RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 COL10A1Q03692 680 aa9.21□□□□□ -0.94
VPS11-202ENST00000526829 UFSP1Q6NVU6 142 aa9.21□□□□□ -0.94
VPS11-202ENST00000526829 AAED1Q7RTV5 226 aa9.21□□□□□ -0.94
VPS11-202ENST00000526829 OR51E1Q8TCB6 317 aa9.21□□□□□ -0.94
VPS11-202ENST00000526829 ABHD14BQ96IU4 210 aa9.21□□□□□ -0.94
VPS11-202ENST00000526829 GPER1Q99527 375 aa9.21□□□□□ -0.94
VPS11-202ENST00000526829 SDF2L1Q9HCN8 221 aa9.21□□□□□ -0.94
VPS11-202ENST00000526829 ODAMA1E959 279 aa9.2□□□□□ -0.94
VPS11-202ENST00000526829 C15orf65H3BRN8 121 aa9.2□□□□□ -0.94
VPS11-202ENST00000526829 J3QR89 54 aa9.2□□□□□ -0.94
VPS11-202ENST00000526829 TRAF3IP2O43734 574 aaPredicted RBP9.2□□□□□ -0.94
VPS11-202ENST00000526829 ZNF728P0DKX0 622 aa9.2□□□□□ -0.94
VPS11-202ENST00000526829 CCL1P22362 96 aa9.2□□□□□ -0.94
VPS11-202ENST00000526829 CTRLP40313 264 aa9.2□□□□□ -0.94
VPS11-202ENST00000526829 DAP3P51398 398 aaKnown RBP9.2□□□□□ -0.94
VPS11-202ENST00000526829 ABCA11PQ4W5N1 156 aa9.2□□□□□ -0.94
VPS11-202ENST00000526829 TMEM78Q5T7P6 136 aa9.2□□□□□ -0.94
VPS11-202ENST00000526829 C11orf71Q6IPW1 123 aa9.2□□□□□ -0.94
VPS11-202ENST00000526829 KIR2DL5BQ8NHK3 375 aa9.2□□□□□ -0.94
VPS11-202ENST00000526829 FAM168AQ92567 244 aa9.2□□□□□ -0.94
VPS11-202ENST00000526829 LHX4Q969G2 390 aa9.2□□□□□ -0.94
VPS11-202ENST00000526829 MSI2Q96DH6 328 aaKnown RBP9.2□□□□□ -0.94
VPS11-202ENST00000526829 SDSLQ96GA7 329 aa9.2□□□□□ -0.94
VPS11-202ENST00000526829 CYYR1Q96J86 154 aa9.2□□□□□ -0.94
VPS11-202ENST00000526829 MS4A10Q96PG2 267 aa9.2□□□□□ -0.94
VPS11-202ENST00000526829 HIST1H2AAQ96QV6 131 aa9.2□□□□□ -0.94
VPS11-202ENST00000526829 SIGLEC9Q9Y336 463 aa9.2□□□□□ -0.94
VPS11-202ENST00000526829 PAM16Q9Y3D7 125 aa9.2□□□□□ -0.94
VPS11-202ENST00000526829 IGKV1D-8A0A087WSZ0 117 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 IGHV2-26A0A0B4J1V2 119 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 PSMB11A5LHX3 300 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 FAM24AA6NFZ4 105 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 IGLC2P0DOY2 106 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 IGLC3P0DOY3 106 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 HINT1P49773 126 aaPredicted RBP9.19□□□□□ -0.94
VPS11-202ENST00000526829 TCTAP57738 103 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 HIST1H1AQ02539 215 aaPredicted RBP9.19□□□□□ -0.94
VPS11-202ENST00000526829 FMODQ06828 376 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 HIST3H3Q16695 136 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 SAXO1Q8IYX7 474 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 KLHDC1Q8N7A1 406 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 RTN4IP1Q8WWV3 396 aaPredicted RBP9.19□□□□□ -0.94
VPS11-202ENST00000526829 ANXA10Q9UJ72 324 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 ALPK2Q86TB3 2170 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 IGHV4-30-2A0A087WSY4 118 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 A0A1W2PRE2 83 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 PFN1P07737 140 aaKnown RBP9.19□□□□□ -0.94
VPS11-202ENST00000526829 MMP9P14780 707 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 B4GALT1P15291 398 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 ZNF133P52736 654 aaPredicted RBP9.19□□□□□ -0.94
VPS11-202ENST00000526829 EFNA4P52798 201 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 MTCP1P56278 107 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 UBE2NP61088 152 aaKnown RBP9.19□□□□□ -0.94
VPS11-202ENST00000526829 SP6Q3SY56 376 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 SIGLEC15Q6ZMC9 328 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 DOK3Q7L591 496 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 WDR31Q8NA23 367 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 OR10S1Q8NGN2 331 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 TMEM170AQ8WVE7 144 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 TMEM158Q8WZ71 300 aa9.19□□□□□ -0.94
VPS11-202ENST00000526829 CUBNO60494 3623 aa9.18□□□□□ -0.94
VPS11-202ENST00000526829 HYPMO75409 117 aa9.18□□□□□ -0.94
VPS11-202ENST00000526829 ORM1P02763 201 aa9.18□□□□□ -0.94
VPS11-202ENST00000526829 HLA-DOBP13765 273 aa9.18□□□□□ -0.94
VPS11-202ENST00000526829 PMCHP20382 165 aa9.18□□□□□ -0.94
VPS11-202ENST00000526829 NTF4P34130 210 aa9.18□□□□□ -0.94
VPS11-202ENST00000526829 FOXG1P55316 489 aaPredicted RBP9.18□□□□□ -0.94
VPS11-202ENST00000526829 RPL8P62917 257 aaKnown RBP9.18□□□□□ -0.94
VPS11-202ENST00000526829 LOXL1Q08397 574 aaPredicted RBP9.18□□□□□ -0.94
VPS11-202ENST00000526829 PDCD1Q15116 288 aa9.18□□□□□ -0.94
VPS11-202ENST00000526829 FAM162BQ5T6X4 162 aa9.18□□□□□ -0.94
VPS11-202ENST00000526829 TSPO2Q5TGU0 170 aa9.18□□□□□ -0.94
VPS11-202ENST00000526829 FOXI2Q6ZQN5 318 aa9.18□□□□□ -0.94
VPS11-202ENST00000526829 DNAJC30Q96LL9 226 aa9.18□□□□□ -0.94
VPS11-202ENST00000526829 UHRF2Q96PU4 802 aa9.18□□□□□ -0.94
VPS11-202ENST00000526829 TMEM106BQ9NUM4 274 aa9.18□□□□□ -0.94
VPS11-202ENST00000526829 NAT8BQ9UHF3 227 aa9.18□□□□□ -0.94
VPS11-202ENST00000526829 IGKV1D-43A0A0B4J1Z2 117 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 MS4A18H0YCH9 400 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 CD33P20138 364 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 KIR2DS4P43632 304 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 RHOBP62745 196 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 MS4A18Q3C1V0 323 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 CENPVQ7Z7K6 275 aaPredicted RBP9.17□□□□□ -0.94
VPS11-202ENST00000526829 TMEM252Q8N6L7 170 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 OR8B12Q8NGG6 310 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 GRAMD2BQ96HH9 432 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 ANAPC13Q9BS18 74 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 IGKV1-9A0A0C4DH69 117 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 CRYAAP02489 173 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 BCL2P10415 239 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 USF1P22415 310 aaPredicted RBP9.17□□□□□ -0.94
VPS11-202ENST00000526829 TSPOP30536 169 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 FAM3BP58499 235 aaPredicted RBP9.17□□□□□ -0.94
VPS11-202ENST00000526829 PSG9Q00887 426 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 PLP2Q04941 152 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 KISS1Q15726 138 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 ACOT6Q3I5F7 207 aaPredicted RBP9.17□□□□□ -0.94
VPS11-202ENST00000526829 ZNF880Q6PDB4 577 aa9.17□□□□□ -0.94
VPS11-202ENST00000526829 DEFB125Q8N687 156 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms