RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 PTTG1O95997 202 aa11.79□□□□□ -0.52
CCS-206ENST00000530961 MFAP2P55001 183 aa11.79□□□□□ -0.52
CCS-206ENST00000530961 ATP5IP56385 69 aaPredicted RBP11.79□□□□□ -0.52
CCS-206ENST00000530961 DEFA5Q01523 94 aa11.79□□□□□ -0.52
CCS-206ENST00000530961 DCTN2Q13561 401 aaKnown RBP11.79□□□□□ -0.52
CCS-206ENST00000530961 BSXQ3C1V8 233 aa11.79□□□□□ -0.52
CCS-206ENST00000530961 PVRIGQ6DKI7 326 aa11.79□□□□□ -0.52
CCS-206ENST00000530961 NOXA1Q86UR1 476 aa11.79□□□□□ -0.52
CCS-206ENST00000530961 ATP6V0BQ99437 205 aa11.79□□□□□ -0.52
CCS-206ENST00000530961 U3KQ87 197 aa11.79□□□□□ -0.52
CCS-206ENST00000530961 IGHV4OR15-8A0A075B7B6 117 aa11.78□□□□□ -0.52
CCS-206ENST00000530961 A0A087WW49 117 aa11.78□□□□□ -0.52
CCS-206ENST00000530961 ANKRD34BA5PLL1 514 aa11.78□□□□□ -0.52
CCS-206ENST00000530961 LY86O95711 162 aa11.78□□□□□ -0.52
CCS-206ENST00000530961 RNASE2P10153 161 aaKnown RBP11.78□□□□□ -0.52
CCS-206ENST00000530961 UXS1Q8NBZ7 420 aa11.78□□□□□ -0.52
CCS-206ENST00000530961 DTD1Q8TEA8 209 aa11.78□□□□□ -0.52
CCS-206ENST00000530961 RCC1LQ96I51 464 aaKnown RBP11.78□□□□□ -0.52
CCS-206ENST00000530961 MCRIP2Q9BUT9 160 aaKnown RBP11.78□□□□□ -0.52
CCS-206ENST00000530961 RBKSQ9H477 322 aa11.78□□□□□ -0.52
CCS-206ENST00000530961 NXPH3O95157 252 aa11.77□□□□□ -0.53
CCS-206ENST00000530961 ID3Q02535 119 aa11.77□□□□□ -0.53
CCS-206ENST00000530961 C2orf83Q53S99 150 aa11.77□□□□□ -0.53
CCS-206ENST00000530961 SLC24A4Q8NFF2 622 aa11.77□□□□□ -0.53
CCS-206ENST00000530961 ZNF502Q8TBZ5 544 aa11.77□□□□□ -0.53
CCS-206ENST00000530961 SCARB1Q8WTV0 552 aa11.77□□□□□ -0.53
CCS-206ENST00000530961 MISP3Q96FF7 219 aa11.77□□□□□ -0.53
CCS-206ENST00000530961 CIB3Q96Q77 187 aaPredicted RBP11.77□□□□□ -0.53
CCS-206ENST00000530961 GAR1Q9NY12 217 aaKnown RBP11.77□□□□□ -0.53
CCS-206ENST00000530961 MFSD2BA6NFX1 497 aa11.76□□□□□ -0.53
CCS-206ENST00000530961 MPTX1A8MV57 137 aa11.76□□□□□ -0.53
CCS-206ENST00000530961 I3L2K1 104 aa11.76□□□□□ -0.53
CCS-206ENST00000530961 K7EIM0 57 aa11.76□□□□□ -0.53
CCS-206ENST00000530961 TRBV12-3P01733 135 aa11.76□□□□□ -0.53
CCS-206ENST00000530961 CLEC3BP05452 202 aa11.76□□□□□ -0.53
CCS-206ENST00000530961 HOXD3P31249 432 aaPredicted RBP11.76□□□□□ -0.53
CCS-206ENST00000530961 NKX2-1P43699 371 aaPredicted RBP11.76□□□□□ -0.53
CCS-206ENST00000530961 TATDN3Q17R31 274 aa11.76□□□□□ -0.53
CCS-206ENST00000530961 IAH1Q2TAA2 248 aaPredicted RBP11.76□□□□□ -0.53
CCS-206ENST00000530961 CLEC19AQ6UXS0 136 aa11.76□□□□□ -0.53
CCS-206ENST00000530961 CCDC140Q96MF4 163 aa11.76□□□□□ -0.53
CCS-206ENST00000530961 GPR61Q9BZJ8 451 aa11.76□□□□□ -0.53
CCS-206ENST00000530961 C21orf62Q9NYP8 219 aa11.76□□□□□ -0.53
CCS-206ENST00000530961 BIRC6Q9NR09 4857 aa11.76□□□□□ -0.53
CCS-206ENST00000530961 SYNGR2O43760 224 aa11.75□□□□□ -0.53
CCS-206ENST00000530961 GGCTO75223 188 aaKnown RBP11.75□□□□□ -0.53
CCS-206ENST00000530961 MT-CO2P00403 227 aa11.75□□□□□ -0.53
CCS-206ENST00000530961 IFNA10P01566 189 aa11.75□□□□□ -0.53
CCS-206ENST00000530961 IGHV3-23P01764 117 aa11.75□□□□□ -0.53
CCS-206ENST00000530961 FCGR2BP31994 310 aaPredicted RBP11.75□□□□□ -0.53
CCS-206ENST00000530961 RPP30P78346 268 aaKnown RBP11.75□□□□□ -0.53
CCS-206ENST00000530961 KLF5Q13887 457 aaPredicted RBP11.75□□□□□ -0.53
CCS-206ENST00000530961 RPEL1Q2QD12 228 aa11.75□□□□□ -0.53
CCS-206ENST00000530961 OR4D5Q8NGN0 318 aa11.75□□□□□ -0.53
CCS-206ENST00000530961 RNASEH2CQ8TDP1 164 aaKnown RBP11.75□□□□□ -0.53
CCS-206ENST00000530961 DCUN1D4Q92564 292 aa11.75□□□□□ -0.53
CCS-206ENST00000530961 DLX4Q92988 240 aaPredicted RBP11.75□□□□□ -0.53
CCS-206ENST00000530961 PINX1Q96BK5 328 aaKnown RBP11.75□□□□□ -0.53
CCS-206ENST00000530961 OR10C1Q96KK4 312 aa11.75□□□□□ -0.53
CCS-206ENST00000530961 TXN2Q99757 166 aa11.75□□□□□ -0.53
CCS-206ENST00000530961 S4R3C0 116 aa11.75□□□□□ -0.53
CCS-206ENST00000530961 PLXNB1O43157 2135 aa11.74□□□□□ -0.53
CCS-206ENST00000530961 TNCP24821 2201 aa11.74□□□□□ -0.53
CCS-206ENST00000530961 RPS10-NUDT3A0A1W2PQS6 291 aa11.74□□□□□ -0.53
CCS-206ENST00000530961 C5orf51A6NDU8 294 aa11.74□□□□□ -0.53
CCS-206ENST00000530961 BMPR1BO00238 502 aa11.74□□□□□ -0.53
CCS-206ENST00000530961 OVOL1O14753 267 aa11.74□□□□□ -0.53
CCS-206ENST00000530961 SPNP16150 400 aa11.74□□□□□ -0.53
CCS-206ENST00000530961 NPY1RP25929 384 aa11.74□□□□□ -0.53
CCS-206ENST00000530961 SLURP1P55000 103 aa11.74□□□□□ -0.53
CCS-206ENST00000530961 MFAP4P55083 255 aa11.74□□□□□ -0.53
CCS-206ENST00000530961 RGS21Q2M5E4 152 aa11.74□□□□□ -0.53
CCS-206ENST00000530961 SPSB3Q6PJ21 355 aa11.74□□□□□ -0.53
CCS-206ENST00000530961 ZBTB8BQ8NAP8 495 aaPredicted RBP11.74□□□□□ -0.53
CCS-206ENST00000530961 BSCL2Q96G97 398 aaPredicted RBP11.74□□□□□ -0.53
CCS-206ENST00000530961 GSKIPQ9P0R6 139 aa11.74□□□□□ -0.53
CCS-206ENST00000530961 IGHV3-21A0A0B4J1V1 117 aa11.73□□□□□ -0.53
CCS-206ENST00000530961 FAM25EA8MYX2 175 aa11.73□□□□□ -0.53
CCS-206ENST00000530961 WRBO00258 174 aa11.73□□□□□ -0.53
CCS-206ENST00000530961 GPR183P32249 361 aa11.73□□□□□ -0.53
CCS-206ENST00000530961 ARL3P36405 182 aa11.73□□□□□ -0.53
CCS-206ENST00000530961 OPRK1P41145 380 aa11.73□□□□□ -0.53
CCS-206ENST00000530961 GSG1LQ6UXU4 331 aa11.73□□□□□ -0.53
CCS-206ENST00000530961 GPHB5Q86YW7 130 aa11.73□□□□□ -0.53
CCS-206ENST00000530961 C2orf50Q96LR7 162 aa11.73□□□□□ -0.53
CCS-206ENST00000530961 MAGT1Q9H0U3 335 aa11.73□□□□□ -0.53
CCS-206ENST00000530961 TET2Q6N021 2002 aaPredicted RBP11.72□□□□□ -0.53
CCS-206ENST00000530961 PPP5D1E7EU14 171 aa11.72□□□□□ -0.53
CCS-206ENST00000530961 CCSO14618 274 aa11.72□□□□□ -0.53
CCS-206ENST00000530961 TGOLN2O43493 480 aa11.72□□□□□ -0.53
CCS-206ENST00000530961 OR2C1O95371 312 aa11.72□□□□□ -0.53
CCS-206ENST00000530961 IGLL1P15814 213 aa11.72□□□□□ -0.53
CCS-206ENST00000530961 NPBWR1P48145 328 aa11.72□□□□□ -0.53
CCS-206ENST00000530961 POLR2GP62487 172 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCS-206ENST00000530961 RAB11AP62491 216 aa11.72□□□□□ -0.53
CCS-206ENST00000530961 FAM106AQ4KMX7 169 aa11.72□□□□□ -0.53
CCS-206ENST00000530961 Q56UQ5 140 aa11.72□□□□□ -0.53
CCS-206ENST00000530961 ETFRF1Q6IPR1 90 aa11.72□□□□□ -0.53
CCS-206ENST00000530961 C1QL4Q86Z23 238 aa11.72□□□□□ -0.53
CCS-206ENST00000530961 RAB40CQ96S21 281 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms