RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 EIF4EP06730 217 aaKnown RBP11.3□□□□□ -0.6
RTN3-211ENST00000542238 SDC2P34741 201 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 G6PCP35575 357 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 MFAP4P55083 255 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 PRR20EP86478 221 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 PRR20CP86479 221 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 PRR20DP86480 221 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 PRR20BP86481 221 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 PRR20AP86496 221 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 MXD1Q05195 221 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 IDNKQ5T6J7 187 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 CMTM1Q8IZ96 169 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 CADM3Q8N126 398 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 OR5H6Q8NGV6 325 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 FCAMRQ8WWV6 532 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 SLC25A46Q96AG3 418 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 MISP3Q96FF7 219 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 TXN2Q99757 166 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 IFT46Q9NQC8 304 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 EHFQ9NZC4 300 aa11.3□□□□□ -0.6
RTN3-211ENST00000542238 IGLL5B9A064 214 aa11.29□□□□□ -0.6
RTN3-211ENST00000542238 C11orf94C9JXX5 98 aa11.29□□□□□ -0.6
RTN3-211ENST00000542238 DEFB4AO15263 64 aa11.29□□□□□ -0.6
RTN3-211ENST00000542238 GINS3Q9BRX5 216 aa11.29□□□□□ -0.6
RTN3-211ENST00000542238 ZNF2Q9BSG1 426 aaPredicted RBP11.29□□□□□ -0.6
RTN3-211ENST00000542238 NXF2Q9GZY0 626 aaKnown RBP11.29□□□□□ -0.6
RTN3-211ENST00000542238 PAIP2BQ9ULR5 123 aaKnown RBP11.29□□□□□ -0.6
RTN3-211ENST00000542238 IGHV3OR16-13A0A075B7E8 117 aa11.28□□□□□ -0.6
RTN3-211ENST00000542238 IGHV3-74A0A0B4J1X5 117 aa11.28□□□□□ -0.6
RTN3-211ENST00000542238 LOC100506127A0A0U1RQW1 187 aa11.28□□□□□ -0.6
RTN3-211ENST00000542238 MEIS3P1A6NDR6 274 aa11.28□□□□□ -0.6
RTN3-211ENST00000542238 DNASE2O00115 360 aaPredicted RBP11.28□□□□□ -0.6
RTN3-211ENST00000542238 GNG7O60262 68 aa11.28□□□□□ -0.6
RTN3-211ENST00000542238 ATP6V1G1O75348 118 aa11.28□□□□□ -0.6
RTN3-211ENST00000542238 FAM90A2PQ658T7 463 aa11.28□□□□□ -0.6
RTN3-211ENST00000542238 DHRS11Q6UWP2 260 aa11.28□□□□□ -0.6
RTN3-211ENST00000542238 TCF24Q7RTU0 167 aa11.28□□□□□ -0.6
RTN3-211ENST00000542238 MOB3AQ96BX8 217 aa11.28□□□□□ -0.6
RTN3-211ENST00000542238 C15orf61A6NNL5 157 aa11.27□□□□□ -0.61
RTN3-211ENST00000542238 I3L2K1 104 aa11.27□□□□□ -0.61
RTN3-211ENST00000542238 DFFBO76075 338 aa11.27□□□□□ -0.61
RTN3-211ENST00000542238 CLEC2LP0C7M8 214 aa11.27□□□□□ -0.61
RTN3-211ENST00000542238 RFX2P48378 723 aa11.27□□□□□ -0.61
RTN3-211ENST00000542238 PPP5CP53041 499 aa11.27□□□□□ -0.61
RTN3-211ENST00000542238 RPL11P62913 178 aaKnown RBP11.27□□□□□ -0.61
RTN3-211ENST00000542238 SLIRPQ9GZT3 109 aaKnown RBP11.27□□□□□ -0.61
RTN3-211ENST00000542238 TMEM14BQ9NUH8 114 aa11.27□□□□□ -0.61
RTN3-211ENST00000542238 CCDC59Q9P031 241 aaKnown RBP11.27□□□□□ -0.61
RTN3-211ENST00000542238 APLNQ9ULZ1 77 aa11.27□□□□□ -0.61
RTN3-211ENST00000542238 DNAH10Q8IVF4 4471 aa11.27□□□□□ -0.61
RTN3-211ENST00000542238 HECTD4Q9Y4D8 3996 aa11.26□□□□□ -0.61
RTN3-211ENST00000542238 PCLOQ9Y6V0 5065 aa11.26□□□□□ -0.61
RTN3-211ENST00000542238 GPR31O00270 319 aa11.26□□□□□ -0.61
RTN3-211ENST00000542238 ST8SIA3O43173 380 aa11.26□□□□□ -0.61
RTN3-211ENST00000542238 MT-CO2P00403 227 aa11.26□□□□□ -0.61
RTN3-211ENST00000542238 S100GP29377 79 aa11.26□□□□□ -0.61
RTN3-211ENST00000542238 DEFB131AP59861 70 aa11.26□□□□□ -0.61
RTN3-211ENST00000542238 VBP1P61758 197 aa11.26□□□□□ -0.61
RTN3-211ENST00000542238 LEMD1Q68G75 181 aa11.26□□□□□ -0.61
RTN3-211ENST00000542238 STHQ8IWL8 128 aa11.26□□□□□ -0.61
RTN3-211ENST00000542238 DUSP18Q8NEJ0 188 aa11.26□□□□□ -0.61
RTN3-211ENST00000542238 OR4A16Q8NH70 328 aa11.26□□□□□ -0.61
RTN3-211ENST00000542238 ZNF414Q96IQ9 312 aa11.26□□□□□ -0.61
RTN3-211ENST00000542238 MS4A6AQ9H2W1 248 aa11.26□□□□□ -0.61
RTN3-211ENST00000542238 HRH4Q9H3N8 390 aa11.26□□□□□ -0.61
RTN3-211ENST00000542238 XRCC3O43542 346 aa11.25□□□□□ -0.61
RTN3-211ENST00000542238 PMP2P02689 132 aa11.25□□□□□ -0.61
RTN3-211ENST00000542238 TAS2R46P59540 309 aa11.25□□□□□ -0.61
RTN3-211ENST00000542238 NCS1P62166 190 aa11.25□□□□□ -0.61
RTN3-211ENST00000542238 IFITM3Q01628 133 aa11.25□□□□□ -0.61
RTN3-211ENST00000542238 OR5H2Q8NGV7 314 aa11.25□□□□□ -0.61
RTN3-211ENST00000542238 OR6F1Q8NGZ6 308 aa11.25□□□□□ -0.61
RTN3-211ENST00000542238 ST8SIA2Q92186 375 aa11.25□□□□□ -0.61
RTN3-211ENST00000542238 PINX1Q96BK5 328 aaKnown RBP11.25□□□□□ -0.61
RTN3-211ENST00000542238 S100A16Q96FQ6 103 aaKnown RBP11.25□□□□□ -0.61
RTN3-211ENST00000542238 TRAV2A0A0B4J234 112 aa11.24□□□□□ -0.61
RTN3-211ENST00000542238 DBX1A6NMT0 343 aa11.24□□□□□ -0.61
RTN3-211ENST00000542238 IGHV3-48P01763 117 aa11.24□□□□□ -0.61
RTN3-211ENST00000542238 RPS19P39019 145 aaKnown RBP11.24□□□□□ -0.61
RTN3-211ENST00000542238 NPBWR1P48145 328 aa11.24□□□□□ -0.61
RTN3-211ENST00000542238 ERHP84090 104 aaKnown RBP11.24□□□□□ -0.61
RTN3-211ENST00000542238 TMEM41BQ5BJD5 291 aa11.24□□□□□ -0.61
RTN3-211ENST00000542238 TOMM20LQ6UXN7 152 aa11.24□□□□□ -0.61
RTN3-211ENST00000542238 LINC00336Q6ZUF6 198 aa11.24□□□□□ -0.61
RTN3-211ENST00000542238 H2BFWTQ7Z2G1 175 aa11.24□□□□□ -0.61
RTN3-211ENST00000542238 ZNF114Q8NC26 417 aa11.24□□□□□ -0.61
RTN3-211ENST00000542238 MCFD2Q8NI22 146 aa11.24□□□□□ -0.61
RTN3-211ENST00000542238 TMEM231Q9H6L2 316 aa11.24□□□□□ -0.61
RTN3-211ENST00000542238 RNF167Q9H6Y7 350 aa11.24□□□□□ -0.61
RTN3-211ENST00000542238 VSIRQ9H7M9 311 aa11.24□□□□□ -0.61
RTN3-211ENST00000542238 FAM212BQ9NTI7 297 aaPredicted RBP11.24□□□□□ -0.61
RTN3-211ENST00000542238 RABAC1Q9UI14 185 aa11.24□□□□□ -0.61
RTN3-211ENST00000542238 UPK1BO75841 260 aa11.23□□□□□ -0.61
RTN3-211ENST00000542238 PRCDQ00LT1 54 aa11.23□□□□□ -0.61
RTN3-211ENST00000542238 LPCAT3Q6P1A2 487 aa11.23□□□□□ -0.61
RTN3-211ENST00000542238 ZNF600Q6ZNG1 722 aa11.23□□□□□ -0.61
RTN3-211ENST00000542238 Q8NAQ8 132 aa11.23□□□□□ -0.61
RTN3-211ENST00000542238 AGRNO00468 2067 aa11.23□□□□□ -0.61
RTN3-211ENST00000542238 TRAV10A0A0B4J240 114 aa11.22□□□□□ -0.61
RTN3-211ENST00000542238 IGHV3-66A0A0C4DH42 116 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms