAS2R45P59539 299 aa14.38□□□□□ -0.11
PTPN6-222ENST00000543744 C10orf55Q5SWW7 151 aa14.38□□□□□ -0.11
PTPN6-222ENST00000543744 PQLC2Q6ZP29 291 aa14.38□□□□□ -0.11
PTPN6-222ENST00000543744 CHODLQ9H9P2 273 aa14.38□□□□□ -0.11
PTPN6-222ENST00000543744 PTPRQQ9UMZ3 2332 aa14.38□□□□□ -0.11
PTPN6-222ENST00000543744 CGB1A6NKQ9 187 aa14.37□□□□□ -0.11
PTPN6-222ENST00000543744 ENSAO43768 121 aaKnown RBP14.37□□□□□ -0.11
PTPN6-222ENST00000543744 OR7C2O60412 319 aa14.37□□□□□ -0.11
PTPN6-222ENST00000543744 FABP4P15090 132 aa14.37□□□□□ -0.11
PTPN6-222ENST00000543744 HNF1AP20823 631 aa14.37□□□□□ -0.11
PTPN6-222ENST00000543744 FOXL1Q12952 345 aa14.37□□□□□ -0.11
PTPN6-222ENST00000543744 ACTL10Q5JWF8 245 aa14.37□□□□□ -0.11
PTPN6-222ENST00000543744 MUC15Q8N387 334 aa14.37□□□□□ -0.11
PTPN6-222ENST00000543744 RNASEH2CQ8TDP1 164 aaKnown RBP14.37□□□□□ -0.11
PTPN6-222ENST00000543744 LYNX1G3V0Z9 82 aa14.37□□□□□ -0.11
PTPN6-222ENST00000543744 LYNX1P0DP58 116 aa14.37□□□□□ -0.11
PTPN6-222ENST00000543744 CA7P43166 264 aa14.37□□□□□ -0.11
PTPN6-222ENST00000543744 LGALS7P47929 136 aa14.37□□□□□ -0.11
PTPN6-222ENST00000543744 PPOXP50336 477 aa14.37□□□□□ -0.11
PTPN6-222ENST00000543744 TMEM183AQ8IXX5 376 aa14.37□□□□□ -0.11
PTPN6-222ENST00000543744 TNFRSF14Q92956 283 aa14.37□□□□□ -0.11
PTPN6-222ENST00000543744 RITA1Q96K30 269 aa14.37□□□□□ -0.11
PTPN6-222ENST00000543744 FBXL19-AS1Q494R0 122 aa14.36□□□□□ -0.11
PTPN6-222ENST00000543744 TEX38Q6PEX7 206 aa14.36□□□□□ -0.11
PTPN6-222ENST00000543744 OR10G8Q8NGN5 311 aa14.36□□□□□ -0.11
PTPN6-222ENST00000543744 SGMS2Q8NHU3 365 aa14.36□□□□□ -0.11
PTPN6-222ENST00000543744 ARFGEF3Q5TH69 2177 aa14.36□□□□□ -0.11
PTPN6-222ENST00000543744 A0A0U1RQK1 487 aa14.36□□□□□ -0.11
PTPN6-222ENST00000543744 ZNF320A2RRD8 509 aa14.36□□□□□ -0.11
PTPN6-222ENST00000543744 XKRY2A2RUG3 117 aa14.36□□□□□ -0.11
PTPN6-222ENST00000543744 C9JCJ5 164 aa14.36□□□□□ -0.11
PTPN6-222ENST00000543744 TMEM37Q8WXS4 190 aa14.36□□□□□ -0.11
PTPN6-222ENST00000543744 ZNF503Q96F45 646 aa14.36□□□□□ -0.11
PTPN6-222ENST00000543744 SLC25A33Q9BSK2 321 aa14.36□□□□□ -0.11
PTPN6-222ENST00000543744 IGHV3-72A0A0B4J1Y9 119 aa14.35□□□□□ -0.11
PTPN6-222ENST00000543744 CCL21O00585 134 aa14.35□□□□□ -0.11
PTPN6-222ENST00000543744 C8orf88P0DMB2 117 aa14.35□□□□□ -0.11
PTPN6-222ENST00000543744 GRNP28799 593 aaKnown RBP14.35□□□□□ -0.11
PTPN6-222ENST00000543744 PRRX1P54821 245 aa14.35□□□□□ -0.11
PTPN6-222ENST00000543744 OR1P1Q8NH06 330 aa14.35□□□□□ -0.11
PTPN6-222ENST00000543744 MRPL32Q9BYC8 188 aaKnown RBP14.35□□□□□ -0.11
PTPN6-222ENST00000543744 TPSG1Q9NRR2 321 aa14.35□□□□□ -0.11
PTPN6-222ENST00000543744 LY96Q9Y6Y9 160 aa14.35□□□□□ -0.11
PTPN6-222ENST00000543744 POLEQ07864 2286 aa14.35□□□□□ -0.11
PTPN6-222ENST00000543744 IGHV2-26A0A0B4J1V2 119 aa14.34□□□□□ -0.11
PTPN6-222ENST00000543744 UCNP55089 124 aa14.34□□□□□ -0.11
PTPN6-222ENST00000543744 CTAG1AP78358 180 aa14.34□□□□□ -0.11
PTPN6-222ENST00000543744 RNF2Q99496 336 aa14.34□□□□□ -0.11
PTPN6-222ENST00000543744 HIST1H2BLQ99880 126 aa14.34□□□□□ -0.11
PTPN6-222ENST00000543744 FNDC4Q9H6D8 234 aaPredicted RBP14.34□□□□□ -0.11
PTPN6-222ENST00000543744 DNAJC4Q9NNZ3 241 aa14.34□□□□□ -0.11
PTPN6-222ENST00000543744 LINC00587B1AMM8 73 aa14.34□□□□□ -0.11
PTPN6-222ENST00000543744 K7EN84 100 aa14.34□□□□□ -0.11
PTPN6-222ENST00000543744 OR10J4P0C629 311 aa14.34□□□□□ -0.11
PTPN6-222ENST00000543744 COA6Q5JTJ3 125 aaKnown RBP14.34□□□□□ -0.11
PTPN6-222ENST00000543744 ZNF841Q6ZN19 808 aa14.34□□□□□ -0.11
PTPN6-222ENST00000543744 NPIPB3Q92617 1050 aa14.34□□□□□ -0.11
PTPN6-222ENST00000543744 EAF1Q96JC9 268 aaPredicted RBP14.34□□□□□ -0.11
PTPN6-222ENST00000543744 PACRGQ96M98 296 aaPredicted RBP14.34□□□□□ -0.11
PTPN6-222ENST00000543744 A0A1W2PPI3 338 aa14.33□□□□□ -0.12
PTPN6-222ENST00000543744 HELTA6NFD8 242 aa14.33□□□□□ -0.12
PTPN6-222ENST00000543744 CRYBB3P26998 211 aa14.33□□□□□ -0.12
PTPN6-222ENST00000543744 SSBP2P81877 361 aaPredicted RBP14.33□□□□□ -0.12
PTPN6-222ENST00000543744 ZNF672Q499Z4 452 aaPredicted RBP14.33□□□□□ -0.12
PTPN6-222ENST00000543744 MRPL41Q8IXM3 137 aaKnown RBP14.33□□□□□ -0.12
PTPN6-222ENST00000543744 TEX45Q8NA69 505 aa14.33□□□□□ -0.12
PTPN6-222ENST00000543744 RAXQ9Y2V3 346 aa14.33□□□□□ -0.12
PTPN6-222ENST00000543744 PSMB11A5LHX3 300 aa14.32□□□□□ -0.12
PTPN6-222ENST00000543744 SIAH2O43255 324 aa14.32□□□□□ -0.12
PTPN6-222ENST00000543744 FSTL3O95633 263 aa14.32□□□□□ -0.12
PTPN6-222ENST00000543744 IGLV1-47P01700 117 aa14.32□□□□□ -0.12
PTPN6-222ENST00000543744 IGHV2-70P01814 119 aa14.32□□□□□ -0.12
PTPN6-222ENST00000543744 DLX1P56177 255 aa14.32□□□□□ -0.12
PTPN6-222ENST00000543744 MRGPRG-AS1Q2M3A8 158 aa14.32□□□□□ -0.12
PTPN6-222ENST00000543744 CLEC7AQ9BXN2 247 aa14.32□□□□□ -0.12
PTPN6-222ENST00000543744 TCRBV4S1A1TA0A5B7 111 aa14.32□□□□□ -0.12
PTPN6-222ENST00000543744 COX7A2P2O60397 106 aa14.32□□□□□ -0.12
PTPN6-222ENST00000543744 IGHV3-48P01763 117 aa14.32□□□□□ -0.12
PTPN6-222ENST00000543744 REG1AP05451 166 aa14.32□□□□□ -0.12
PTPN6-222ENST00000543744 GNG4P50150 75 aa14.32□□□□□ -0.12
PTPN6-222ENST00000543744 RPL15P61313 204 aaKnown RBP14.32□□□□□ -0.12
PTPN6-222ENST00000543744 PRSS8Q16651 343 aa14.32□□□□□ -0.12
PTPN6-222ENST00000543744 MMD2Q8IY49 270 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms