RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 J3QKU1 62 aa16.54■□□□□ 0.24
SQLE-206ENST00000523430 DEFA5Q01523 94 aa16.54■□□□□ 0.24
SQLE-206ENST00000523430 PEA15Q15121 130 aa16.54■□□□□ 0.24
SQLE-206ENST00000523430 ACOT6Q3I5F7 207 aaPredicted RBP16.54■□□□□ 0.24
SQLE-206ENST00000523430 TMEM144Q7Z5S9 345 aa16.54■□□□□ 0.24
SQLE-206ENST00000523430 OR2T6Q8NHC8 308 aa16.54■□□□□ 0.24
SQLE-206ENST00000523430 A0A096LNT2 108 aa16.54■□□□□ 0.24
SQLE-206ENST00000523430 CTXND1A0A1B0GTU2 59 aa16.54■□□□□ 0.24
SQLE-206ENST00000523430 RBFOX3A6NFN3 312 aa16.54■□□□□ 0.24
SQLE-206ENST00000523430 CNIH1O95406 144 aa16.54■□□□□ 0.24
SQLE-206ENST00000523430 IGHV3-48P01763 117 aa16.54■□□□□ 0.24
SQLE-206ENST00000523430 GUCA2BQ16661 112 aa16.54■□□□□ 0.24
SQLE-206ENST00000523430 C10orf91Q5T1B1 145 aa16.54■□□□□ 0.24
SQLE-206ENST00000523430 STPG3Q8N7X2 389 aa16.54■□□□□ 0.24
SQLE-206ENST00000523430 CSMD1Q96PZ7 3565 aa16.54■□□□□ 0.24
SQLE-206ENST00000523430 NCBP2LA6PVI3 153 aaKnown RBP16.53■□□□□ 0.24
SQLE-206ENST00000523430 B2MP61769 119 aa16.53■□□□□ 0.24
SQLE-206ENST00000523430 ATRAIDQ6UW56 229 aa16.53■□□□□ 0.24
SQLE-206ENST00000523430 ACY3Q96HD9 319 aa16.53■□□□□ 0.24
SQLE-206ENST00000523430 FAM103A1Q9BTL3 118 aaKnown RBP16.53■□□□□ 0.24
SQLE-206ENST00000523430 ACTR3CQ9C0K3 210 aaPredicted RBP16.53■□□□□ 0.24
SQLE-206ENST00000523430 SLC39A9Q9NUM3 307 aa16.53■□□□□ 0.24
SQLE-206ENST00000523430 GNG13Q9P2W3 67 aa16.53■□□□□ 0.24
SQLE-206ENST00000523430 CARHSP1Q9Y2V2 147 aaKnown RBP16.53■□□□□ 0.24
SQLE-206ENST00000523430 USP9YO00507 2555 aaPredicted RBP16.53■□□□□ 0.24
SQLE-206ENST00000523430 IGHV1-69DA0A0B4J2H0 117 aa16.52■□□□□ 0.24
SQLE-206ENST00000523430 IGHV1-69P01742 117 aa16.52■□□□□ 0.24
SQLE-206ENST00000523430 GPX4P36969 197 aaPredicted RBP16.52■□□□□ 0.24
SQLE-206ENST00000523430 PVRIGQ6DKI7 326 aa16.52■□□□□ 0.24
SQLE-206ENST00000523430 BRD3OSQ6XYD6 125 aa16.52■□□□□ 0.24
SQLE-206ENST00000523430 CACNG8Q8WXS5 425 aa16.52■□□□□ 0.24
SQLE-206ENST00000523430 RAB24Q969Q5 203 aa16.52■□□□□ 0.24
SQLE-206ENST00000523430 MISP3Q96FF7 219 aa16.52■□□□□ 0.24
SQLE-206ENST00000523430 SLC35E1Q96K37 410 aa16.52■□□□□ 0.24
SQLE-206ENST00000523430 SEC11CQ9BY50 192 aa16.52■□□□□ 0.24
SQLE-206ENST00000523430 KCNIP2Q9NS61 270 aa16.52■□□□□ 0.24
SQLE-206ENST00000523430 MRPL36Q9P0J6 103 aaKnown RBP16.52■□□□□ 0.24
SQLE-206ENST00000523430 DMRT1Q9Y5R6 373 aa16.52■□□□□ 0.24
SQLE-206ENST00000523430 IGHV4-38-2P0DP08 117 aa16.52■□□□□ 0.23
SQLE-206ENST00000523430 CDC34P49427 236 aaPredicted RBP16.52■□□□□ 0.23
SQLE-206ENST00000523430 ICAM4Q14773 271 aa16.52■□□□□ 0.23
SQLE-206ENST00000523430 FXYD3Q14802 87 aa16.52■□□□□ 0.23
SQLE-206ENST00000523430 ABHD5Q8WTS1 349 aa16.52■□□□□ 0.23
SQLE-206ENST00000523430 F11RQ9Y624 299 aaKnown RBP16.52■□□□□ 0.23
SQLE-206ENST00000523430 ZFP92A6NM28 416 aa16.51■□□□□ 0.23
SQLE-206ENST00000523430 B4DSR2 109 aa16.51■□□□□ 0.23
SQLE-206ENST00000523430 SOX15O60248 233 aa16.51■□□□□ 0.23
SQLE-206ENST00000523430 FAM106CPP0CH98 169 aa16.51■□□□□ 0.23
SQLE-206ENST00000523430 PRR20EP86478 221 aa16.51■□□□□ 0.23
SQLE-206ENST00000523430 PRR20CP86479 221 aa16.51■□□□□ 0.23
SQLE-206ENST00000523430 PRR20DP86480 221 aa16.51■□□□□ 0.23
SQLE-206ENST00000523430 PRR20BP86481 221 aa16.51■□□□□ 0.23
SQLE-206ENST00000523430 PRR20AP86496 221 aa16.51■□□□□ 0.23
SQLE-206ENST00000523430 NDPQ00604 133 aa16.51■□□□□ 0.23
SQLE-206ENST00000523430 RAB31Q13636 194 aa16.51■□□□□ 0.23
SQLE-206ENST00000523430 HIST2H2BCQ6DN03 193 aa16.51■□□□□ 0.23
SQLE-206ENST00000523430 OR1P1Q8NH06 330 aa16.51■□□□□ 0.23
SQLE-206ENST00000523430 HIF1ANQ9NWT6 349 aa16.51■□□□□ 0.23
SQLE-206ENST00000523430 SEC14L6B5MCN3 397 aa16.5■□□□□ 0.23
SQLE-206ENST00000523430 CYB5BO43169 146 aa16.5■□□□□ 0.23
SQLE-206ENST00000523430 OR10J1P30954 320 aa16.5■□□□□ 0.23
SQLE-206ENST00000523430 RPL29P47914 159 aaKnown RBP16.5■□□□□ 0.23
SQLE-206ENST00000523430 DEFB113Q30KQ7 82 aa16.5■□□□□ 0.23
SQLE-206ENST00000523430 ZNF506Q5JVG8 444 aa16.5■□□□□ 0.23
SQLE-206ENST00000523430 C7orf69Q9H7B7 122 aa16.5■□□□□ 0.23
SQLE-206ENST00000523430 SLC45A2Q9UMX9 530 aa16.5■□□□□ 0.23
SQLE-206ENST00000523430 LOC102723971A0A1B0GUV8 181 aa16.5■□□□□ 0.23
SQLE-206ENST00000523430 BRS3P32247 399 aa16.5■□□□□ 0.23
SQLE-206ENST00000523430 MAPK1IP1LQ8NDC0 245 aa16.5■□□□□ 0.23
SQLE-206ENST00000523430 RXFP4Q8TDU9 374 aa16.5■□□□□ 0.23
SQLE-206ENST00000523430 TMPRSS5Q9H3S3 457 aa16.5■□□□□ 0.23
SQLE-206ENST00000523430 BEX4Q9NWD9 120 aaPredicted RBP16.5■□□□□ 0.23
SQLE-206ENST00000523430 LINC00869P0C866 280 aa16.49■□□□□ 0.23
SQLE-206ENST00000523430 GATA2P23769 480 aaPredicted RBP16.49■□□□□ 0.23
SQLE-206ENST00000523430 SRSF8Q9BRL6 282 aaKnown RBP16.49■□□□□ 0.23
SQLE-206ENST00000523430 ANKRD17O75179 2603 aaKnown RBP16.48■□□□□ 0.23
SQLE-206ENST00000523430 IGHV3-21A0A0B4J1V1 117 aa16.48■□□□□ 0.23
SQLE-206ENST00000523430 A0A0U1RQK1 487 aa16.48■□□□□ 0.23
SQLE-206ENST00000523430 BCL2P10415 239 aa16.48■□□□□ 0.23
SQLE-206ENST00000523430 CX3CL1P78423 397 aa16.48■□□□□ 0.23
SQLE-206ENST00000523430 Q8N9W7 124 aa16.48■□□□□ 0.23
SQLE-206ENST00000523430 NPIPB3Q92617 1050 aa16.48■□□□□ 0.23
SQLE-206ENST00000523430 ARPC1AQ92747 370 aa16.48■□□□□ 0.23
SQLE-206ENST00000523430 SLC35B3Q9H1N7 401 aa16.48■□□□□ 0.23
SQLE-206ENST00000523430 POLQO75417 2590 aa16.48■□□□□ 0.23
SQLE-206ENST00000523430 ZFHX3Q15911 3703 aa16.48■□□□□ 0.23
SQLE-206ENST00000523430 FBP1P09467 338 aa16.48■□□□□ 0.23
SQLE-206ENST00000523430 RND2P52198 227 aa16.48■□□□□ 0.23
SQLE-206ENST00000523430 SVBPQ8N300 66 aa16.48■□□□□ 0.23
SQLE-206ENST00000523430 SLC25A33Q9BSK2 321 aa16.48■□□□□ 0.23
SQLE-206ENST00000523430 SOX21Q9Y651 276 aaPredicted RBP16.48■□□□□ 0.23
SQLE-206ENST00000523430 CENPEQ02224 2701 aa16.47■□□□□ 0.23
SQLE-206ENST00000523430 CTRB1P17538 263 aa16.47■□□□□ 0.23
SQLE-206ENST00000523430 CTRB2Q6GPI1 263 aa16.47■□□□□ 0.23
SQLE-206ENST00000523430 ZNF562Q6V9R5 426 aa16.47■□□□□ 0.23
SQLE-206ENST00000523430 IQCF2Q8IXL9 164 aa16.47■□□□□ 0.23
SQLE-206ENST00000523430 CELSR1Q9NYQ6 3014 aa16.47■□□□□ 0.23
SQLE-206ENST00000523430 NBPF19A0A087WUL8 3843 aa16.47■□□□□ 0.23
SQLE-206ENST00000523430 IGKV1D-37A0A075B6S9 117 aa16.46■□□□□ 0.23
SQLE-206ENST00000523430 TRAV20A0A0B4J274 112 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms