RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 MISP3Q96FF7 219 aa11.78□□□□□ -0.52
LDLRAD3-205ENST00000532490 SPAG8Q99932 426 aaPredicted RBP11.78□□□□□ -0.52
LDLRAD3-205ENST00000532490 C20orf24Q9BUV8 137 aa11.78□□□□□ -0.52
LDLRAD3-205ENST00000532490 GAR1Q9NY12 217 aaKnown RBP11.78□□□□□ -0.52
LDLRAD3-205ENST00000532490 COPZ2Q9P299 210 aa11.78□□□□□ -0.52
LDLRAD3-205ENST00000532490 A0A0G2JRQ6 117 aa11.77□□□□□ -0.53
LDLRAD3-205ENST00000532490 CTDSPLO15194 276 aa11.77□□□□□ -0.53
LDLRAD3-205ENST00000532490 ST8SIA3O43173 380 aa11.77□□□□□ -0.53
LDLRAD3-205ENST00000532490 ZNF207O43670 478 aaKnown RBP11.77□□□□□ -0.53
LDLRAD3-205ENST00000532490 TMBIM6P55061 237 aa11.77□□□□□ -0.53
LDLRAD3-205ENST00000532490 ERHP84090 104 aaKnown RBP11.77□□□□□ -0.53
LDLRAD3-205ENST00000532490 SCGB2B2Q4G0G5 96 aa11.77□□□□□ -0.53
LDLRAD3-205ENST00000532490 SPINK9Q5DT21 86 aa11.77□□□□□ -0.53
LDLRAD3-205ENST00000532490 FAAP20Q6NZ36 180 aa11.77□□□□□ -0.53
LDLRAD3-205ENST00000532490 CCDC71LQ8N9Z2 235 aa11.77□□□□□ -0.53
LDLRAD3-205ENST00000532490 OR10C1Q96KK4 312 aa11.77□□□□□ -0.53
LDLRAD3-205ENST00000532490 BCL7BQ9BQE9 202 aa11.77□□□□□ -0.53
LDLRAD3-205ENST00000532490 RTBDNQ9BSG5 229 aaPredicted RBP11.77□□□□□ -0.53
LDLRAD3-205ENST00000532490 NXF2Q9GZY0 626 aaKnown RBP11.77□□□□□ -0.53
LDLRAD3-205ENST00000532490 CCDC59Q9P031 241 aaKnown RBP11.77□□□□□ -0.53
LDLRAD3-205ENST00000532490 SMPXQ9UHP9 88 aa11.77□□□□□ -0.53
LDLRAD3-205ENST00000532490 DNAH1Q9P2D7 4330 aa11.77□□□□□ -0.53
LDLRAD3-205ENST00000532490 NUPL2O15504 423 aaKnown RBP11.76□□□□□ -0.53
LDLRAD3-205ENST00000532490 IGHV3-48P01763 117 aa11.76□□□□□ -0.53
LDLRAD3-205ENST00000532490 AKR1C2P52895 323 aa11.76□□□□□ -0.53
LDLRAD3-205ENST00000532490 RELQ04864 619 aaPredicted RBP11.76□□□□□ -0.53
LDLRAD3-205ENST00000532490 MEF2DQ14814 521 aa11.76□□□□□ -0.53
LDLRAD3-205ENST00000532490 Q6ZRM9 215 aa11.76□□□□□ -0.53
LDLRAD3-205ENST00000532490 DIRAS2Q96HU8 199 aa11.76□□□□□ -0.53
LDLRAD3-205ENST00000532490 GGTLC1Q9BX51 225 aa11.76□□□□□ -0.53
LDLRAD3-205ENST00000532490 LOC102724200A0A096LPH7 203 aaPredicted RBP11.75□□□□□ -0.53
LDLRAD3-205ENST00000532490 B3GALNT1O75752 331 aa11.75□□□□□ -0.53
LDLRAD3-205ENST00000532490 ATG12O94817 140 aa11.75□□□□□ -0.53
LDLRAD3-205ENST00000532490 CDS2O95674 445 aa11.75□□□□□ -0.53
LDLRAD3-205ENST00000532490 TRIM16LQ309B1 348 aa11.75□□□□□ -0.53
LDLRAD3-205ENST00000532490 ODF3L2Q3SX64 289 aa11.75□□□□□ -0.53
LDLRAD3-205ENST00000532490 AARDQ4LEZ3 155 aa11.75□□□□□ -0.53
LDLRAD3-205ENST00000532490 LAMTOR1Q6IAA8 161 aa11.75□□□□□ -0.53
LDLRAD3-205ENST00000532490 OR4C16Q8NGL9 310 aa11.75□□□□□ -0.53
LDLRAD3-205ENST00000532490 LHFPL5Q8TAF8 219 aa11.75□□□□□ -0.53
LDLRAD3-205ENST00000532490 GLYATL2Q8WU03 294 aa11.75□□□□□ -0.53
LDLRAD3-205ENST00000532490 PINX1Q96BK5 328 aaKnown RBP11.75□□□□□ -0.53
LDLRAD3-205ENST00000532490 SOSTQ9BQB4 213 aa11.75□□□□□ -0.53
LDLRAD3-205ENST00000532490 SLIRPQ9GZT3 109 aaKnown RBP11.75□□□□□ -0.53
LDLRAD3-205ENST00000532490 TMEM222Q9H0R3 208 aa11.75□□□□□ -0.53
LDLRAD3-205ENST00000532490 RABL2AQ9UBK7 228 aaPredicted RBP11.75□□□□□ -0.53
LDLRAD3-205ENST00000532490 RABL2BQ9UNT1 228 aa11.75□□□□□ -0.53
LDLRAD3-205ENST00000532490 GPR132Q9UNW8 380 aa11.75□□□□□ -0.53
LDLRAD3-205ENST00000532490 IGHV7-4-1A0A0J9YVY3 117 aa11.74□□□□□ -0.53
LDLRAD3-205ENST00000532490 CHEK1O14757 476 aa11.74□□□□□ -0.53
LDLRAD3-205ENST00000532490 IFNA17P01571 189 aa11.74□□□□□ -0.53
LDLRAD3-205ENST00000532490 OR5AC1P0C628 307 aa11.74□□□□□ -0.53
LDLRAD3-205ENST00000532490 RNASE2P10153 161 aaKnown RBP11.74□□□□□ -0.53
LDLRAD3-205ENST00000532490 ETV6P41212 452 aa11.74□□□□□ -0.53
LDLRAD3-205ENST00000532490 IL18Q14116 193 aa11.74□□□□□ -0.53
LDLRAD3-205ENST00000532490 SURF2Q15527 256 aaPredicted RBP11.74□□□□□ -0.53
LDLRAD3-205ENST00000532490 RNF2Q99496 336 aa11.74□□□□□ -0.53
LDLRAD3-205ENST00000532490 OVOL2Q9BRP0 275 aa11.74□□□□□ -0.53
LDLRAD3-205ENST00000532490 UBQLN2Q9UHD9 624 aa11.74□□□□□ -0.53
LDLRAD3-205ENST00000532490 TEX13DA0A0J9YY54 714 aaPredicted RBP11.73□□□□□ -0.53
LDLRAD3-205ENST00000532490 LCE6AA0A183 80 aa11.73□□□□□ -0.53
LDLRAD3-205ENST00000532490 ANKRD20A5PA0PJZ0 165 aa11.73□□□□□ -0.53
LDLRAD3-205ENST00000532490 DISC1C4P0D8 188 aa11.73□□□□□ -0.53
LDLRAD3-205ENST00000532490 GSTZ1O43708 216 aaPredicted RBP11.73□□□□□ -0.53
LDLRAD3-205ENST00000532490 GNG7O60262 68 aa11.73□□□□□ -0.53
LDLRAD3-205ENST00000532490 AKAIN1P0CW23 69 aa11.73□□□□□ -0.53
LDLRAD3-205ENST00000532490 SNCAP37840 140 aa11.73□□□□□ -0.53
LDLRAD3-205ENST00000532490 RPL5P46777 297 aaKnown RBP11.73□□□□□ -0.53
LDLRAD3-205ENST00000532490 BSXQ3C1V8 233 aa11.73□□□□□ -0.53
LDLRAD3-205ENST00000532490 FAM90A2PQ658T7 463 aa11.73□□□□□ -0.53
LDLRAD3-205ENST00000532490 SLC35G3Q8N808 338 aa11.73□□□□□ -0.53
LDLRAD3-205ENST00000532490 TMEM116Q8NCL8 245 aa11.73□□□□□ -0.53
LDLRAD3-205ENST00000532490 RRNAD1Q96FB5 475 aaKnown RBP11.73□□□□□ -0.53
LDLRAD3-205ENST00000532490 RHPN1-AS1Q9BWJ2 59 aa11.73□□□□□ -0.53
LDLRAD3-205ENST00000532490 NAA60Q9H7X0 242 aa11.73□□□□□ -0.53
LDLRAD3-205ENST00000532490 C14orf166Q9Y224 244 aaKnown RBP11.73□□□□□ -0.53
LDLRAD3-205ENST00000532490 TRAV14DV4A0A0A6YYC5 116 aa11.72□□□□□ -0.53
LDLRAD3-205ENST00000532490 CRYM-AS1A6NIL9 109 aa11.72□□□□□ -0.53
LDLRAD3-205ENST00000532490 H3BMQ9 156 aa11.72□□□□□ -0.53
LDLRAD3-205ENST00000532490 YIF1AO95070 293 aa11.72□□□□□ -0.53
LDLRAD3-205ENST00000532490 TMEM50AO95807 157 aa11.72□□□□□ -0.53
LDLRAD3-205ENST00000532490 TOMM20LQ6UXN7 152 aa11.72□□□□□ -0.53
LDLRAD3-205ENST00000532490 FAM219AQ8IW50 185 aa11.72□□□□□ -0.53
LDLRAD3-205ENST00000532490 SELENOHQ8IZQ5 122 aaKnown RBP11.72□□□□□ -0.53
LDLRAD3-205ENST00000532490 DUSP18Q8NEJ0 188 aa11.72□□□□□ -0.53
LDLRAD3-205ENST00000532490 OR51S1Q8NGJ8 323 aa11.72□□□□□ -0.53
LDLRAD3-205ENST00000532490 FNDC4Q9H6D8 234 aaPredicted RBP11.72□□□□□ -0.53
LDLRAD3-205ENST00000532490 MRPL36Q9P0J6 103 aaKnown RBP11.72□□□□□ -0.53
LDLRAD3-205ENST00000532490 IGHV3-49A0A0A0MS15 119 aa11.71□□□□□ -0.53
LDLRAD3-205ENST00000532490 OR4C46A6NHA9 309 aa11.71□□□□□ -0.53
LDLRAD3-205ENST00000532490 TNFSF8P32971 234 aa11.71□□□□□ -0.53
LDLRAD3-205ENST00000532490 NPBWR1P48145 328 aa11.71□□□□□ -0.53
LDLRAD3-205ENST00000532490 SUB1P53999 127 aaKnown RBP eCLIP11.71□□□□□ -0.53
LDLRAD3-205ENST00000532490 DHODHQ02127 395 aa11.71□□□□□ -0.53
LDLRAD3-205ENST00000532490 MLANAQ16655 118 aa11.71□□□□□ -0.53
LDLRAD3-205ENST00000532490 OR52E5Q8NH55 327 aa11.71□□□□□ -0.53
LDLRAD3-205ENST00000532490 RBPMSQ93062 196 aaKnown RBP11.71□□□□□ -0.53
LDLRAD3-205ENST00000532490 PRRT1Q99946 306 aa11.71□□□□□ -0.53
LDLRAD3-205ENST00000532490 PDCD10Q9BUL8 212 aa11.71□□□□□ -0.53
LDLRAD3-205ENST00000532490 C6orf62Q9GZU0 229 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms