RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 IAH1Q2TAA2 248 aaPredicted RBP11.96□□□□□ -0.49
DDB1-218ENST00000540784 NOXA1Q86UR1 476 aa11.96□□□□□ -0.49
DDB1-218ENST00000540784 WFDC9Q8NEX5 89 aa11.96□□□□□ -0.49
DDB1-218ENST00000540784 DTD1Q8TEA8 209 aa11.96□□□□□ -0.49
DDB1-218ENST00000540784 OR10C1Q96KK4 312 aa11.96□□□□□ -0.49
DDB1-218ENST00000540784 S4R3C0 116 aa11.96□□□□□ -0.49
DDB1-218ENST00000540784 CLEC3BP05452 202 aa11.95□□□□□ -0.5
DDB1-218ENST00000540784 ID3Q02535 119 aa11.95□□□□□ -0.5
DDB1-218ENST00000540784 FHL3Q13643 280 aa11.95□□□□□ -0.5
DDB1-218ENST00000540784 CLEC19AQ6UXS0 136 aa11.95□□□□□ -0.5
DDB1-218ENST00000540784 LINC00482Q8N8I6 264 aa11.95□□□□□ -0.5
DDB1-218ENST00000540784 SCARB1Q8WTV0 552 aa11.95□□□□□ -0.5
DDB1-218ENST00000540784 PINX1Q96BK5 328 aaKnown RBP11.95□□□□□ -0.5
DDB1-218ENST00000540784 MAGT1Q9H0U3 335 aa11.95□□□□□ -0.5
DDB1-218ENST00000540784 U3KQ87 197 aa11.95□□□□□ -0.5
DDB1-218ENST00000540784 IGHV3-21A0A0B4J1V1 117 aa11.94□□□□□ -0.5
DDB1-218ENST00000540784 MFSD2BA6NFX1 497 aa11.94□□□□□ -0.5
DDB1-218ENST00000540784 CORTO00230 105 aa11.94□□□□□ -0.5
DDB1-218ENST00000540784 CCSO14618 274 aa11.94□□□□□ -0.5
DDB1-218ENST00000540784 SYNGR2O43760 224 aa11.94□□□□□ -0.5
DDB1-218ENST00000540784 IFNA10P01566 189 aa11.94□□□□□ -0.5
DDB1-218ENST00000540784 TRBV12-3P01733 135 aa11.94□□□□□ -0.5
DDB1-218ENST00000540784 ZP3P21754 424 aa11.94□□□□□ -0.5
DDB1-218ENST00000540784 NKX2-1P43699 371 aaPredicted RBP11.94□□□□□ -0.5
DDB1-218ENST00000540784 ATP5IP56385 69 aaPredicted RBP11.94□□□□□ -0.5
DDB1-218ENST00000540784 BSXQ3C1V8 233 aa11.94□□□□□ -0.5
DDB1-218ENST00000540784 C2orf83Q53S99 150 aa11.94□□□□□ -0.5
DDB1-218ENST00000540784 PVRIGQ6DKI7 326 aa11.94□□□□□ -0.5
DDB1-218ENST00000540784 GSG1LQ6UXU4 331 aa11.94□□□□□ -0.5
DDB1-218ENST00000540784 ZBTB8BQ8NAP8 495 aaPredicted RBP11.94□□□□□ -0.5
DDB1-218ENST00000540784 SLC24A4Q8NFF2 622 aa11.94□□□□□ -0.5
DDB1-218ENST00000540784 OR4D5Q8NGN0 318 aa11.94□□□□□ -0.5
DDB1-218ENST00000540784 I3L2K1 104 aa11.93□□□□□ -0.5
DDB1-218ENST00000540784 K7EIM0 57 aa11.93□□□□□ -0.5
DDB1-218ENST00000540784 WRBO00258 174 aa11.93□□□□□ -0.5
DDB1-218ENST00000540784 LY86O95711 162 aa11.93□□□□□ -0.5
DDB1-218ENST00000540784 MT-CO2P00403 227 aa11.93□□□□□ -0.5
DDB1-218ENST00000540784 SLURP1P55000 103 aa11.93□□□□□ -0.5
DDB1-218ENST00000540784 MFAP4P55083 255 aa11.93□□□□□ -0.5
DDB1-218ENST00000540784 TATDN3Q17R31 274 aa11.93□□□□□ -0.5
DDB1-218ENST00000540784 ZNF502Q8TBZ5 544 aa11.93□□□□□ -0.5
DDB1-218ENST00000540784 DCUN1D4Q92564 292 aa11.93□□□□□ -0.5
DDB1-218ENST00000540784 C2orf50Q96LR7 162 aa11.93□□□□□ -0.5
DDB1-218ENST00000540784 CIB3Q96Q77 187 aaPredicted RBP11.93□□□□□ -0.5
DDB1-218ENST00000540784 C21orf62Q9NYP8 219 aa11.93□□□□□ -0.5
DDB1-218ENST00000540784 PPP5D1E7EU14 171 aa11.92□□□□□ -0.5
DDB1-218ENST00000540784 SSNA1O43805 119 aa11.92□□□□□ -0.5
DDB1-218ENST00000540784 GGCTO75223 188 aaKnown RBP11.92□□□□□ -0.5
DDB1-218ENST00000540784 SCGB1D2O95969 90 aa11.92□□□□□ -0.5
DDB1-218ENST00000540784 IAPPP10997 89 aa11.92□□□□□ -0.5
DDB1-218ENST00000540784 NPY1RP25929 384 aa11.92□□□□□ -0.5
DDB1-218ENST00000540784 HOXD3P31249 432 aaPredicted RBP11.92□□□□□ -0.5
DDB1-218ENST00000540784 POLR2GP62487 172 aaKnown RBP eCLIP11.92□□□□□ -0.5
DDB1-218ENST00000540784 RPP30P78346 268 aaKnown RBP11.92□□□□□ -0.5
DDB1-218ENST00000540784 RPEL1Q2QD12 228 aa11.92□□□□□ -0.5
DDB1-218ENST00000540784 C11orf87Q6NUJ2 197 aa11.92□□□□□ -0.5
DDB1-218ENST00000540784 RNASEH2CQ8TDP1 164 aaKnown RBP11.92□□□□□ -0.5
DDB1-218ENST00000540784 DLX4Q92988 240 aaPredicted RBP11.92□□□□□ -0.5
DDB1-218ENST00000540784 CCDC140Q96MF4 163 aa11.92□□□□□ -0.5
DDB1-218ENST00000540784 TXN2Q99757 166 aa11.92□□□□□ -0.5
DDB1-218ENST00000540784 GAR1Q9NY12 217 aaKnown RBP11.92□□□□□ -0.5
DDB1-218ENST00000540784 TRRAPQ9Y4A5 3859 aa11.92□□□□□ -0.5
DDB1-218ENST00000540784 BMPR1BO00238 502 aa11.91□□□□□ -0.5
DDB1-218ENST00000540784 IGHV3-48P01763 117 aa11.91□□□□□ -0.5
DDB1-218ENST00000540784 IFNA4P05014 189 aa11.91□□□□□ -0.5
DDB1-218ENST00000540784 ARL3P36405 182 aa11.91□□□□□ -0.5
DDB1-218ENST00000540784 KLF5Q13887 457 aaPredicted RBP11.91□□□□□ -0.5
DDB1-218ENST00000540784 MLANAQ16655 118 aa11.91□□□□□ -0.5
DDB1-218ENST00000540784 Q56UQ5 140 aa11.91□□□□□ -0.5
DDB1-218ENST00000540784 UBAC2Q8NBM4 344 aa11.91□□□□□ -0.5
DDB1-218ENST00000540784 ATP6V0BQ99437 205 aa11.91□□□□□ -0.5
DDB1-218ENST00000540784 MCRIP2Q9BUT9 160 aaKnown RBP11.91□□□□□ -0.5
DDB1-218ENST00000540784 RPS10-NUDT3A0A1W2PQS6 291 aa11.9□□□□□ -0.5
DDB1-218ENST00000540784 C7orf66A4D0T2 115 aa11.9□□□□□ -0.5
DDB1-218ENST00000540784 GOSR2O14653 212 aa11.9□□□□□ -0.5
DDB1-218ENST00000540784 OVOL1O14753 267 aa11.9□□□□□ -0.5
DDB1-218ENST00000540784 OR2C1O95371 312 aa11.9□□□□□ -0.5
DDB1-218ENST00000540784 MBPP02686 304 aaPredicted RBP11.9□□□□□ -0.5
DDB1-218ENST00000540784 GPR183P32249 361 aa11.9□□□□□ -0.5
DDB1-218ENST00000540784 OPRK1P41145 380 aa11.9□□□□□ -0.5
DDB1-218ENST00000540784 RAB11AP62491 216 aa11.9□□□□□ -0.5
DDB1-218ENST00000540784 ACSM6Q6P461 480 aa11.9□□□□□ -0.5
DDB1-218ENST00000540784 TMEM170AQ8WVE7 144 aa11.9□□□□□ -0.5
DDB1-218ENST00000540784 RCC1LQ96I51 464 aaKnown RBP11.9□□□□□ -0.5
DDB1-218ENST00000540784 SMIM8Q96KF7 97 aa11.9□□□□□ -0.5
DDB1-218ENST00000540784 ZC4H2Q9NQZ6 224 aa11.9□□□□□ -0.5
DDB1-218ENST00000540784 PAIP2BQ9ULR5 123 aaKnown RBP11.9□□□□□ -0.5
DDB1-218ENST00000540784 ALG5Q9Y673 324 aa11.9□□□□□ -0.5
DDB1-218ENST00000540784 VWFP04275 2813 aa11.9□□□□□ -0.5
DDB1-218ENST00000540784 OR2T8A6NH00 312 aa11.89□□□□□ -0.51
DDB1-218ENST00000540784 SSSCA1O60232 199 aa11.89□□□□□ -0.51
DDB1-218ENST00000540784 SIX6O95475 246 aa11.89□□□□□ -0.51
DDB1-218ENST00000540784 IGLL1P15814 213 aa11.89□□□□□ -0.51
DDB1-218ENST00000540784 NPBWR1P48145 328 aa11.89□□□□□ -0.51
DDB1-218ENST00000540784 SYNJ2BPP57105 145 aa11.89□□□□□ -0.51
DDB1-218ENST00000540784 OXA1LQ15070 435 aa11.89□□□□□ -0.51
DDB1-218ENST00000540784 FAM106AQ4KMX7 169 aa11.89□□□□□ -0.51
DDB1-218ENST00000540784 SPANXN5Q5MJ07 72 aa11.89□□□□□ -0.51
DDB1-218ENST00000540784 ETFRF1Q6IPR1 90 aa11.89□□□□□ -0.51
DDB1-218ENST00000540784 SPSB3Q6PJ21 355 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms