RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 ZNF681Q96N22 645 aa3.09□□□□□ -1.91
YBX3-210ENST00000540975 IP6K3Q96PC2 410 aa3.09□□□□□ -1.91
YBX3-210ENST00000540975 S100A13Q99584 98 aa3.09□□□□□ -1.91
YBX3-210ENST00000540975 FOXC2Q99958 501 aa3.09□□□□□ -1.91
YBX3-210ENST00000540975 MIEN1Q9BRT3 115 aa3.09□□□□□ -1.91
YBX3-210ENST00000540975 ANAPC13Q9BS18 74 aa3.09□□□□□ -1.91
YBX3-210ENST00000540975 ADAT1Q9BUB4 502 aaKnown RBP3.09□□□□□ -1.91
YBX3-210ENST00000540975 OR2D2Q9H210 308 aa3.09□□□□□ -1.91
YBX3-210ENST00000540975 HES4Q9HCC6 221 aa3.09□□□□□ -1.91
YBX3-210ENST00000540975 RBM22Q9NW64 420 aaKnown RBP eCLIP3.09□□□□□ -1.91
YBX3-210ENST00000540975 PRNDQ9UKY0 176 aa3.09□□□□□ -1.91
YBX3-210ENST00000540975 BTRCQ9Y297 605 aa3.09□□□□□ -1.91
YBX3-210ENST00000540975 NUP98P52948 1817 aa3.09□□□□□ -1.92
YBX3-210ENST00000540975 GPR179Q6PRD1 2367 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 BTAF1O14981 1849 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 IGHV5-51A0A0C4DH38 117 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 IGHV3-66A0A0C4DH42 116 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 A0A1B0GVX0 72 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 HMSDA8MTL9 139 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 MAS1P04201 325 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 CSRP1P21291 193 aaKnown RBP3.08□□□□□ -1.92
YBX3-210ENST00000540975 IMPA1P29218 277 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 BLVRBP30043 206 aaPredicted RBP3.08□□□□□ -1.92
YBX3-210ENST00000540975 GABRA3P34903 492 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 SSR4P51571 173 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 TAS2R20P59543 309 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 MEF2CQ06413 473 aaPredicted RBP3.08□□□□□ -1.92
YBX3-210ENST00000540975 BATFQ16520 125 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 SLC25A35Q3KQZ1 300 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 KHDC3LQ587J8 217 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 VAX1Q5SQQ9 334 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 FAM27D1Q5T7N8 215 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 BCL2L15Q5TBC7 163 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 FKBP1CQ5VVH2 108 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 GLT8D1Q68CQ7 371 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 EIF5AL1Q6IS14 154 aaKnown RBP3.08□□□□□ -1.92
YBX3-210ENST00000540975 DNAJC24Q6P3W2 148 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 GLIPR1L1Q6UWM5 242 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 ALKAL2Q6UX46 152 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 TMEM91Q6ZNR0 172 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 GTF2H5Q6ZYL4 71 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 VKORC1L1Q8N0U8 176 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 HIST3H2BBQ8N257 126 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 C5orf17Q8NAS9 161 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 OR51A2Q8NGJ7 313 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 FNDC9Q8TBE3 224 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 ZNF675Q8TD23 568 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 SLC25A46Q96AG3 418 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 YPEL4Q96NS1 127 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 AGMATQ9BSE5 352 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 GABARAPL3Q9BY60 117 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 OR8D2Q9GZM6 311 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 SH3BGRL3Q9H299 93 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 LINC00597Q9H2U6 94 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 FBXL15Q9H469 300 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 VSIRQ9H7M9 311 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 TUBA4BQ9H853 241 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 LYRM2Q9NU23 88 aaPredicted RBP3.08□□□□□ -1.92
YBX3-210ENST00000540975 PKIGQ9Y2B9 76 aa3.08□□□□□ -1.92
YBX3-210ENST00000540975 LSM2Q9Y333 95 aaKnown RBP3.08□□□□□ -1.92
YBX3-210ENST00000540975 DOCK1Q14185 1865 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 NUP214P35658 2090 aaPredicted RBP3.07□□□□□ -1.92
YBX3-210ENST00000540975 IGKV1D-13A0A0B4J2D9 117 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 A0A1B0GW64 132 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 ZNF705GA8MUZ8 300 aaPredicted RBP3.07□□□□□ -1.92
YBX3-210ENST00000540975 C9JAW5 83 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.07□□□□□ -1.92
YBX3-210ENST00000540975 ZNF593O00488 134 aaPredicted RBP3.07□□□□□ -1.92
YBX3-210ENST00000540975 EEDO75530 441 aaKnown RBP3.07□□□□□ -1.92
YBX3-210ENST00000540975 OR2A4O95047 310 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 YIF1AO95070 293 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 CDRT1O95170 752 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 SOX14O95416 240 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 AIFM1O95831 613 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 REG1AP05451 166 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 IGKV1-13P0DP09 117 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 GZMBP10144 247 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 ATP6V0CP27449 155 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 G6PCP35575 357 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 CXCL12P48061 93 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 CTBP2P56545 445 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 C1QTNF8P60827 252 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 UBA52P62987 128 aaKnown RBP3.07□□□□□ -1.92
YBX3-210ENST00000540975 RPS21P63220 83 aaKnown RBP3.07□□□□□ -1.92
YBX3-210ENST00000540975 MEF2BQ02080 365 aaPredicted RBP3.07□□□□□ -1.92
YBX3-210ENST00000540975 SLC25A11Q02978 314 aaKnown RBP3.07□□□□□ -1.92
YBX3-210ENST00000540975 GLYATL3Q5SZD4 288 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 TMEM244Q5VVB8 128 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 ZNF705AQ6ZN79 300 aaPredicted RBP3.07□□□□□ -1.92
YBX3-210ENST00000540975 NEGR1Q7Z3B1 354 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 GKN2Q86XP6 184 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 C1orf158Q8N1D5 194 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 PLPP5Q8NEB5 264 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 OR5A1Q8NGJ0 315 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 OR52E2Q8NGJ4 325 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 OR2T35Q8NGX2 323 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 MBD3L1Q8WWY6 194 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 GEMIN6Q8WXD5 167 aaKnown RBP3.07□□□□□ -1.92
YBX3-210ENST00000540975 RMI2Q96E14 147 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 ZMYND19Q96E35 227 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms