RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 FBXL7Q9UJT9 491 aa7.73□□□□□ -1.17
CNOT4-212ENST00000541284 SMIM27A0A1W2PRY6 76 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 SCGB1D1O95968 90 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 CD69Q07108 199 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 RPEL1Q2QD12 228 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 DEFB124Q8NES8 71 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 MBD6Q96DN6 1003 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 RCHY1Q96PM5 261 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 C20orf144Q9BQM9 153 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 ATG101Q9BSB4 218 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 OSTCQ9NRP0 149 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 YLPM1P49750 1951 aaKnown RBP7.72□□□□□ -1.17
CNOT4-212ENST00000541284 TRAV5A0A0B4J249 113 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 PATE2Q6UY27 113 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 MRPL20Q9BYC9 149 aaKnown RBP7.72□□□□□ -1.17
CNOT4-212ENST00000541284 FNDC4Q9H6D8 234 aaPredicted RBP7.72□□□□□ -1.17
CNOT4-212ENST00000541284 C7orf69Q9H7B7 122 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 PLEKHA3Q9HB20 300 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 MRPL36Q9P0J6 103 aaKnown RBP7.72□□□□□ -1.17
CNOT4-212ENST00000541284 K7EM74 188 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 TNFRSF13BO14836 293 aaPredicted RBP7.72□□□□□ -1.17
CNOT4-212ENST00000541284 CRISP2P16562 243 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 PPOXP50336 477 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 PAFAH1B2P68402 229 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 DEFB109BQ30KR1 87 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 FAM168AQ92567 244 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 TMEM167BQ9NRX6 74 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 SLC35D1Q9NTN3 355 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 PLCE1Q9P212 2302 aa7.72□□□□□ -1.17
CNOT4-212ENST00000541284 TRBV9A0A0B4J1U6 114 aa7.71□□□□□ -1.17
CNOT4-212ENST00000541284 HELTA6NFD8 242 aa7.71□□□□□ -1.17
CNOT4-212ENST00000541284 SNURFLB1AK76 121 aa7.71□□□□□ -1.17
CNOT4-212ENST00000541284 H0YJW9 148 aa7.71□□□□□ -1.17
CNOT4-212ENST00000541284 ISLRO14498 428 aa7.71□□□□□ -1.17
CNOT4-212ENST00000541284 IGLV2-23P01705 113 aa7.71□□□□□ -1.17
CNOT4-212ENST00000541284 TNFAIP6P98066 277 aaPredicted RBP7.71□□□□□ -1.17
CNOT4-212ENST00000541284 DIAPH2-AS1Q14236 149 aa7.71□□□□□ -1.17
CNOT4-212ENST00000541284 FXYD3Q14802 87 aa7.71□□□□□ -1.17
CNOT4-212ENST00000541284 DEFB108BQ8NET1 73 aa7.71□□□□□ -1.17
CNOT4-212ENST00000541284 OR5AN1Q8NGI8 311 aa7.71□□□□□ -1.17
CNOT4-212ENST00000541284 UHRF2Q96PU4 802 aa7.71□□□□□ -1.17
CNOT4-212ENST00000541284 TECRQ9NZ01 308 aaKnown RBP7.71□□□□□ -1.17
CNOT4-212ENST00000541284 A0A1W2PRE2 83 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 BMPR1BO00238 502 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 FCN1O00602 326 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 CEACAM8P31997 349 aaPredicted RBP7.71□□□□□ -1.18
CNOT4-212ENST00000541284 CTRLP40313 264 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 GNG4P50150 75 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 OR5B3Q8NH48 314 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 OR2T6Q8NHC8 308 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 RND1Q92730 232 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 ZNF714Q96N38 554 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 HSPB9Q9BQS6 159 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 HINT2Q9BX68 163 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 MT-CO2P00403 227 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 MYCNOSP40205 109 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 WT1-ASQ06250 92 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 RAB31Q13636 194 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 GDF5OSQ5U4N7 250 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 ALKBH2Q6NS38 261 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 ZNF841Q6ZN19 808 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 RBMXL3Q8N7X1 1067 aaKnown RBP7.71□□□□□ -1.18
CNOT4-212ENST00000541284 ZNF596Q8TC21 504 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 LINC00479Q96M42 142 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 ZNF835Q9Y2P0 537 aa7.71□□□□□ -1.18
CNOT4-212ENST00000541284 NAV3Q8IVL0 2385 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 GPX1P07203 203 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 TPPP2P59282 170 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 FAM27E3Q08E93 113 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 TMEM30BQ3MIR4 351 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 TMEM177Q53S58 311 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 LINC00312Q9Y6C7 94 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 A8MXE2 369 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 CD40P25942 277 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 ATP5IP56385 69 aaPredicted RBP7.7□□□□□ -1.18
CNOT4-212ENST00000541284 PVRIGQ6DKI7 326 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 ST6GALNAC6Q969X2 333 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 ENY2Q9NPA8 101 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 C8orf88P0DMB2 117 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 CCL3L1P16619 93 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 C1orf185Q5T7R7 199 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 NIT1Q86X76 327 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 C19orf24Q9BVV8 132 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 ARFGEF3Q5TH69 2177 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 ADGRG4Q8IZF6 3080 aa7.7□□□□□ -1.18
CNOT4-212ENST00000541284 A0A1W2PS18 150 aa7.69□□□□□ -1.18
CNOT4-212ENST00000541284 VWC2LB2RUY7 222 aa7.69□□□□□ -1.18
CNOT4-212ENST00000541284 TCAPO15273 167 aa7.69□□□□□ -1.18
CNOT4-212ENST00000541284 CHRNB4P30926 498 aa7.69□□□□□ -1.18
CNOT4-212ENST00000541284 DLX6P56179 175 aa7.69□□□□□ -1.18
CNOT4-212ENST00000541284 SUMO1P63165 101 aaKnown RBP7.69□□□□□ -1.18
CNOT4-212ENST00000541284 SLC35B1P78383 322 aa7.69□□□□□ -1.18
CNOT4-212ENST00000541284 C10orf55Q5SWW7 151 aa7.69□□□□□ -1.18
CNOT4-212ENST00000541284 NUP37Q8NFH4 326 aa7.69□□□□□ -1.18
CNOT4-212ENST00000541284 RAB9BQ9NP90 201 aa7.69□□□□□ -1.18
CNOT4-212ENST00000541284 CA1P00915 261 aaPredicted RBP7.69□□□□□ -1.18
CNOT4-212ENST00000541284 RANP62826 216 aaKnown RBP7.69□□□□□ -1.18
CNOT4-212ENST00000541284 KIAA1644Q3SXP7 199 aa7.69□□□□□ -1.18
CNOT4-212ENST00000541284 TOMM20LQ6UXN7 152 aa7.69□□□□□ -1.18
CNOT4-212ENST00000541284 ZNF329Q86UD4 541 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms