RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 CA7P43166 264 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 NKX2-1P43699 371 aaPredicted RBP6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 TAS2R46P59540 309 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 SYT8Q8NBV8 401 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 OR1L4Q8NGR5 311 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 C2orf50Q96LR7 162 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 HES7Q9BYE0 225 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 DKK4Q9UBT3 224 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 R4GN57 208 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 A0A087X0K7 114 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 LOC102723971A0A1B0GUV8 181 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 A0A1W2PPM0 123 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 KIAA1324LA8MWY0 1029 aaPredicted RBP6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 LHX2P50458 406 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 XGP55808 180 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 MTCP1P56278 107 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 IGFBP7Q16270 282 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 SP6Q3SY56 376 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 CENPVQ7Z7K6 275 aaPredicted RBP6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 RAB37Q96AX2 223 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 SGK494Q96LW2 274 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 SMIM7Q9BQ49 75 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 SCNM1Q9BWG6 230 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 ARRDC1-AS1Q9H2J1 176 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 MED13Q9UHV7 2174 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 FNDC10F2Z333 226 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 KLRD1Q13241 179 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 Q56UQ5 140 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 TMEM178AQ8NBL3 297 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 OR5AN1Q8NGI8 311 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 Q8TCH9 128 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 IL36GQ9NZH8 169 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 V9GYY9 64 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 IGKV3D-15A0A087WSY6 115 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 ZNF503-AS2A6NEH8 195 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 PRSS29PA6NIE9 313 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 ZFP92A6NM28 416 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 LINC00869P0C866 280 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 AADACP22760 399 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 PPP1CBP62140 327 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 ETDBQ3ZM63 59 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 TSPO2Q5TGU0 170 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 ZNF808Q8N4W9 903 aaPredicted RBP6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 GNPNAT1Q96EK6 184 aaPredicted RBP6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 ZNF257Q9Y2Q1 563 aa6.2□□□□□ -1.42
PDLIM5-219ENST00000514743 BDP1A6H8Y1 2624 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 DUXBA0A1W2PPF3 345 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 F2Z2F3 143 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 J3KT08 172 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 HBE1P02100 147 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 GNG5P63218 68 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 RNPS1Q15287 305 aaKnown RBP6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 PIGYQ3MUY2 71 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 RASL11AQ6T310 242 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 FAM159AQ6UWV7 190 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 TCF23Q7RTU1 214 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 SH2D6Q7Z4S9 175 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 C3orf56Q8N813 242 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 OR10G7Q8NGN6 311 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 C1QTNF5Q9BXJ0 243 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 FGF23Q9GZV9 251 aaPredicted RBP6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 KCNS2Q9ULS6 477 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 LINC00312Q9Y6C7 94 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 MOSP00540 346 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 IGHV3-9P01782 118 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 LINC00694P0DN24 101 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 CD59P13987 128 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 ZNF708P17019 499 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 SPINK2P20155 84 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 IER3P46695 156 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 NDUFV3P56181 108 aaKnown RBP6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 FXYD4P59646 89 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 DIAPH2-AS1Q14236 149 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 ESPL1Q14674 2120 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 SPATA12Q7Z6I5 190 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 CDIP1Q9H305 208 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 C1orf123Q9NWV4 160 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 ARL2-SNX15V9GYD0 113 aa6.19□□□□□ -1.42
PDLIM5-219ENST00000514743 A0A096LPE4 126 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 A0A1W2PPZ6 126 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 OOEPA6NGQ2 149 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 CA2P00918 260 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 CRYGBP07316 175 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 TLE1Q04724 770 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 SPEM2Q0P670 501 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 WFDC2Q14508 124 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 SCGB3A2Q96PL1 93 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 POLDIP2Q9Y2S7 368 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 FAM186AA6NE01 2351 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 ZNF407Q9C0G0 2248 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 CRYM-AS1A6NIL9 109 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 CDX4O14627 284 aaPredicted RBP6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 SS18L1O75177 396 aaPredicted RBP6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 SP9P0CG40 484 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 GPR183P32249 361 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 Q6AWC8 147 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 H2BFWTQ7Z2G1 175 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 ARPC1AQ92747 370 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 BORCS8Q96FH0 119 aa6.18□□□□□ -1.42
PDLIM5-219ENST00000514743 NEIL1Q96FI4 390 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms