RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 MIXL1Q9H2W2 232 aa11.72□□□□□ -0.53
COL16A1-216ENST00000529928 NDUFA4L2Q9NRX3 87 aa11.72□□□□□ -0.53
COL16A1-216ENST00000529928 TRAV14DV4A0A0A6YYC5 116 aa11.71□□□□□ -0.53
COL16A1-216ENST00000529928 SMIM31A0A1B0GVY4 71 aa11.71□□□□□ -0.53
COL16A1-216ENST00000529928 MARCH11A6NNE9 402 aa11.71□□□□□ -0.53
COL16A1-216ENST00000529928 C15orf61A6NNL5 157 aa11.71□□□□□ -0.53
COL16A1-216ENST00000529928 NUPL2O15504 423 aaKnown RBP11.71□□□□□ -0.53
COL16A1-216ENST00000529928 YIF1AO95070 293 aa11.71□□□□□ -0.53
COL16A1-216ENST00000529928 CD5P06127 495 aa11.71□□□□□ -0.53
COL16A1-216ENST00000529928 HERV-K104P61576 105 aa11.71□□□□□ -0.53
COL16A1-216ENST00000529928 AADACL3Q5VUY0 350 aa11.71□□□□□ -0.53
COL16A1-216ENST00000529928 FAM90A2PQ658T7 463 aa11.71□□□□□ -0.53
COL16A1-216ENST00000529928 MZT2AQ6P582 158 aa11.71□□□□□ -0.53
COL16A1-216ENST00000529928 GBGT1Q8N5D6 347 aa11.71□□□□□ -0.53
COL16A1-216ENST00000529928 Q8NAQ8 132 aa11.71□□□□□ -0.53
COL16A1-216ENST00000529928 HINT2Q9BX68 163 aa11.71□□□□□ -0.53
COL16A1-216ENST00000529928 IGHV3-49A0A0A0MS15 119 aa11.7□□□□□ -0.54
COL16A1-216ENST00000529928 PGLYRP1O75594 196 aaPredicted RBP11.7□□□□□ -0.54
COL16A1-216ENST00000529928 CENPSQ8N2Z9 138 aa11.7□□□□□ -0.54
COL16A1-216ENST00000529928 AP3S1Q92572 193 aa11.7□□□□□ -0.54
COL16A1-216ENST00000529928 BORCS5Q969J3 196 aa11.7□□□□□ -0.54
COL16A1-216ENST00000529928 DGCR14Q96DF8 476 aaKnown RBP11.7□□□□□ -0.54
COL16A1-216ENST00000529928 ZNF414Q96IQ9 312 aa11.7□□□□□ -0.54
COL16A1-216ENST00000529928 ABHD1Q96SE0 405 aa11.7□□□□□ -0.54
COL16A1-216ENST00000529928 IGHV4-4A0A075B6R2 117 aa11.69□□□□□ -0.54
COL16A1-216ENST00000529928 TRAV10A0A0B4J240 114 aa11.69□□□□□ -0.54
COL16A1-216ENST00000529928 DFFBO76075 338 aa11.69□□□□□ -0.54
COL16A1-216ENST00000529928 RCVRNP35243 200 aa11.69□□□□□ -0.54
COL16A1-216ENST00000529928 TCF24Q7RTU0 167 aa11.69□□□□□ -0.54
COL16A1-216ENST00000529928 OR6F1Q8NGZ6 308 aa11.69□□□□□ -0.54
COL16A1-216ENST00000529928 TMEM56Q96MV1 263 aa11.69□□□□□ -0.54
COL16A1-216ENST00000529928 KLK11Q9UBX7 282 aa11.69□□□□□ -0.54
COL16A1-216ENST00000529928 VPS13DQ5THJ4 4388 aa11.68□□□□□ -0.54
COL16A1-216ENST00000529928 SNAPC5O75971 98 aa11.68□□□□□ -0.54
COL16A1-216ENST00000529928 RLN1P04808 185 aa11.68□□□□□ -0.54
COL16A1-216ENST00000529928 F2RP25116 425 aa11.68□□□□□ -0.54
COL16A1-216ENST00000529928 HLA-DMBP28068 263 aa11.68□□□□□ -0.54
COL16A1-216ENST00000529928 CLVS1Q8IUQ0 354 aaPredicted RBP11.68□□□□□ -0.54
COL16A1-216ENST00000529928 CADM3Q8N126 398 aa11.68□□□□□ -0.54
COL16A1-216ENST00000529928 OR1P1Q8NH06 330 aa11.68□□□□□ -0.54
COL16A1-216ENST00000529928 OR52I2Q8NH67 350 aa11.68□□□□□ -0.54
COL16A1-216ENST00000529928 DYNC2LI1Q8TCX1 351 aa11.68□□□□□ -0.54
COL16A1-216ENST00000529928 TXN2Q99757 166 aa11.68□□□□□ -0.54
COL16A1-216ENST00000529928 GINS3Q9BRX5 216 aa11.68□□□□□ -0.54
COL16A1-216ENST00000529928 NXF2Q9GZY0 626 aaKnown RBP11.68□□□□□ -0.54
COL16A1-216ENST00000529928 EXTL2Q9UBQ6 330 aa11.68□□□□□ -0.54
COL16A1-216ENST00000529928 OR51B2Q9Y5P1 312 aa11.68□□□□□ -0.54
COL16A1-216ENST00000529928 IGHV3OR16-13A0A075B7E8 117 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 IGHV3-74A0A0B4J1X5 117 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 IGHV4-28A0A0C4DH34 117 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 FAM25AB3EWG3 89 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 FAM25CB3EWG5 89 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 FAM25GB3EWG6 89 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 DNASE2O00115 360 aaPredicted RBP11.67□□□□□ -0.54
COL16A1-216ENST00000529928 GPR31O00270 319 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 CTDSP2O14595 271 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 MIFP14174 115 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 TMBIM6P55061 237 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 MFAP4P55083 255 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 DEFB131AP59861 70 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 TMEM41BQ5BJD5 291 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 LEMD1Q68G75 181 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 PVRIGQ6DKI7 326 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 Q6ZTC4 211 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 STHQ8IWL8 128 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 RAB2BQ8WUD1 216 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 FCAMRQ8WWV6 532 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 BCL7BQ9BQE9 202 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 RNF126Q9BV68 326 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 MS4A6AQ9H2W1 248 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 FKBP11Q9NYL4 201 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 MTFP1Q9UDX5 166 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 PRNDQ9UKY0 176 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 NSG2Q9Y328 171 aa11.67□□□□□ -0.54
COL16A1-216ENST00000529928 TRAV2A0A0B4J234 112 aa11.66□□□□□ -0.54
COL16A1-216ENST00000529928 PRSS29PA6NIE9 313 aa11.66□□□□□ -0.54
COL16A1-216ENST00000529928 M0QYG6 137 aa11.66□□□□□ -0.54
COL16A1-216ENST00000529928 ST8SIA3O43173 380 aa11.66□□□□□ -0.54
COL16A1-216ENST00000529928 KRASP01116 189 aa11.66□□□□□ -0.54
COL16A1-216ENST00000529928 RBMY1A1P0DJD3 496 aaKnown RBP11.66□□□□□ -0.54
COL16A1-216ENST00000529928 RBMY1CP0DJD4 496 aa11.66□□□□□ -0.54
COL16A1-216ENST00000529928 RPL5P46777 297 aaKnown RBP11.66□□□□□ -0.54
COL16A1-216ENST00000529928 UCP3P55916 312 aa11.66□□□□□ -0.54
COL16A1-216ENST00000529928 RBMY1FQ15415 496 aaKnown RBP11.66□□□□□ -0.54
COL16A1-216ENST00000529928 LHFPL1Q86WI0 220 aa11.66□□□□□ -0.54
COL16A1-216ENST00000529928 I3L2K1 104 aa11.65□□□□□ -0.54
COL16A1-216ENST00000529928 GNG7O60262 68 aa11.65□□□□□ -0.54
COL16A1-216ENST00000529928 CD3DP04234 171 aa11.65□□□□□ -0.54
COL16A1-216ENST00000529928 LPAR6P43657 344 aa11.65□□□□□ -0.54
COL16A1-216ENST00000529928 TSPAN5P62079 268 aa11.65□□□□□ -0.54
COL16A1-216ENST00000529928 RNASE12Q5GAN4 147 aaKnown RBP11.65□□□□□ -0.54
COL16A1-216ENST00000529928 CMTM1Q8IZ96 169 aa11.65□□□□□ -0.54
COL16A1-216ENST00000529928 DUSP18Q8NEJ0 188 aa11.65□□□□□ -0.54
COL16A1-216ENST00000529928 ST8SIA2Q92186 375 aa11.65□□□□□ -0.54
COL16A1-216ENST00000529928 MISP3Q96FF7 219 aa11.65□□□□□ -0.54
COL16A1-216ENST00000529928 VSIRQ9H7M9 311 aa11.65□□□□□ -0.54
COL16A1-216ENST00000529928 CCDC59Q9P031 241 aaKnown RBP11.65□□□□□ -0.54
COL16A1-216ENST00000529928 ZNF705EA8MWA4 302 aaPredicted RBP11.64□□□□□ -0.55
COL16A1-216ENST00000529928 H3BMQ9 156 aa11.64□□□□□ -0.55
COL16A1-216ENST00000529928 AMBPP02760 352 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms