RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 COMMD5Q9GZQ3 224 aa10.71□□□□□ -0.69
LDLR-203ENST00000535915 TRAPPC1Q9Y5R8 145 aa10.71□□□□□ -0.69
LDLR-203ENST00000535915 CHRNB4P30926 498 aa10.71□□□□□ -0.7
LDLR-203ENST00000535915 MLANAQ16655 118 aa10.71□□□□□ -0.7
LDLR-203ENST00000535915 TEX38Q6PEX7 206 aa10.71□□□□□ -0.7
LDLR-203ENST00000535915 GFRALQ6UXV0 394 aa10.71□□□□□ -0.7
LDLR-203ENST00000535915 OR10G8Q8NGN5 311 aa10.71□□□□□ -0.7
LDLR-203ENST00000535915 TMEM178BH3BS89 294 aa10.7□□□□□ -0.7
LDLR-203ENST00000535915 FCN3O75636 299 aa10.7□□□□□ -0.7
LDLR-203ENST00000535915 RNASE2P10153 161 aaKnown RBP10.7□□□□□ -0.7
LDLR-203ENST00000535915 OR10J1P30954 320 aa10.7□□□□□ -0.7
LDLR-203ENST00000535915 PRSS33Q8NF86 280 aa10.7□□□□□ -0.7
LDLR-203ENST00000535915 POLEQ07864 2286 aa10.7□□□□□ -0.7
LDLR-203ENST00000535915 H0YJW9 148 aa10.7□□□□□ -0.7
LDLR-203ENST00000535915 PDLIM4P50479 330 aa10.7□□□□□ -0.7
LDLR-203ENST00000535915 CNN1P51911 297 aaKnown RBP10.7□□□□□ -0.7
LDLR-203ENST00000535915 ERVFC1-1P60608 527 aa10.7□□□□□ -0.7
LDLR-203ENST00000535915 RPL15P61313 204 aaKnown RBP10.7□□□□□ -0.7
LDLR-203ENST00000535915 OR1L8Q8NGR8 309 aa10.7□□□□□ -0.7
LDLR-203ENST00000535915 OR10X1Q8NGY0 326 aa10.7□□□□□ -0.7
LDLR-203ENST00000535915 NAV3Q8IVL0 2385 aa10.7□□□□□ -0.7
LDLR-203ENST00000535915 A6NNC1 897 aa10.69□□□□□ -0.7
LDLR-203ENST00000535915 NDUFB3O43676 98 aa10.69□□□□□ -0.7
LDLR-203ENST00000535915 OR7C2O60412 319 aa10.69□□□□□ -0.7
LDLR-203ENST00000535915 RPLP1P05386 114 aaKnown RBP10.69□□□□□ -0.7
LDLR-203ENST00000535915 ATP5IP56385 69 aaPredicted RBP10.69□□□□□ -0.7
LDLR-203ENST00000535915 RPL8P62917 257 aaKnown RBP10.69□□□□□ -0.7
LDLR-203ENST00000535915 LYPD2Q6UXB3 125 aa10.69□□□□□ -0.7
LDLR-203ENST00000535915 FLYWCH2Q96CP2 140 aaKnown RBP10.69□□□□□ -0.7
LDLR-203ENST00000535915 SLC35E1Q96K37 410 aa10.69□□□□□ -0.7
LDLR-203ENST00000535915 TMEM167BQ9NRX6 74 aa10.69□□□□□ -0.7
LDLR-203ENST00000535915 APC2O95996 2303 aa10.69□□□□□ -0.7
LDLR-203ENST00000535915 DCHS1Q96JQ0 3298 aa10.69□□□□□ -0.7
LDLR-203ENST00000535915 K7EN84 100 aa10.69□□□□□ -0.7
LDLR-203ENST00000535915 IQCJQ1A5X6 159 aa10.69□□□□□ -0.7
LDLR-203ENST00000535915 MRPL41Q8IXM3 137 aaKnown RBP10.69□□□□□ -0.7
LDLR-203ENST00000535915 OR5AN1Q8NGI8 311 aa10.69□□□□□ -0.7
LDLR-203ENST00000535915 OR9G1Q8NH87 305 aa10.69□□□□□ -0.7
LDLR-203ENST00000535915 C11orf52Q96A22 123 aa10.69□□□□□ -0.7
LDLR-203ENST00000535915 CHODLQ9H9P2 273 aa10.69□□□□□ -0.7
LDLR-203ENST00000535915 TECRQ9NZ01 308 aaKnown RBP10.69□□□□□ -0.7
LDLR-203ENST00000535915 LINC00614P0C842 121 aa10.68□□□□□ -0.7
LDLR-203ENST00000535915 ERHP84090 104 aaKnown RBP10.68□□□□□ -0.7
LDLR-203ENST00000535915 CD69Q07108 199 aa10.68□□□□□ -0.7
LDLR-203ENST00000535915 COTL1Q14019 142 aa10.68□□□□□ -0.7
LDLR-203ENST00000535915 LRRC10Q5BKY1 277 aa10.68□□□□□ -0.7
LDLR-203ENST00000535915 DMRTA1Q5VZB9 504 aa10.68□□□□□ -0.7
LDLR-203ENST00000535915 NDUFA4L2Q9NRX3 87 aa10.68□□□□□ -0.7
LDLR-203ENST00000535915 TMEM106BQ9NUM4 274 aa10.68□□□□□ -0.7
LDLR-203ENST00000535915 PLXNB1O43157 2135 aa10.68□□□□□ -0.7
LDLR-203ENST00000535915 VSTM5A8MXK1 200 aa10.68□□□□□ -0.7
LDLR-203ENST00000535915 C9JCJ5 164 aa10.68□□□□□ -0.7
LDLR-203ENST00000535915 AREGP15514 252 aa10.68□□□□□ -0.7
LDLR-203ENST00000535915 GAGE1Q13065 139 aa10.68□□□□□ -0.7
LDLR-203ENST00000535915 DIAPH2-AS1Q14236 149 aa10.68□□□□□ -0.7
LDLR-203ENST00000535915 HLA-DRB5Q30154 266 aa10.68□□□□□ -0.7
LDLR-203ENST00000535915 TMEM177Q53S58 311 aa10.68□□□□□ -0.7
LDLR-203ENST00000535915 Q8NA96 180 aa10.68□□□□□ -0.7
LDLR-203ENST00000535915 E7EUB6 86 aa10.67□□□□□ -0.7
LDLR-203ENST00000535915 SLC17A3O00476 420 aa10.67□□□□□ -0.7
LDLR-203ENST00000535915 USF1P22415 310 aaPredicted RBP10.67□□□□□ -0.7
LDLR-203ENST00000535915 ZNF90Q03938 601 aa10.67□□□□□ -0.7
LDLR-203ENST00000535915 ZNF705AQ6ZN79 300 aaPredicted RBP10.67□□□□□ -0.7
LDLR-203ENST00000535915 OR4C13Q8NGP0 309 aa10.67□□□□□ -0.7
LDLR-203ENST00000535915 EAF1Q96JC9 268 aaPredicted RBP10.67□□□□□ -0.7
LDLR-203ENST00000535915 M0QZK8 103 aa10.67□□□□□ -0.7
LDLR-203ENST00000535915 DLL1O00548 723 aa10.67□□□□□ -0.7
LDLR-203ENST00000535915 SCGB1D1O95968 90 aa10.67□□□□□ -0.7
LDLR-203ENST00000535915 OR10J4P0C629 311 aa10.67□□□□□ -0.7
LDLR-203ENST00000535915 CRYBB3P26998 211 aa10.67□□□□□ -0.7
LDLR-203ENST00000535915 TAS2R45P59539 299 aa10.67□□□□□ -0.7
LDLR-203ENST00000535915 PQLC2Q6ZP29 291 aa10.67□□□□□ -0.7
LDLR-203ENST00000535915 OR2T6Q8NHC8 308 aa10.67□□□□□ -0.7
LDLR-203ENST00000535915 TMEM18Q96B42 140 aa10.67□□□□□ -0.7
LDLR-203ENST00000535915 DYNLRB1Q9NP97 96 aa10.67□□□□□ -0.7
LDLR-203ENST00000535915 JKAMPQ9P055 326 aa10.67□□□□□ -0.7
LDLR-203ENST00000535915 ARL2-SNX15V9GYD0 113 aa10.67□□□□□ -0.7
LDLR-203ENST00000535915 HELTA6NFD8 242 aa10.66□□□□□ -0.7
LDLR-203ENST00000535915 RNASE6Q93091 150 aaKnown RBP10.66□□□□□ -0.7
LDLR-203ENST00000535915 ZNF503Q96F45 646 aa10.66□□□□□ -0.7
LDLR-203ENST00000535915 C19orf24Q9BVV8 132 aa10.66□□□□□ -0.7
LDLR-203ENST00000535915 IL36BQ9NZH7 164 aa10.66□□□□□ -0.7
LDLR-203ENST00000535915 OR5G3P0C626 314 aa10.66□□□□□ -0.7
LDLR-203ENST00000535915 GNG4P50150 75 aa10.66□□□□□ -0.7
LDLR-203ENST00000535915 OR5I1Q13606 314 aa10.66□□□□□ -0.7
LDLR-203ENST00000535915 PDPNQ86YL7 162 aa10.66□□□□□ -0.7
LDLR-203ENST00000535915 VSTM2AQ8TAG5 236 aa10.66□□□□□ -0.7
LDLR-203ENST00000535915 TMEM186Q96B77 213 aa10.66□□□□□ -0.7
LDLR-203ENST00000535915 WFIKKN1Q96NZ8 548 aa10.66□□□□□ -0.7
LDLR-203ENST00000535915 CTSZQ9UBR2 303 aa10.66□□□□□ -0.7
LDLR-203ENST00000535915 LY96Q9Y6Y9 160 aa10.66□□□□□ -0.7
LDLR-203ENST00000535915 MUC6Q6W4X9 2439 aa10.66□□□□□ -0.7
LDLR-203ENST00000535915 CENPWQ5EE01 88 aa10.65□□□□□ -0.7
LDLR-203ENST00000535915 ASCL5Q7RTU5 278 aa10.65□□□□□ -0.7
LDLR-203ENST00000535915 TMEM167AQ8TBQ9 72 aa10.65□□□□□ -0.7
LDLR-203ENST00000535915 CACNG8Q8WXS5 425 aa10.65□□□□□ -0.7
LDLR-203ENST00000535915 PTPRZ1P23471 2315 aaPredicted RBP10.65□□□□□ -0.7
LDLR-203ENST00000535915 A0A1W2PN81 502 aa10.65□□□□□ -0.7
LDLR-203ENST00000535915 ADMP35318 185 aa10.65□□□□□ -0.7
LDLR-203ENST00000535915 C10orf55Q5SWW7 151 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms