RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 TRAV1-1A0A0B4J248 108 aa16.02■□□□□ 0.16
TRIO-223ENST00000515710 TRAV40A0A0B4J280 105 aa16.02■□□□□ 0.16
TRIO-223ENST00000515710 NCBP2LA6PVI3 153 aaKnown RBP16.02■□□□□ 0.16
TRIO-223ENST00000515710 AGPAT2O15120 278 aa16.02■□□□□ 0.16
TRIO-223ENST00000515710 ACOT6Q3I5F7 207 aaPredicted RBP16.02■□□□□ 0.16
TRIO-223ENST00000515710 PRSS57Q6UWY2 283 aa16.02■□□□□ 0.16
TRIO-223ENST00000515710 FAM208BQ5VWN6 2430 aa16.02■□□□□ 0.15
TRIO-223ENST00000515710 FBLN7Q53RD9 439 aa16.02■□□□□ 0.15
TRIO-223ENST00000515710 ZNF562Q6V9R5 426 aa16.02■□□□□ 0.15
TRIO-223ENST00000515710 GGTLC1Q9BX51 225 aa16.02■□□□□ 0.15
TRIO-223ENST00000515710 MEGF9Q9H1U4 602 aa16.02■□□□□ 0.15
TRIO-223ENST00000515710 TNCP24821 2201 aa16.01■□□□□ 0.15
TRIO-223ENST00000515710 REG1AP05451 166 aa16.01■□□□□ 0.15
TRIO-223ENST00000515710 AREGP15514 252 aa16.01■□□□□ 0.15
TRIO-223ENST00000515710 GAMTQ14353 236 aa16.01■□□□□ 0.15
TRIO-223ENST00000515710 FXYD3Q14802 87 aa16.01■□□□□ 0.15
TRIO-223ENST00000515710 FAM120AOSQ5T036 256 aa16.01■□□□□ 0.15
TRIO-223ENST00000515710 OR10G4Q8NGN3 311 aa16.01■□□□□ 0.15
TRIO-223ENST00000515710 OR10G9Q8NGN4 311 aa16.01■□□□□ 0.15
TRIO-223ENST00000515710 OR10G7Q8NGN6 311 aa16.01■□□□□ 0.15
TRIO-223ENST00000515710 OR1P1Q8NH06 330 aa16.01■□□□□ 0.15
TRIO-223ENST00000515710 SLC35E1Q96K37 410 aa16.01■□□□□ 0.15
TRIO-223ENST00000515710 PBDC1Q9BVG4 233 aa16.01■□□□□ 0.15
TRIO-223ENST00000515710 TREM1Q9NP99 234 aa16.01■□□□□ 0.15
TRIO-223ENST00000515710 CORTO00230 105 aa16■□□□□ 0.15
TRIO-223ENST00000515710 CYB5BO43169 146 aa16■□□□□ 0.15
TRIO-223ENST00000515710 Q5PR19 223 aa16■□□□□ 0.15
TRIO-223ENST00000515710 RUSC1-AS1Q66K80 236 aa16■□□□□ 0.15
TRIO-223ENST00000515710 ETFRF1Q6IPR1 90 aa16■□□□□ 0.15
TRIO-223ENST00000515710 SLC16A13Q7RTY0 426 aa16■□□□□ 0.15
TRIO-223ENST00000515710 SSMEM1Q8WWF3 244 aa16■□□□□ 0.15
TRIO-223ENST00000515710 RCC1LQ96I51 464 aaKnown RBP16■□□□□ 0.15
TRIO-223ENST00000515710 F11RQ9Y624 299 aaKnown RBP16■□□□□ 0.15
TRIO-223ENST00000515710 IGHV3OR16-10A0A075B7F0 116 aa16■□□□□ 0.15
TRIO-223ENST00000515710 J3QLI3 93 aa16■□□□□ 0.15
TRIO-223ENST00000515710 CD5P06127 495 aa16■□□□□ 0.15
TRIO-223ENST00000515710 RPL29P47914 159 aaKnown RBP16■□□□□ 0.15
TRIO-223ENST00000515710 SRSF3P84103 164 aaKnown RBP16■□□□□ 0.15
TRIO-223ENST00000515710 PEA15Q15121 130 aa16■□□□□ 0.15
TRIO-223ENST00000515710 ZNF726P1Q15940 193 aa16■□□□□ 0.15
TRIO-223ENST00000515710 RPP25LQ8N5L8 163 aaKnown RBP16■□□□□ 0.15
TRIO-223ENST00000515710 SEC11CQ9BY50 192 aa16■□□□□ 0.15
TRIO-223ENST00000515710 ACTR3CQ9C0K3 210 aaPredicted RBP16■□□□□ 0.15
TRIO-223ENST00000515710 SLC39A9Q9NUM3 307 aa16■□□□□ 0.15
TRIO-223ENST00000515710 GATCO43716 136 aaKnown RBP15.99■□□□□ 0.15
TRIO-223ENST00000515710 MLANAQ16655 118 aa15.99■□□□□ 0.15
TRIO-223ENST00000515710 GUK1Q16774 197 aa15.99■□□□□ 0.15
TRIO-223ENST00000515710 ABHD5Q8WTS1 349 aa15.99■□□□□ 0.15
TRIO-223ENST00000515710 TCEAL7Q9BRU2 100 aa15.99■□□□□ 0.15
TRIO-223ENST00000515710 PXMP4Q9Y6I8 212 aa15.99■□□□□ 0.15
TRIO-223ENST00000515710 RNF223E7ERA6 249 aa15.98■□□□□ 0.15
TRIO-223ENST00000515710 IGHV4-38-2P0DP08 117 aa15.98■□□□□ 0.15
TRIO-223ENST00000515710 ADCYAP1P18509 176 aa15.98■□□□□ 0.15
TRIO-223ENST00000515710 CCL20P78556 96 aa15.98■□□□□ 0.15
TRIO-223ENST00000515710 FAM209BQ5JX69 171 aa15.98■□□□□ 0.15
TRIO-223ENST00000515710 Q8N9W7 124 aa15.98■□□□□ 0.15
TRIO-223ENST00000515710 CTXND1A0A1B0GTU2 59 aa15.98■□□□□ 0.15
TRIO-223ENST00000515710 A0A1B0GV50 99 aa15.98■□□□□ 0.15
TRIO-223ENST00000515710 S100A6P06703 90 aa15.98■□□□□ 0.15
TRIO-223ENST00000515710 CX3CL1P78423 397 aa15.98■□□□□ 0.15
TRIO-223ENST00000515710 BRD3OSQ6XYD6 125 aa15.98■□□□□ 0.15
TRIO-223ENST00000515710 OR1L6Q8NGR2 347 aa15.98■□□□□ 0.15
TRIO-223ENST00000515710 SCRT1Q9BWW7 348 aa15.98■□□□□ 0.15
TRIO-223ENST00000515710 FNDC4Q9H6D8 234 aaPredicted RBP15.98■□□□□ 0.15
TRIO-223ENST00000515710 TMEM231Q9H6L2 316 aa15.98■□□□□ 0.15
TRIO-223ENST00000515710 FABP1P07148 127 aa15.97■□□□□ 0.15
TRIO-223ENST00000515710 MIC13Q5XKP0 118 aa15.97■□□□□ 0.15
TRIO-223ENST00000515710 LCN15Q6UWW0 184 aa15.97■□□□□ 0.15
TRIO-223ENST00000515710 RASL11BQ9BPW5 248 aa15.97■□□□□ 0.15
TRIO-223ENST00000515710 EIF5A2Q9GZV4 153 aaKnown RBP15.97■□□□□ 0.15
TRIO-223ENST00000515710 SMDT1Q9H4I9 107 aa15.97■□□□□ 0.15
TRIO-223ENST00000515710 SLC45A2Q9UMX9 530 aa15.97■□□□□ 0.15
TRIO-223ENST00000515710 FAM96BQ9Y3D0 163 aa15.97■□□□□ 0.15
TRIO-223ENST00000515710 LRRK2Q5S007 2527 aa15.96■□□□□ 0.15
TRIO-223ENST00000515710 A0A0U1RQK1 487 aa15.96■□□□□ 0.15
TRIO-223ENST00000515710 LINC00587B1AMM8 73 aa15.96■□□□□ 0.15
TRIO-223ENST00000515710 CRYGCP07315 174 aa15.96■□□□□ 0.15
TRIO-223ENST00000515710 FOSL1P15407 271 aa15.96■□□□□ 0.15
TRIO-223ENST00000515710 MFAP2P55001 183 aa15.96■□□□□ 0.15
TRIO-223ENST00000515710 ZNF600Q6ZNG1 722 aa15.96■□□□□ 0.15
TRIO-223ENST00000515710 OR2T6Q8NHC8 308 aa15.96■□□□□ 0.15
TRIO-223ENST00000515710 ARPC1AQ92747 370 aa15.96■□□□□ 0.15
TRIO-223ENST00000515710 MISP3Q96FF7 219 aa15.96■□□□□ 0.15
TRIO-223ENST00000515710 MAP1LC3B2A6NCE7 125 aa15.96■□□□□ 0.14
TRIO-223ENST00000515710 EIF3GO75821 320 aaKnown RBP eCLIP15.96■□□□□ 0.14
TRIO-223ENST00000515710 YIF1AO95070 293 aa15.96■□□□□ 0.14
TRIO-223ENST00000515710 HLA-DRB1P01911 266 aa15.96■□□□□ 0.14
TRIO-223ENST00000515710 APELAP0DMC3 54 aa15.96■□□□□ 0.14
TRIO-223ENST00000515710 PRR20EP86478 221 aa15.96■□□□□ 0.14
TRIO-223ENST00000515710 PRR20CP86479 221 aa15.96■□□□□ 0.14
TRIO-223ENST00000515710 PRR20DP86480 221 aa15.96■□□□□ 0.14
TRIO-223ENST00000515710 PRR20BP86481 221 aa15.96■□□□□ 0.14
TRIO-223ENST00000515710 PRR20AP86496 221 aa15.96■□□□□ 0.14
TRIO-223ENST00000515710 SSX7Q7RTT5 188 aa15.96■□□□□ 0.14
TRIO-223ENST00000515710 MAP1LC3BQ9GZQ8 125 aa15.96■□□□□ 0.14
TRIO-223ENST00000515710 WNT10AQ9GZT5 417 aa15.96■□□□□ 0.14
TRIO-223ENST00000515710 ABCA2Q9BZC7 2435 aa15.95■□□□□ 0.14
TRIO-223ENST00000515710 RBFOX3A6NFN3 312 aa15.95■□□□□ 0.14
TRIO-223ENST00000515710 SEC14L6B5MCN3 397 aa15.95■□□□□ 0.14
TRIO-223ENST00000515710 UBE2CO00762 179 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms