RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 UCP1P25874 307 aa7.76□□□□□ -1.17
PRPF40B-204ENST00000527253 ETV6P41212 452 aa7.76□□□□□ -1.17
PRPF40B-204ENST00000527253 MFAP4P55083 255 aa7.76□□□□□ -1.17
PRPF40B-204ENST00000527253 MLANAQ16655 118 aa7.76□□□□□ -1.17
PRPF40B-204ENST00000527253 LHFPL5Q8TAF8 219 aa7.76□□□□□ -1.17
PRPF40B-204ENST00000527253 ZFAND1Q8TCF1 268 aa7.76□□□□□ -1.17
PRPF40B-204ENST00000527253 C15orf40Q8WUR7 153 aa7.76□□□□□ -1.17
PRPF40B-204ENST00000527253 SMIM4Q8WVI0 70 aa7.76□□□□□ -1.17
PRPF40B-204ENST00000527253 RNF2Q99496 336 aa7.76□□□□□ -1.17
PRPF40B-204ENST00000527253 NXF2Q9GZY0 626 aaKnown RBP7.76□□□□□ -1.17
PRPF40B-204ENST00000527253 MRPL36Q9P0J6 103 aaKnown RBP7.76□□□□□ -1.17
PRPF40B-204ENST00000527253 COPZ2Q9P299 210 aa7.76□□□□□ -1.17
PRPF40B-204ENST00000527253 UBQLN2Q9UHD9 624 aa7.76□□□□□ -1.17
PRPF40B-204ENST00000527253 SMPXQ9UHP9 88 aa7.76□□□□□ -1.17
PRPF40B-204ENST00000527253 IGHV7-4-1A0A0J9YVY3 117 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 LCE6AA0A183 80 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 C15orf62A8K5M9 175 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 INS-IGF2F8WCM5 200 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 CHEK1O14757 476 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 CTDSPLO15194 276 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 CDS2O95674 445 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 OR5AC1P0C628 307 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 RNASE2P10153 161 aaKnown RBP7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 TMBIM6P55061 237 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 ERHP84090 104 aaKnown RBP7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 SSBP1Q04837 148 aaKnown RBP7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 TRIM16LQ309B1 348 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 ANKRD55Q3KP44 614 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 ODF3L2Q3SX64 289 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 LILRB2Q8N423 598 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 OR4C16Q8NGL9 310 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 GLYATL2Q8WU03 294 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 RAB2BQ8WUD1 216 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 PINX1Q96BK5 328 aaKnown RBP7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 DIRAS2Q96HU8 199 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 OR10C1Q96KK4 312 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 TXN2Q99757 166 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 SPAG8Q99932 426 aaPredicted RBP7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 SOSTQ9BQB4 213 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 OVOL2Q9BRP0 275 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 GGTLC1Q9BX51 225 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 SLIRPQ9GZT3 109 aaKnown RBP7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 CCDC59Q9P031 241 aaKnown RBP7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 GPR132Q9UNW8 380 aa7.75□□□□□ -1.17
PRPF40B-204ENST00000527253 IGHV3OR16-13A0A075B7E8 117 aa7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 LOC102724200A0A096LPH7 203 aaPredicted RBP7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 IGHV3-74A0A0B4J1X5 117 aa7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 H3BMQ9 156 aa7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 NUPL2O15504 423 aaKnown RBP7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 IFNA17P01571 189 aa7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 APOHP02749 345 aaPredicted RBP7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 AKR1C2P52895 323 aa7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 MRPS10P82664 201 aaKnown RBP7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 IL18Q14116 193 aa7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 MEF2DQ14814 521 aa7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 AARDQ4LEZ3 155 aa7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 FAM90A2PQ658T7 463 aa7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 TOMM20LQ6UXN7 152 aa7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 SELENOHQ8IZQ5 122 aaKnown RBP7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 CCDC71LQ8N9Z2 235 aa7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 GPR146Q96CH1 333 aa7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 RHPN1-AS1Q9BWJ2 59 aa7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 TMEM222Q9H0R3 208 aa7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 FNDC4Q9H6D8 234 aaPredicted RBP7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 PRR13Q9NZ81 148 aa7.74□□□□□ -1.17
PRPF40B-204ENST00000527253 TEX13DA0A0J9YY54 714 aaPredicted RBP7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 DISC1C4P0D8 188 aa7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 GSTZ1O43708 216 aaPredicted RBP7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 GNG7O60262 68 aa7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 YIF1AO95070 293 aa7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 TMEM50AO95807 157 aa7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 AKAIN1P0CW23 69 aa7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 TNFSF8P32971 234 aa7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 RPL5P46777 297 aaKnown RBP7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 RELQ04864 619 aaPredicted RBP7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 SURF2Q15527 256 aaPredicted RBP7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 ZNF124Q15973 351 aa7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 BSXQ3C1V8 233 aa7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 LAMTOR1Q6IAA8 161 aa7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 SLC35G3Q8N808 338 aa7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 TMEM116Q8NCL8 245 aa7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 OR51S1Q8NGJ8 323 aa7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 TMEM230Q96A57 120 aa7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 BCL7BQ9BQE9 202 aa7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 C6orf62Q9GZU0 229 aaPredicted RBP7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 NAA60Q9H7X0 242 aa7.73□□□□□ -1.17
PRPF40B-204ENST00000527253 TRAV14DV4A0A0A6YYC5 116 aa7.72□□□□□ -1.17
PRPF40B-204ENST00000527253 A0A1B0GU03 582 aa7.72□□□□□ -1.17
PRPF40B-204ENST00000527253 ANKRD20A5PA0PJZ0 165 aa7.72□□□□□ -1.17
PRPF40B-204ENST00000527253 CRYM-AS1A6NIL9 109 aa7.72□□□□□ -1.17
PRPF40B-204ENST00000527253 ATG12O94817 140 aa7.72□□□□□ -1.17
PRPF40B-204ENST00000527253 SNCAP37840 140 aa7.72□□□□□ -1.17
PRPF40B-204ENST00000527253 EWSR1Q01844 656 aaKnown RBP eCLIP7.72□□□□□ -1.17
PRPF40B-204ENST00000527253 APRG1Q8IVJ8 170 aa7.72□□□□□ -1.17
PRPF40B-204ENST00000527253 DUSP18Q8NEJ0 188 aa7.72□□□□□ -1.17
PRPF40B-204ENST00000527253 TMEM170AQ8WVE7 144 aa7.72□□□□□ -1.17
PRPF40B-204ENST00000527253 ST8SIA2Q92186 375 aa7.72□□□□□ -1.17
PRPF40B-204ENST00000527253 RRNAD1Q96FB5 475 aaKnown RBP7.72□□□□□ -1.17
PRPF40B-204ENST00000527253 ZFAND3Q9H8U3 227 aa7.72□□□□□ -1.17
PRPF40B-204ENST00000527253 C14orf166Q9Y224 244 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms