RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 DYNLT3P51808 116 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 PTTG1IPP53801 180 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 YPEL3P61236 119 aaPredicted RBP3.28□□□□□ -1.88
CHD7-205ENST00000527825 FGF12P61328 243 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 ARF6P62330 175 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 RAB11AP62491 216 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 RPL23P62829 140 aaKnown RBP3.28□□□□□ -1.88
CHD7-205ENST00000527825 PAFAH1B2P68402 229 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 SERF2P84101 59 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 EGFEM1PQ0D2K5 195 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 SRSF7Q16629 238 aaKnown RBP eCLIP3.28□□□□□ -1.88
CHD7-205ENST00000527825 BSXQ3C1V8 233 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 TMEM155Q4W5P6 130 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 TOMM20LQ6UXN7 152 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 ZNF66Q6ZN08 573 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 SSX7Q7RTT5 188 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 LYZL2Q7Z4W2 148 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 MDP1Q86V88 176 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 Q8N976 141 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 WFDC9Q8NEX5 89 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 OR8B12Q8NGG6 310 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 PLPPR1Q8TBJ4 325 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 TMEM234Q8WY98 164 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 C11orf40Q8WZ69 217 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 PINX1Q96BK5 328 aaKnown RBP3.28□□□□□ -1.88
CHD7-205ENST00000527825 SLAMF6Q96DU3 332 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 SMIM12Q96EX1 92 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 CYYR1Q96J86 154 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 SLC35E1Q96K37 410 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 ALKBH3Q96Q83 286 aaPredicted RBP3.28□□□□□ -1.88
CHD7-205ENST00000527825 OR5B12Q96R08 314 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 KLHDC3Q9BQ90 382 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 TMEM222Q9H0R3 208 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 MAGT1Q9H0U3 335 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 OR51I2Q9H344 312 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 PNRC2Q9NPJ4 139 aaKnown RBP3.28□□□□□ -1.88
CHD7-205ENST00000527825 TMEM106BQ9NUM4 274 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 ZNF319Q9P2F9 582 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 VPREB3Q9UKI3 123 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 SLC45A2Q9UMX9 530 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 SIGLEC9Q9Y336 463 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 TIMM9Q9Y5J7 89 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 PXMP4Q9Y6I8 212 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 MUC4Q99102 2169 aa3.28□□□□□ -1.88
CHD7-205ENST00000527825 SAA2-SAA4A0A096LPE2 208 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 IGKV1D-43A0A0B4J1Z2 117 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 A0A0U1RQK1 487 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 AQP7P3A6NL99 342 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 CCL25O15444 150 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 TMEM50AO95807 157 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 REG1AP05451 166 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 CD28P10747 220 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 CCNOP22674 350 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 FKBP2P26885 142 aaKnown RBP3.27□□□□□ -1.89
CHD7-205ENST00000527825 IL3RAP26951 378 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 BLVRBP30043 206 aaPredicted RBP3.27□□□□□ -1.89
CHD7-205ENST00000527825 MDH2P40926 338 aaKnown RBP3.27□□□□□ -1.89
CHD7-205ENST00000527825 CDC34P49427 236 aaPredicted RBP3.27□□□□□ -1.89
CHD7-205ENST00000527825 PAX9P55771 341 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 UBE2G2P60604 165 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 PPP1CBP62140 327 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 ARF1P84077 181 aaKnown RBP3.27□□□□□ -1.89
CHD7-205ENST00000527825 RHOGP84095 191 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 RUNX1Q01196 453 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 MEF2BQ02080 365 aaPredicted RBP3.27□□□□□ -1.89
CHD7-205ENST00000527825 OR5I1Q13606 314 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 ENDOGQ14249 297 aaKnown RBP3.27□□□□□ -1.89
CHD7-205ENST00000527825 TMEM41BQ5BJD5 291 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 SLC25A53Q5H9E4 307 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 TCTEX1D4Q5JR98 221 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 OR8G2PQ6IF36 304 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 ZNF880Q6PDB4 577 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 FOXL2NBQ6ZUU3 175 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 Q6ZWC4 215 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 TCF24Q7RTU0 167 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 LINC00346Q8IVM7 164 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 TMEM123Q8N131 208 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 C11orf42Q8N5U0 333 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 OR51T1Q8NGJ9 327 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 OR5C1Q8NGR4 320 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 OR2T10Q8NGZ9 312 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 C8orf46Q8TAG6 207 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 OR51E1Q8TCB6 317 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 PP6455Q8WZ26 134 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 LHX4Q969G2 390 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 TMEM45BQ96B21 275 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 MS4A10Q96PG2 267 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 TECTBQ96PL2 329 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 TP53RKQ96S44 253 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 CITED2Q99967 270 aaPredicted RBP3.27□□□□□ -1.89
CHD7-205ENST00000527825 SMIM7Q9BQ49 75 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 VPS25Q9BRG1 176 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 DCTN5Q9BTE1 182 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 VAMP8Q9BV40 100 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 ST6GALNAC5Q9BVH7 336 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 ELOVL1Q9BW60 279 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 MRPL13Q9BYD1 178 aaKnown RBP3.27□□□□□ -1.89
CHD7-205ENST00000527825 BANF2Q9H503 90 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 MANBALQ9NQG1 85 aa3.27□□□□□ -1.89
CHD7-205ENST00000527825 RPRMQ9NS64 109 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms