RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 FAM106AQ4KMX7 169 aa11.24□□□□□ -0.61
LRRK1-211ENST00000538064 OR10W1Q8NGF6 305 aa11.24□□□□□ -0.61
LRRK1-211ENST00000538064 GLYATL2Q8WU03 294 aa11.24□□□□□ -0.61
LRRK1-211ENST00000538064 RBPMSQ93062 196 aaKnown RBP11.24□□□□□ -0.61
LRRK1-211ENST00000538064 LSM10Q969L4 123 aaKnown RBP11.24□□□□□ -0.61
LRRK1-211ENST00000538064 TMEM230Q96A57 120 aa11.24□□□□□ -0.61
LRRK1-211ENST00000538064 GALNT14Q96FL9 552 aa11.24□□□□□ -0.61
LRRK1-211ENST00000538064 TMEM56Q96MV1 263 aa11.24□□□□□ -0.61
LRRK1-211ENST00000538064 CD7P09564 240 aa11.23□□□□□ -0.61
LRRK1-211ENST00000538064 OR13C7P0DN81 318 aa11.23□□□□□ -0.61
LRRK1-211ENST00000538064 LYL1P12980 280 aa11.23□□□□□ -0.61
LRRK1-211ENST00000538064 SRPXP78539 464 aa11.23□□□□□ -0.61
LRRK1-211ENST00000538064 TMEM128Q5BJH2 165 aa11.23□□□□□ -0.61
LRRK1-211ENST00000538064 LINC00322Q6ZN03 302 aaPredicted RBP11.23□□□□□ -0.61
LRRK1-211ENST00000538064 FAM219AQ8IW50 185 aa11.23□□□□□ -0.61
LRRK1-211ENST00000538064 CENPSQ8N2Z9 138 aa11.23□□□□□ -0.61
LRRK1-211ENST00000538064 VN1R17PQ8TDU5 208 aa11.23□□□□□ -0.61
LRRK1-211ENST00000538064 IL22RA2Q969J5 263 aa11.23□□□□□ -0.61
LRRK1-211ENST00000538064 WDR89Q96FK6 387 aaPredicted RBP11.23□□□□□ -0.61
LRRK1-211ENST00000538064 PDCD10Q9BUL8 212 aa11.23□□□□□ -0.61
LRRK1-211ENST00000538064 HINT2Q9BX68 163 aa11.23□□□□□ -0.61
LRRK1-211ENST00000538064 NDUFA4L2Q9NRX3 87 aa11.23□□□□□ -0.61
LRRK1-211ENST00000538064 TMEM14BQ9NUH8 114 aa11.23□□□□□ -0.61
LRRK1-211ENST00000538064 TMEM56-RWDD3S4R434 201 aa11.23□□□□□ -0.61
LRRK1-211ENST00000538064 ZNF320A2RRD8 509 aa11.22□□□□□ -0.61
LRRK1-211ENST00000538064 NDUFB6O95139 128 aa11.22□□□□□ -0.61
LRRK1-211ENST00000538064 IGKV1-5P01602 117 aa11.22□□□□□ -0.61
LRRK1-211ENST00000538064 CLEC3BP05452 202 aa11.22□□□□□ -0.61
LRRK1-211ENST00000538064 CCR6P51684 374 aa11.22□□□□□ -0.61
LRRK1-211ENST00000538064 GUCA2BQ16661 112 aa11.22□□□□□ -0.61
LRRK1-211ENST00000538064 TMEM268Q5VZI3 342 aa11.22□□□□□ -0.61
LRRK1-211ENST00000538064 UNQ9165/PRO28630Q6UXU0 137 aa11.22□□□□□ -0.61
LRRK1-211ENST00000538064 SELENOHQ8IZQ5 122 aaKnown RBP11.22□□□□□ -0.61
LRRK1-211ENST00000538064 TMEM61Q8N0U2 210 aa11.22□□□□□ -0.61
LRRK1-211ENST00000538064 LGI3Q8N145 548 aa11.22□□□□□ -0.61
LRRK1-211ENST00000538064 MARC2Q969Z3 335 aa11.22□□□□□ -0.61
LRRK1-211ENST00000538064 ZNF436Q9C0F3 470 aaPredicted RBP11.22□□□□□ -0.61
LRRK1-211ENST00000538064 PALMDQ9NP74 551 aa11.22□□□□□ -0.61
LRRK1-211ENST00000538064 MLXQ9UH92 298 aa11.22□□□□□ -0.61
LRRK1-211ENST00000538064 F11RQ9Y624 299 aaKnown RBP11.22□□□□□ -0.61
LRRK1-211ENST00000538064 LYRM1O43325 122 aa11.21□□□□□ -0.61
LRRK1-211ENST00000538064 TGOLN2O43493 480 aa11.21□□□□□ -0.61
LRRK1-211ENST00000538064 VAMP1P23763 118 aa11.21□□□□□ -0.61
LRRK1-211ENST00000538064 ELLP55199 621 aaPredicted RBP11.21□□□□□ -0.61
LRRK1-211ENST00000538064 UBE2MP61081 183 aaKnown RBP11.21□□□□□ -0.61
LRRK1-211ENST00000538064 HSPE1P61604 102 aaKnown RBP11.21□□□□□ -0.61
LRRK1-211ENST00000538064 TMEM187Q14656 261 aa11.21□□□□□ -0.61
LRRK1-211ENST00000538064 PLET1Q6UQ28 207 aa11.21□□□□□ -0.61
LRRK1-211ENST00000538064 DEFB125Q8N687 156 aa11.21□□□□□ -0.61
LRRK1-211ENST00000538064 UXS1Q8NBZ7 420 aa11.21□□□□□ -0.61
LRRK1-211ENST00000538064 TMEM190Q8WZ59 177 aa11.21□□□□□ -0.61
LRRK1-211ENST00000538064 ATP6V0BQ99437 205 aa11.21□□□□□ -0.61
LRRK1-211ENST00000538064 WFDC10AQ9H1F0 79 aa11.21□□□□□ -0.61
LRRK1-211ENST00000538064 SRD5A3Q9H8P0 318 aa11.21□□□□□ -0.61
LRRK1-211ENST00000538064 UFC1Q9Y3C8 167 aa11.21□□□□□ -0.61
LRRK1-211ENST00000538064 IFNA17P01571 189 aa11.2□□□□□ -0.62
LRRK1-211ENST00000538064 P0C879 139 aa11.2□□□□□ -0.62
LRRK1-211ENST00000538064 C8orf88P0DMB2 117 aa11.2□□□□□ -0.62
LRRK1-211ENST00000538064 MFAP2P55001 183 aa11.2□□□□□ -0.62
LRRK1-211ENST00000538064 SUPT4H1P63272 117 aaKnown RBP11.2□□□□□ -0.62
LRRK1-211ENST00000538064 PRCDQ00LT1 54 aa11.2□□□□□ -0.62
LRRK1-211ENST00000538064 TM4SF20Q53R12 229 aa11.2□□□□□ -0.62
LRRK1-211ENST00000538064 BTNL8Q6UX41 500 aa11.2□□□□□ -0.62
LRRK1-211ENST00000538064 SLC16A13Q7RTY0 426 aa11.2□□□□□ -0.62
LRRK1-211ENST00000538064 OR1L6Q8NGR2 347 aa11.2□□□□□ -0.62
LRRK1-211ENST00000538064 LHFPL5Q8TAF8 219 aa11.2□□□□□ -0.62
LRRK1-211ENST00000538064 BSCL2Q96G97 398 aaPredicted RBP11.2□□□□□ -0.62
LRRK1-211ENST00000538064 CACFD1Q9UGQ2 172 aa11.2□□□□□ -0.62
LRRK1-211ENST00000538064 DNAH1Q9P2D7 4330 aa11.19□□□□□ -0.62
LRRK1-211ENST00000538064 A0A0B4J293 547 aa11.19□□□□□ -0.62
LRRK1-211ENST00000538064 A0A0B4J2A0 478 aa11.19□□□□□ -0.62
LRRK1-211ENST00000538064 RBMY1BA6NDE4 496 aaKnown RBP11.19□□□□□ -0.62
LRRK1-211ENST00000538064 RBMY1EA6NEQ0 496 aaKnown RBP11.19□□□□□ -0.62
LRRK1-211ENST00000538064 DBX1A6NMT0 343 aa11.19□□□□□ -0.62
LRRK1-211ENST00000538064 OR11H12B2RN74 326 aa11.19□□□□□ -0.62
LRRK1-211ENST00000538064 PLA2G10O15496 165 aa11.19□□□□□ -0.62
LRRK1-211ENST00000538064 SFT2D2O95562 160 aa11.19□□□□□ -0.62
LRRK1-211ENST00000538064 RBMY1DP0C7P1 496 aaKnown RBP11.19□□□□□ -0.62
LRRK1-211ENST00000538064 ERHP84090 104 aaKnown RBP11.19□□□□□ -0.62
LRRK1-211ENST00000538064 IZUMO4Q1ZYL8 232 aa11.19□□□□□ -0.62
LRRK1-211ENST00000538064 SLC25A24Q6NUK1 477 aa11.19□□□□□ -0.62
LRRK1-211ENST00000538064 MZT2BQ6NZ67 158 aa11.19□□□□□ -0.62
LRRK1-211ENST00000538064 SLC35G3Q8N808 338 aa11.19□□□□□ -0.62
LRRK1-211ENST00000538064 HIPK2Q9H2X6 1198 aa11.19□□□□□ -0.62
LRRK1-211ENST00000538064 RETNQ9HD89 108 aa11.19□□□□□ -0.62
LRRK1-211ENST00000538064 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.19□□□□□ -0.62
LRRK1-211ENST00000538064 C21orf62Q9NYP8 219 aa11.19□□□□□ -0.62
LRRK1-211ENST00000538064 MRPL27Q9P0M9 148 aaKnown RBP11.19□□□□□ -0.62
LRRK1-211ENST00000538064 SHPKQ9UHJ6 478 aa11.19□□□□□ -0.62
LRRK1-211ENST00000538064 SELENOKQ9Y6D0 94 aa11.19□□□□□ -0.62
LRRK1-211ENST00000538064 TRAV25A0A0B4J276 109 aa11.18□□□□□ -0.62
LRRK1-211ENST00000538064 A0A0G2JRQ6 117 aa11.18□□□□□ -0.62
LRRK1-211ENST00000538064 DUXBA0A1W2PPF3 345 aa11.18□□□□□ -0.62
LRRK1-211ENST00000538064 OR2T8A6NH00 312 aa11.18□□□□□ -0.62
LRRK1-211ENST00000538064 K7EIM0 57 aa11.18□□□□□ -0.62
LRRK1-211ENST00000538064 ST8SIA3O43173 380 aa11.18□□□□□ -0.62
LRRK1-211ENST00000538064 BTCP35070 178 aa11.18□□□□□ -0.62
LRRK1-211ENST00000538064 PPP1R1AQ13522 171 aa11.18□□□□□ -0.62
LRRK1-211ENST00000538064 SPSB3Q6PJ21 355 aa11.18□□□□□ -0.62
LRRK1-211ENST00000538064 OR52B4Q8NGK2 314 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms