RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SFT2D2O95562 160 aa10.72□□□□□ -0.69
CAPN1-212ENST00000527887 HLA-AP01891 365 aaKnown RBP10.72□□□□□ -0.69
CAPN1-212ENST00000527887 CLEC3BP05452 202 aa10.72□□□□□ -0.69
CAPN1-212ENST00000527887 HNRNPCP07910 306 aaKnown RBP eCLIP10.72□□□□□ -0.69
CAPN1-212ENST00000527887 ANXA3P12429 323 aa10.72□□□□□ -0.69
CAPN1-212ENST00000527887 AKR1C4P17516 323 aa10.72□□□□□ -0.69
CAPN1-212ENST00000527887 CBLN1P23435 193 aa10.72□□□□□ -0.69
CAPN1-212ENST00000527887 CD81P60033 236 aa10.72□□□□□ -0.69
CAPN1-212ENST00000527887 PPP1R1AQ13522 171 aa10.72□□□□□ -0.69
CAPN1-212ENST00000527887 LINC00322Q6ZN03 302 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-212ENST00000527887 OR51H1Q8NH63 302 aa10.72□□□□□ -0.69
CAPN1-212ENST00000527887 TMEM230Q96A57 120 aa10.72□□□□□ -0.69
CAPN1-212ENST00000527887 CCDC140Q96MF4 163 aa10.72□□□□□ -0.69
CAPN1-212ENST00000527887 ATP6V0BQ99437 205 aa10.72□□□□□ -0.69
CAPN1-212ENST00000527887 SEC22CQ9BRL7 303 aa10.72□□□□□ -0.69
CAPN1-212ENST00000527887 FXYD6Q9H0Q3 95 aa10.72□□□□□ -0.69
CAPN1-212ENST00000527887 FAM212BQ9NTI7 297 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-212ENST00000527887 TMEM140Q9NV12 185 aa10.72□□□□□ -0.69
CAPN1-212ENST00000527887 IGLC7A0M8Q6 106 aa10.71□□□□□ -0.69
CAPN1-212ENST00000527887 DBX1A6NMT0 343 aa10.71□□□□□ -0.69
CAPN1-212ENST00000527887 GPR31O00270 319 aa10.71□□□□□ -0.69
CAPN1-212ENST00000527887 PGLYRP1O75594 196 aaPredicted RBP10.71□□□□□ -0.69
CAPN1-212ENST00000527887 S1PR2O95136 353 aa10.71□□□□□ -0.69
CAPN1-212ENST00000527887 ELLP55199 621 aaPredicted RBP10.71□□□□□ -0.69
CAPN1-212ENST00000527887 SUPT4H1P63272 117 aaKnown RBP10.71□□□□□ -0.69
CAPN1-212ENST00000527887 SRPXP78539 464 aa10.71□□□□□ -0.69
CAPN1-212ENST00000527887 ANKRD55Q3KP44 614 aa10.71□□□□□ -0.69
CAPN1-212ENST00000527887 SLC16A13Q7RTY0 426 aa10.71□□□□□ -0.69
CAPN1-212ENST00000527887 LRTM2Q8N967 370 aa10.71□□□□□ -0.69
CAPN1-212ENST00000527887 OR1L6Q8NGR2 347 aa10.71□□□□□ -0.69
CAPN1-212ENST00000527887 OR1L8Q8NGR8 309 aa10.71□□□□□ -0.69
CAPN1-212ENST00000527887 COQ8AQ8NI60 647 aa10.71□□□□□ -0.69
CAPN1-212ENST00000527887 VN1R17PQ8TDU5 208 aa10.71□□□□□ -0.69
CAPN1-212ENST00000527887 FKBP11Q9NYL4 201 aa10.71□□□□□ -0.69
CAPN1-212ENST00000527887 TRAV25A0A0B4J276 109 aa10.7□□□□□ -0.7
CAPN1-212ENST00000527887 ZNF320A2RRD8 509 aa10.7□□□□□ -0.7
CAPN1-212ENST00000527887 MARCH11A6NNE9 402 aa10.7□□□□□ -0.7
CAPN1-212ENST00000527887 REG1AP05451 166 aa10.7□□□□□ -0.7
CAPN1-212ENST00000527887 GIPP09681 153 aaPredicted RBP10.7□□□□□ -0.7
CAPN1-212ENST00000527887 PIGPP57054 158 aa10.7□□□□□ -0.7
CAPN1-212ENST00000527887 RAP2BP61225 183 aa10.7□□□□□ -0.7
CAPN1-212ENST00000527887 FCN2Q15485 313 aa10.7□□□□□ -0.7
CAPN1-212ENST00000527887 C19orf35Q6ZS72 473 aa10.7□□□□□ -0.7
CAPN1-212ENST00000527887 OR11H7Q8NGC8 314 aa10.7□□□□□ -0.7
CAPN1-212ENST00000527887 ZNF502Q8TBZ5 544 aa10.7□□□□□ -0.7
CAPN1-212ENST00000527887 ZNF436Q9C0F3 470 aaPredicted RBP10.7□□□□□ -0.7
CAPN1-212ENST00000527887 DYNC2H1Q8NCM8 4307 aaKnown RBP10.69□□□□□ -0.7
CAPN1-212ENST00000527887 TRAV3A0A0B4J244 114 aa10.69□□□□□ -0.7
CAPN1-212ENST00000527887 TEX13DA0A0J9YY54 714 aaPredicted RBP10.69□□□□□ -0.7
CAPN1-212ENST00000527887 TMEM213A2RRL7 107 aa10.69□□□□□ -0.7
CAPN1-212ENST00000527887 OR11H12B2RN74 326 aa10.69□□□□□ -0.7
CAPN1-212ENST00000527887 IGHV3-23P01764 117 aa10.69□□□□□ -0.7
CAPN1-212ENST00000527887 SERPINE2P07093 398 aa10.69□□□□□ -0.7
CAPN1-212ENST00000527887 CD7P09564 240 aa10.69□□□□□ -0.7
CAPN1-212ENST00000527887 C8orf88P0DMB2 117 aa10.69□□□□□ -0.7
CAPN1-212ENST00000527887 MYOD1P15172 320 aa10.69□□□□□ -0.7
CAPN1-212ENST00000527887 VAMP1P23763 118 aa10.69□□□□□ -0.7
CAPN1-212ENST00000527887 GUCA2BQ16661 112 aa10.69□□□□□ -0.7
CAPN1-212ENST00000527887 UXS1Q8NBZ7 420 aa10.69□□□□□ -0.7
CAPN1-212ENST00000527887 OR52B4Q8NGK2 314 aa10.69□□□□□ -0.7
CAPN1-212ENST00000527887 IL17DQ8TAD2 202 aa10.69□□□□□ -0.7
CAPN1-212ENST00000527887 LSM10Q969L4 123 aaKnown RBP10.69□□□□□ -0.7
CAPN1-212ENST00000527887 NAA60Q9H7X0 242 aa10.69□□□□□ -0.7
CAPN1-212ENST00000527887 PLEKHA3Q9HB20 300 aa10.69□□□□□ -0.7
CAPN1-212ENST00000527887 NDUFA4L2Q9NRX3 87 aa10.69□□□□□ -0.7
CAPN1-212ENST00000527887 MRPL27Q9P0M9 148 aaKnown RBP10.69□□□□□ -0.7
CAPN1-212ENST00000527887 UFC1Q9Y3C8 167 aa10.69□□□□□ -0.7
CAPN1-212ENST00000527887 CSMD3Q7Z407 3707 aa10.69□□□□□ -0.7
CAPN1-212ENST00000527887 TEX50A0A1B0GTY4 177 aa10.68□□□□□ -0.7
CAPN1-212ENST00000527887 DUXBA0A1W2PPF3 345 aa10.68□□□□□ -0.7
CAPN1-212ENST00000527887 MFSD2BA6NFX1 497 aa10.68□□□□□ -0.7
CAPN1-212ENST00000527887 C1QBP02746 253 aa10.68□□□□□ -0.7
CAPN1-212ENST00000527887 OR13C7P0DN81 318 aa10.68□□□□□ -0.7
CAPN1-212ENST00000527887 LPAR6P43657 344 aa10.68□□□□□ -0.7
CAPN1-212ENST00000527887 CYCSP99999 105 aaKnown RBP10.68□□□□□ -0.7
CAPN1-212ENST00000527887 SPSB3Q6PJ21 355 aa10.68□□□□□ -0.7
CAPN1-212ENST00000527887 OR5B3Q8NH48 314 aa10.68□□□□□ -0.7
CAPN1-212ENST00000527887 IL22RA2Q969J5 263 aa10.68□□□□□ -0.7
CAPN1-212ENST00000527887 TMEM56Q96MV1 263 aa10.68□□□□□ -0.7
CAPN1-212ENST00000527887 HIPK2Q9H2X6 1198 aa10.68□□□□□ -0.7
CAPN1-212ENST00000527887 MGAT4CQ9UBM8 478 aa10.68□□□□□ -0.7
CAPN1-212ENST00000527887 PRNDQ9UKY0 176 aa10.68□□□□□ -0.7
CAPN1-212ENST00000527887 KRASP01116 189 aa10.67□□□□□ -0.7
CAPN1-212ENST00000527887 CXCL3P19876 107 aa10.67□□□□□ -0.7
CAPN1-212ENST00000527887 PI3P19957 117 aa10.67□□□□□ -0.7
CAPN1-212ENST00000527887 GPR183P32249 361 aa10.67□□□□□ -0.7
CAPN1-212ENST00000527887 WT1-ASQ06250 92 aa10.67□□□□□ -0.7
CAPN1-212ENST00000527887 ZNF585BQ52M93 769 aa10.67□□□□□ -0.7
CAPN1-212ENST00000527887 SLC25A24Q6NUK1 477 aa10.67□□□□□ -0.7
CAPN1-212ENST00000527887 DEFB125Q8N687 156 aa10.67□□□□□ -0.7
CAPN1-212ENST00000527887 OR10W1Q8NGF6 305 aa10.67□□□□□ -0.7
CAPN1-212ENST00000527887 WDR89Q96FK6 387 aaPredicted RBP10.67□□□□□ -0.7
CAPN1-212ENST00000527887 BSCL2Q96G97 398 aaPredicted RBP10.67□□□□□ -0.7
CAPN1-212ENST00000527887 SRD5A3Q9H8P0 318 aa10.67□□□□□ -0.7
CAPN1-212ENST00000527887 GAR1Q9NY12 217 aaKnown RBP10.67□□□□□ -0.7
CAPN1-212ENST00000527887 OR51B2Q9Y5P1 312 aa10.67□□□□□ -0.7
CAPN1-212ENST00000527887 F11RQ9Y624 299 aaKnown RBP10.67□□□□□ -0.7
CAPN1-212ENST00000527887 S4R3C0 116 aa10.67□□□□□ -0.7
CAPN1-212ENST00000527887 LYSTQ99698 3801 aa10.67□□□□□ -0.7
CAPN1-212ENST00000527887 C3orf85A0A1B0GTC6 90 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms