RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 GALNT14Q96FL9 552 aa7.79□□□□□ -1.16
CSDE1-217ENST00000534699 TEX13DA0A0J9YY54 714 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-217ENST00000534699 A0A1W2PS18 150 aa7.79□□□□□ -1.16
CSDE1-217ENST00000534699 CDS2O95674 445 aa7.79□□□□□ -1.16
CSDE1-217ENST00000534699 IGKV1-39P01597 117 aa7.79□□□□□ -1.16
CSDE1-217ENST00000534699 IGKV1D-39P04432 117 aa7.79□□□□□ -1.16
CSDE1-217ENST00000534699 SLC25A4P12235 298 aa7.79□□□□□ -1.16
CSDE1-217ENST00000534699 PAFAH1B2P68402 229 aa7.79□□□□□ -1.16
CSDE1-217ENST00000534699 BSXQ3C1V8 233 aa7.79□□□□□ -1.16
CSDE1-217ENST00000534699 Q56UQ5 140 aa7.79□□□□□ -1.16
CSDE1-217ENST00000534699 ETFRF1Q6IPR1 90 aa7.79□□□□□ -1.16
CSDE1-217ENST00000534699 TMEM217Q8N7C4 229 aa7.79□□□□□ -1.16
CSDE1-217ENST00000534699 TMEM222Q9H0R3 208 aa7.79□□□□□ -1.16
CSDE1-217ENST00000534699 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-217ENST00000534699 SCP2D1Q9UJQ7 156 aa7.79□□□□□ -1.16
CSDE1-217ENST00000534699 KCNIP3Q9Y2W7 256 aa7.79□□□□□ -1.16
CSDE1-217ENST00000534699 IGHV7-4-1A0A0J9YVY3 117 aa7.78□□□□□ -1.16
CSDE1-217ENST00000534699 CD3DP04234 171 aa7.78□□□□□ -1.16
CSDE1-217ENST00000534699 REG1AP05451 166 aa7.78□□□□□ -1.16
CSDE1-217ENST00000534699 CTSGP08311 255 aa7.78□□□□□ -1.16
CSDE1-217ENST00000534699 FAUP35544 74 aaKnown RBP7.78□□□□□ -1.16
CSDE1-217ENST00000534699 NUP62P37198 522 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-217ENST00000534699 SNCAP37840 140 aa7.78□□□□□ -1.16
CSDE1-217ENST00000534699 DEFA5Q01523 94 aa7.78□□□□□ -1.16
CSDE1-217ENST00000534699 DYNC2LI1Q8TCX1 351 aa7.78□□□□□ -1.16
CSDE1-217ENST00000534699 RNASEH2CQ8TDP1 164 aaKnown RBP7.78□□□□□ -1.16
CSDE1-217ENST00000534699 GPHA2Q96T91 129 aa7.78□□□□□ -1.16
CSDE1-217ENST00000534699 RBMY1BA6NDE4 496 aaKnown RBP7.78□□□□□ -1.16
CSDE1-217ENST00000534699 RBMY1EA6NEQ0 496 aaKnown RBP7.78□□□□□ -1.16
CSDE1-217ENST00000534699 F8W735 103 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-217ENST00000534699 RBMY1DP0C7P1 496 aaKnown RBP7.78□□□□□ -1.16
CSDE1-217ENST00000534699 HTR2BP41595 481 aa7.78□□□□□ -1.16
CSDE1-217ENST00000534699 MFAP2P55001 183 aa7.78□□□□□ -1.16
CSDE1-217ENST00000534699 AP3S2P59780 193 aa7.78□□□□□ -1.16
CSDE1-217ENST00000534699 TMEM116Q8NCL8 245 aa7.78□□□□□ -1.16
CSDE1-217ENST00000534699 GATAD1Q8WUU5 269 aa7.78□□□□□ -1.16
CSDE1-217ENST00000534699 MIXL1Q9H2W2 232 aa7.78□□□□□ -1.16
CSDE1-217ENST00000534699 NAA60Q9H7X0 242 aa7.78□□□□□ -1.16
CSDE1-217ENST00000534699 GPR132Q9UNW8 380 aa7.78□□□□□ -1.16
CSDE1-217ENST00000534699 TMEM56-RWDD3S4R434 201 aa7.78□□□□□ -1.16
CSDE1-217ENST00000534699 LCE6AA0A183 80 aa7.77□□□□□ -1.16
CSDE1-217ENST00000534699 ZNF701M0R085 212 aaPredicted RBP7.77□□□□□ -1.16
CSDE1-217ENST00000534699 EIF2B2P49770 351 aaKnown RBP7.77□□□□□ -1.16
CSDE1-217ENST00000534699 AKR1C2P52895 323 aa7.77□□□□□ -1.16
CSDE1-217ENST00000534699 HAPLN4Q86UW8 402 aa7.77□□□□□ -1.16
CSDE1-217ENST00000534699 OR13C8Q8NGS7 320 aa7.77□□□□□ -1.16
CSDE1-217ENST00000534699 OR4X1Q8NH49 305 aa7.77□□□□□ -1.16
CSDE1-217ENST00000534699 RBPMSQ93062 196 aaKnown RBP7.77□□□□□ -1.16
CSDE1-217ENST00000534699 MRGPRFQ96AM1 343 aa7.77□□□□□ -1.16
CSDE1-217ENST00000534699 SOSTQ9BQB4 213 aa7.77□□□□□ -1.16
CSDE1-217ENST00000534699 VSIRQ9H7M9 311 aa7.77□□□□□ -1.16
CSDE1-217ENST00000534699 ANKRD20A5PA0PJZ0 165 aa7.77□□□□□ -1.17
CSDE1-217ENST00000534699 GNG7O60262 68 aa7.77□□□□□ -1.17
CSDE1-217ENST00000534699 CNPY1Q3B7I2 92 aa7.77□□□□□ -1.17
CSDE1-217ENST00000534699 TM4SF20Q53R12 229 aa7.77□□□□□ -1.17
CSDE1-217ENST00000534699 C2orf83Q53S99 150 aa7.77□□□□□ -1.17
CSDE1-217ENST00000534699 WDR89Q96FK6 387 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-217ENST00000534699 NARS2Q96I59 477 aaKnown RBP7.77□□□□□ -1.17
CSDE1-217ENST00000534699 HINT2Q9BX68 163 aa7.77□□□□□ -1.17
CSDE1-217ENST00000534699 KLK11Q9UBX7 282 aa7.77□□□□□ -1.17
CSDE1-217ENST00000534699 DNAH9Q9NYC9 4486 aa7.77□□□□□ -1.17
CSDE1-217ENST00000534699 OR2T8A6NH00 312 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 CRYM-AS1A6NIL9 109 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 M0QYG6 137 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 MT-CO2P00403 227 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 IGKV1-5P01602 117 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 CD7P09564 240 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 SLC25A6P12236 298 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 ADMP35318 185 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 FAM90A2PQ658T7 463 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 BTNL8Q6UX41 500 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 UNQ9165/PRO28630Q6UXU0 137 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 OR1S2Q8NGQ3 325 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 GRAMD2BQ96HH9 432 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 TRAV14DV4A0A0A6YYC5 116 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 CHEK1O14757 476 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 ST8SIA3O43173 380 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 JTBO76095 146 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 RNASE2P10153 161 aaKnown RBP7.76□□□□□ -1.17
CSDE1-217ENST00000534699 ANXA3P12429 323 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 TRIM16LQ309B1 348 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 TP53RKQ96S44 253 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 PFDN2Q9UHV9 154 aa7.76□□□□□ -1.17
CSDE1-217ENST00000534699 CLN5O75503 358 aa7.75□□□□□ -1.17
CSDE1-217ENST00000534699 TMEM50AO95807 157 aa7.75□□□□□ -1.17
CSDE1-217ENST00000534699 IFNA17P01571 189 aa7.75□□□□□ -1.17
CSDE1-217ENST00000534699 IGHV3-23P01764 117 aa7.75□□□□□ -1.17
CSDE1-217ENST00000534699 CCR6P51684 374 aa7.75□□□□□ -1.17
CSDE1-217ENST00000534699 YPEL3P61236 119 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-217ENST00000534699 TNFRSF9Q07011 255 aa7.75□□□□□ -1.17
CSDE1-217ENST00000534699 DEFB125Q8N687 156 aa7.75□□□□□ -1.17
CSDE1-217ENST00000534699 STPG3Q8N7X2 389 aa7.75□□□□□ -1.17
CSDE1-217ENST00000534699 MISP3Q96FF7 219 aa7.75□□□□□ -1.17
CSDE1-217ENST00000534699 DIRAS2Q96HU8 199 aa7.75□□□□□ -1.17
CSDE1-217ENST00000534699 A0A0B4J293 547 aa7.75□□□□□ -1.17
CSDE1-217ENST00000534699 RGS5O15539 181 aa7.75□□□□□ -1.17
CSDE1-217ENST00000534699 UBE2MP61081 183 aaKnown RBP7.75□□□□□ -1.17
CSDE1-217ENST00000534699 CLVS1Q8IUQ0 354 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-217ENST00000534699 CHRDL1Q9BU40 450 aa7.75□□□□□ -1.17
CSDE1-217ENST00000534699 NAA50Q9GZZ1 169 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms