RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 OR1P1Q8NH06 330 aa5.32□□□□□ -1.56
PTPRO-208ENST00000542557 RND1Q92730 232 aa5.32□□□□□ -1.56
PTPRO-208ENST00000542557 ST6GALNAC6Q969X2 333 aa5.32□□□□□ -1.56
PTPRO-208ENST00000542557 FLYWCH2Q96CP2 140 aaKnown RBP5.32□□□□□ -1.56
PTPRO-208ENST00000542557 COMMD5Q9GZQ3 224 aa5.32□□□□□ -1.56
PTPRO-208ENST00000542557 ZNRD1Q9P1U0 126 aa5.32□□□□□ -1.56
PTPRO-208ENST00000542557 IGKV1OR2-108A0A075B7D4 117 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 SHISA9B4DS77 424 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 IL3RAP26951 378 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 LOXP28300 417 aaPredicted RBP5.31□□□□□ -1.56
PTPRO-208ENST00000542557 ERHP84090 104 aaKnown RBP5.31□□□□□ -1.56
PTPRO-208ENST00000542557 RBPJQ06330 500 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 GAMTQ14353 236 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 TBR1Q16650 682 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 TMEM155Q4W5P6 130 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 FAM78BQ5VT40 261 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 TEX38Q6PEX7 206 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 PQLC2Q6ZP29 291 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 SPACA3Q8IXA5 215 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 DMRTC2Q8IXT2 367 aaPredicted RBP5.31□□□□□ -1.56
PTPRO-208ENST00000542557 ZCCHC24Q8N2G6 241 aaKnown RBP5.31□□□□□ -1.56
PTPRO-208ENST00000542557 OR4P4Q8NGL7 312 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 OR10X1Q8NGY0 326 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 RNASEH2CQ8TDP1 164 aaKnown RBP5.31□□□□□ -1.56
PTPRO-208ENST00000542557 PACRGQ96M98 296 aaPredicted RBP5.31□□□□□ -1.56
PTPRO-208ENST00000542557 RNF2Q99496 336 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 HIST1H2BLQ99880 126 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 MRPL32Q9BYC8 188 aaKnown RBP5.31□□□□□ -1.56
PTPRO-208ENST00000542557 TECRQ9NZ01 308 aaKnown RBP5.31□□□□□ -1.56
PTPRO-208ENST00000542557 MGAQ8IWI9 3026 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 GVINP1Q7Z2Y8 2422 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 H0Y8G0 127 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 FABP4P15090 132 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 HIST1H1BP16401 226 aaKnown RBP5.31□□□□□ -1.56
PTPRO-208ENST00000542557 TAS2R45P59539 299 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 RPL15P61313 204 aaKnown RBP5.31□□□□□ -1.56
PTPRO-208ENST00000542557 HLA-DRB5Q30154 266 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 MIR17HGQ75NE6 70 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 CCL17Q92583 94 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 NEU1Q99519 415 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 DYNLRB1Q9NP97 96 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 CTSZQ9UBR2 303 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 WASHC3Q9Y3C0 194 aa5.31□□□□□ -1.56
PTPRO-208ENST00000542557 E7EQL1 145 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 K7ENP7 123 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 DVL1O14640 695 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 TNFRSF6BO95407 300 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 CHRNB4P30926 498 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 OR10J1P30954 320 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 PDZD11Q5EBL8 140 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 OR9G1Q8NH87 305 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 H1FXQ92522 213 aaKnown RBP5.3□□□□□ -1.56
PTPRO-208ENST00000542557 TNFRSF14Q92956 283 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 WFIKKN1Q96NZ8 548 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 PFDN5Q99471 154 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 VKORC1Q9BQB6 163 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 LAMA5O15230 3695 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 CEP250Q9BV73 2442 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 PSMB11A5LHX3 300 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 FOXH1O75593 365 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 FSTL3O95633 263 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 IGLV2-23P01705 113 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 MC5RP33032 325 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 PSG5Q15238 335 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 LYPD2Q6UXB3 125 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 MOB3BQ86TA1 216 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 OR5T1Q8NG75 326 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 OR10G8Q8NGN5 311 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 OR5R1Q8NH85 324 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 SGMS2Q8NHU3 365 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 OCC1Q8TAD7 63 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 RIF1Q5UIP0 2472 aaKnown RBP5.3□□□□□ -1.56
PTPRO-208ENST00000542557 RP1L1Q8IWN7 2480 aaPredicted RBP5.3□□□□□ -1.56
PTPRO-208ENST00000542557 YLPM1P49750 1951 aaKnown RBP5.3□□□□□ -1.56
PTPRO-208ENST00000542557 A0A1W2PRE2 83 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 IGHV1-8P0DP01 117 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 APOBEC3AP31941 199 aaPredicted RBP5.3□□□□□ -1.56
PTPRO-208ENST00000542557 SUB1P53999 127 aaKnown RBP eCLIP5.3□□□□□ -1.56
PTPRO-208ENST00000542557 YPEL3P61236 119 aaPredicted RBP5.3□□□□□ -1.56
PTPRO-208ENST00000542557 VMA21Q3ZAQ7 101 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 C9orf152Q5JTZ5 239 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 ETFRF1Q6IPR1 90 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 TGIF2LXQ8IUE1 241 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 OR10W1Q8NGF6 305 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 FAM122AQ96E09 287 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 ZNF503Q96F45 646 aa5.3□□□□□ -1.56
PTPRO-208ENST00000542557 ZFHX2Q9C0A1 2572 aaPredicted RBP5.29□□□□□ -1.56
PTPRO-208ENST00000542557 ICE1Q9Y2F5 2266 aa5.29□□□□□ -1.56
PTPRO-208ENST00000542557 IGHV1-69-2A0A0G2JMI3 117 aa5.29□□□□□ -1.56
PTPRO-208ENST00000542557 CGB1A6NKQ9 187 aa5.29□□□□□ -1.56
PTPRO-208ENST00000542557 K7EN84 100 aa5.29□□□□□ -1.56
PTPRO-208ENST00000542557 AMBPP02760 352 aa5.29□□□□□ -1.56
PTPRO-208ENST00000542557 OR10J4P0C629 311 aa5.29□□□□□ -1.56
PTPRO-208ENST00000542557 C8orf88P0DMB2 117 aa5.29□□□□□ -1.56
PTPRO-208ENST00000542557 LGALS7P47929 136 aa5.29□□□□□ -1.56
PTPRO-208ENST00000542557 CNN1P51911 297 aaKnown RBP5.29□□□□□ -1.56
PTPRO-208ENST00000542557 CLEC12BQ2HXU8 276 aa5.29□□□□□ -1.56
PTPRO-208ENST00000542557 PRR30Q53SZ7 412 aaPredicted RBP5.29□□□□□ -1.56
PTPRO-208ENST00000542557 PVRIGQ6DKI7 326 aa5.29□□□□□ -1.56
PTPRO-208ENST00000542557 THAP8Q8NA92 274 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms