RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 BEND2Q8NDZ0 799 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 MRPL32Q9BYC8 188 aaKnown RBP13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 Q9UFV3 132 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 PPIAL4AQ9Y536 164 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 ZNF292O60281 2723 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 TMEM178BH3BS89 294 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 KLK10O43240 276 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 NUPR1O60356 82 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 CCL3L1P16619 93 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 CBLN1P23435 193 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 OR5I1Q13606 314 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 TIGITQ495A1 244 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 WFDC8Q8IUA0 241 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 ZCCHC24Q8N2G6 241 aaKnown RBP13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 TMEM167AQ8TBQ9 72 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 TMEM186Q96B77 213 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 MRPL18Q9H0U6 180 aaKnown RBP13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 SAP30LQ9HAJ7 183 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 ROS1P08922 2347 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 CHRNB4P30926 498 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 SUMO1P63165 101 aaKnown RBP13□□□□□ -0.33
CHMP1A-202ENST00000535997 PAFAH1B2P68402 229 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 PDPNQ86YL7 162 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 LINC00311Q8N616 119 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 ZNF596Q8TC21 504 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 MS4A10Q96PG2 267 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 DNAJC4Q9NNZ3 241 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 OSTCQ9NRP0 149 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 VSTM5A8MXK1 200 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 GGTLC3B5MD39 225 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 ESDP10768 282 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 CRISP2P16562 243 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 RAB4BP61018 213 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 BSPH1Q075Z2 132 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 OR1L6Q8NGR2 347 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 OR10X1Q8NGY0 326 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 NDUFAF3Q9BU61 184 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 GNB1LQ9BYB4 327 aa13□□□□□ -0.33
CHMP1A-202ENST00000535997 A0A1B0GUS0 222 aa12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 PSMB11A5LHX3 300 aa12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 FCN1O00602 326 aa12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 ISLRO14498 428 aa12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 TNFRSF13BO14836 293 aaPredicted RBP12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 NDUFB3O43676 98 aa12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 FCN3O75636 299 aa12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 SCGB1D1O95968 90 aa12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 SUB1P53999 127 aaKnown RBP eCLIP12.99□□□□□ -0.333e-8■■□□□ 12.4
CHMP1A-202ENST00000535997 ASCL5Q7RTU5 278 aa12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 OR2T6Q8NHC8 308 aa12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 CMTM2Q8TAZ6 248 aa12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 SMG1Q96Q15 3661 aaKnown RBP12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 ZGRF1Q86YA3 2104 aa12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 E7EUB6 86 aa12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 PPOXP50336 477 aa12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 LRRC10Q5BKY1 277 aa12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 CCL17Q92583 94 aa12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 FAM167A-AS1Q96KT0 104 aa12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 WFIKKN1Q96NZ8 548 aa12.99□□□□□ -0.33
CHMP1A-202ENST00000535997 GRIFINA4D1Z8 144 aa12.98□□□□□ -0.33
CHMP1A-202ENST00000535997 THBDP07204 575 aa12.98□□□□□ -0.33
CHMP1A-202ENST00000535997 IER3P46695 156 aa12.98□□□□□ -0.33
CHMP1A-202ENST00000535997 REG1BP48304 166 aa12.98□□□□□ -0.33
CHMP1A-202ENST00000535997 CX3CL1P78423 397 aa12.98□□□□□ -0.33
CHMP1A-202ENST00000535997 Q0VG73 95 aa12.98□□□□□ -0.33
CHMP1A-202ENST00000535997 OR8I2Q8N0Y5 310 aa12.98□□□□□ -0.33
CHMP1A-202ENST00000535997 ST6GALNAC6Q969X2 333 aa12.98□□□□□ -0.33
CHMP1A-202ENST00000535997 RIF1Q5UIP0 2472 aaKnown RBP12.98□□□□□ -0.33
CHMP1A-202ENST00000535997 RANP62826 216 aaKnown RBP12.97□□□□□ -0.33
CHMP1A-202ENST00000535997 WT1-ASQ06250 92 aa12.97□□□□□ -0.33
CHMP1A-202ENST00000535997 COX19Q49B96 90 aa12.97□□□□□ -0.33
CHMP1A-202ENST00000535997 TMEM106BQ9NUM4 274 aa12.97□□□□□ -0.33
CHMP1A-202ENST00000535997 JKAMPQ9P055 326 aa12.97□□□□□ -0.33
CHMP1A-202ENST00000535997 TP53TG3Q9ULZ0 132 aa12.97□□□□□ -0.33
CHMP1A-202ENST00000535997 SNURFLB1AK76 121 aa12.97□□□□□ -0.33
CHMP1A-202ENST00000535997 MT-ND6P03923 174 aa12.97□□□□□ -0.33
CHMP1A-202ENST00000535997 TPPP2P59282 170 aa12.97□□□□□ -0.33
CHMP1A-202ENST00000535997 WDR73Q6P4I2 378 aa12.97□□□□□ -0.33
CHMP1A-202ENST00000535997 H1FXQ92522 213 aaKnown RBP12.97□□□□□ -0.33
CHMP1A-202ENST00000535997 SLC25A2Q9BXI2 301 aa12.97□□□□□ -0.33
CHMP1A-202ENST00000535997 NAGKQ9UJ70 344 aa12.97□□□□□ -0.33
CHMP1A-202ENST00000535997 WASHC3Q9Y3C0 194 aa12.97□□□□□ -0.33
CHMP1A-202ENST00000535997 IGLV2-8P01709 118 aa12.96□□□□□ -0.33
CHMP1A-202ENST00000535997 MC5RP33032 325 aa12.96□□□□□ -0.33
CHMP1A-202ENST00000535997 TDGF1P3P51864 188 aa12.96□□□□□ -0.33
CHMP1A-202ENST00000535997 ZNF137PP52743 207 aa12.96□□□□□ -0.33
CHMP1A-202ENST00000535997 TAS2R60P59551 318 aa12.96□□□□□ -0.33
CHMP1A-202ENST00000535997 OR1L4Q8NGR5 311 aa12.96□□□□□ -0.33
CHMP1A-202ENST00000535997 C2orf88Q9BSF0 95 aa12.96□□□□□ -0.33
CHMP1A-202ENST00000535997 RNASE7Q9H1E1 156 aaKnown RBP12.96□□□□□ -0.33
CHMP1A-202ENST00000535997 CGB1A6NKQ9 187 aa12.96□□□□□ -0.34
CHMP1A-202ENST00000535997 IGLV2-23P01705 113 aa12.96□□□□□ -0.34
CHMP1A-202ENST00000535997 C1orf194Q5T5A4 169 aa12.96□□□□□ -0.34
CHMP1A-202ENST00000535997 LYPD2Q6UXB3 125 aa12.96□□□□□ -0.34
CHMP1A-202ENST00000535997 ST6GALNAC3Q8NDV1 305 aa12.96□□□□□ -0.34
CHMP1A-202ENST00000535997 IGF2BP2-AS1Q96M15 143 aa12.96□□□□□ -0.34
CHMP1A-202ENST00000535997 PCNX1Q96RV3 2341 aa12.96□□□□□ -0.34
CHMP1A-202ENST00000535997 ZNF430Q9H8G1 570 aaPredicted RBP12.96□□□□□ -0.34
CHMP1A-202ENST00000535997 KAAG1Q9UBP8 84 aa12.96□□□□□ -0.34
CHMP1A-202ENST00000535997 CDC42EP3Q9UKI2 254 aa12.96□□□□□ -0.34
CHMP1A-202ENST00000535997 UBE2L3P68036 154 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms