RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 SPANXB1Q9NS25 103 aaPredicted RBP3.64□□□□□ -1.83
CAST-243ENST00000515160 FIS1Q9Y3D6 152 aa3.64□□□□□ -1.83
CAST-243ENST00000515160 DNAJC15Q9Y5T4 150 aa3.64□□□□□ -1.83
CAST-243ENST00000515160 VPS13DQ5THJ4 4388 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 IGLV4-69A0A075B6H9 119 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 LOC102724200A0A096LPH7 203 aaPredicted RBP3.63□□□□□ -1.83
CAST-243ENST00000515160 IGHV3-49A0A0A0MS15 119 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 TMED7-TICAM2A0A0A6YYA0 188 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 TRAV8-2A0A0B4J237 113 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 PGPA6NDG6 321 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 CLDN24A6NM45 220 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 CEACAM18A8MTB9 384 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 LHBP01229 141 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 M6PRP20645 277 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 ALDH3A1P30838 453 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 MPV17P39210 176 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 ZNF133P52736 654 aaPredicted RBP3.63□□□□□ -1.83
CAST-243ENST00000515160 GLO1Q04760 184 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 C2orf83Q53S99 150 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 COQ5Q5HYK3 327 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 UBE2NLQ5JXB2 153 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 GRINAQ7Z429 371 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 PRNTQ86SH4 94 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 C4orf33Q8N1A6 199 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 CYB561D1Q8N8Q1 229 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 OR5T1Q8NG75 326 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 TWIST2Q8WVJ9 160 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 RBP7Q96R05 134 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 OR7D2Q96RA2 312 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 PAIP2Q9BPZ3 127 aaKnown RBP3.63□□□□□ -1.83
CAST-243ENST00000515160 SLC35A3Q9Y2D2 325 aa3.63□□□□□ -1.83
CAST-243ENST00000515160 FAT2Q9NYQ8 4349 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 SMIM23A6NLE4 172 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 H3BP45 60 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 PDCD6O75340 191 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 VAMP5O95183 116 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 CPSF4O95639 269 aaKnown RBP3.62□□□□□ -1.83
CAST-243ENST00000515160 IGHV1-69P01742 117 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 OPN1SWP03999 348 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 SHBGP04278 402 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 OR12D1P0DN82 309 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 SPNP16150 400 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 AKR1C4P17516 323 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 OPRK1P41145 380 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 KLF3P57682 345 aaPredicted RBP3.62□□□□□ -1.83
CAST-243ENST00000515160 RAB25P57735 213 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 MAGOHP61326 146 aaKnown RBP3.62□□□□□ -1.83
CAST-243ENST00000515160 MEF2CQ06413 473 aaPredicted RBP3.62□□□□□ -1.83
CAST-243ENST00000515160 FUT5Q11128 374 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 DNAL1Q4LDG9 190 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 ZFAND6Q6FIF0 208 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 Q6ZR03 302 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 LRRC34Q8IZ02 419 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 ORMDL3Q8N138 153 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 OR8J2Q8NGG1 315 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 CIRBP-AS1Q8TBR5 109 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 SLC35G5Q96KT7 338 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 CHCHD7Q9BUK0 85 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 DPY30Q9C005 99 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 TMEM106BQ9NUM4 274 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 OR5V1Q9UGF6 321 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 VPREB3Q9UKI3 123 aa3.62□□□□□ -1.83
CAST-243ENST00000515160 FAM183AA6NL82 134 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 CD300LBA8K4G0 201 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 CCRL2O00421 344 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 FFAR1O14842 300 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 BIRC5O15392 142 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 RBFOX2O43251 390 aaKnown RBP eCLIP3.61□□□□□ -1.83
CAST-243ENST00000515160 KRT75O95678 551 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 HLA-DQB1P01920 261 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 C1QCP02747 245 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 MAS1P04201 325 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 BPGMP07738 259 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 COX5BP10606 129 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 CD79AP11912 226 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 GRPRP30550 384 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 RCVRNP35243 200 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 TGFBR2P37173 567 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 IDH2P48735 452 aaKnown RBP3.61□□□□□ -1.83
CAST-243ENST00000515160 POLR2HP52434 150 aaKnown RBP3.61□□□□□ -1.83
CAST-243ENST00000515160 CLDN12P56749 244 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 COPZ1P61923 177 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 HBA1P69905 142 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 HPCAP84074 193 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 SSX1Q16384 188 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 TBC1D28Q2M2D7 210 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 FAM162BQ5T6X4 162 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 ZFP1Q6P2D0 407 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 HMGN2P46Q86SG4 172 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 NDUFA11Q86Y39 141 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 PDPNQ86YL7 162 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 ZNF101Q8IZC7 436 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 OR4S1Q8NGB4 309 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 OR5D16Q8NGK9 328 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 ROPN1LQ96C74 230 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 C1orf50Q9BV19 199 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 OR51B6Q9H340 312 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 OR51I1Q9H343 314 aa3.61□□□□□ -1.83
CAST-243ENST00000515160 CACYBPQ9HB71 228 aaKnown RBP3.61□□□□□ -1.83
CAST-243ENST00000515160 TAS2R5Q9NYW4 299 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms