RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 SCN8AQ9UQD0 1980 aa10.99□□□□□ -0.65
TCOF1-213ENST00000514442 SMAGPQ0VAQ4 97 aa10.99□□□□□ -0.65
TCOF1-213ENST00000514442 SPACA3Q8IXA5 215 aa10.99□□□□□ -0.65
TCOF1-213ENST00000514442 C1orf162Q8NEQ5 155 aaPredicted RBP10.99□□□□□ -0.65
TCOF1-213ENST00000514442 RNASE8Q8TDE3 154 aaKnown RBP10.99□□□□□ -0.65
TCOF1-213ENST00000514442 SNAI2O43623 268 aa10.98□□□□□ -0.65
TCOF1-213ENST00000514442 PLA2G2EQ9NZK7 142 aa10.98□□□□□ -0.65
TCOF1-213ENST00000514442 SS18L1O75177 396 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-213ENST00000514442 SEC11AP67812 179 aa10.98□□□□□ -0.65
TCOF1-213ENST00000514442 MPV17L2Q567V2 206 aa10.98□□□□□ -0.65
TCOF1-213ENST00000514442 BMPERQ8N8U9 685 aa10.98□□□□□ -0.65
TCOF1-213ENST00000514442 F5H697 171 aa10.98□□□□□ -0.65
TCOF1-213ENST00000514442 IGLC2P0DOY2 106 aa10.98□□□□□ -0.65
TCOF1-213ENST00000514442 IGLC3P0DOY3 106 aa10.98□□□□□ -0.65
TCOF1-213ENST00000514442 ZNF841Q6ZN19 808 aa10.98□□□□□ -0.65
TCOF1-213ENST00000514442 STPG4Q8N801 248 aa10.98□□□□□ -0.65
TCOF1-213ENST00000514442 NOTCH4Q99466 2003 aa10.98□□□□□ -0.65
TCOF1-213ENST00000514442 LOC105371242A0A075B767 164 aa10.98□□□□□ -0.65
TCOF1-213ENST00000514442 PAX2Q02962 417 aa10.98□□□□□ -0.65
TCOF1-213ENST00000514442 OR9G1Q8NH87 305 aa10.98□□□□□ -0.65
TCOF1-213ENST00000514442 TMEM186Q96B77 213 aa10.98□□□□□ -0.65
TCOF1-213ENST00000514442 C5orf30Q96GV9 206 aa10.98□□□□□ -0.65
TCOF1-213ENST00000514442 HIGD1AQ9Y241 93 aa10.98□□□□□ -0.65
TCOF1-213ENST00000514442 FAM181BA6NEQ2 426 aa10.97□□□□□ -0.65
TCOF1-213ENST00000514442 CCL25O15444 150 aa10.97□□□□□ -0.65
TCOF1-213ENST00000514442 PRB3Q04118 309 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-213ENST00000514442 PAXXQ9BUH6 204 aa10.97□□□□□ -0.65
TCOF1-213ENST00000514442 FBXL7Q9UJT9 491 aa10.97□□□□□ -0.65
TCOF1-213ENST00000514442 CACNA1GO43497 2377 aa10.97□□□□□ -0.65
TCOF1-213ENST00000514442 CEACAM8P31997 349 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-213ENST00000514442 ANKRD39Q53RE8 183 aa10.97□□□□□ -0.65
TCOF1-213ENST00000514442 RPP25LQ8N5L8 163 aaKnown RBP10.97□□□□□ -0.65
TCOF1-213ENST00000514442 RABAC1Q9UI14 185 aa10.97□□□□□ -0.65
TCOF1-213ENST00000514442 TMSB15BA0A087X1C1 80 aa10.97□□□□□ -0.65
TCOF1-213ENST00000514442 HTN1P15515 57 aa10.97□□□□□ -0.65
TCOF1-213ENST00000514442 HBBP68871 147 aa10.97□□□□□ -0.65
TCOF1-213ENST00000514442 LY6EQ16553 131 aa10.97□□□□□ -0.65
TCOF1-213ENST00000514442 OR2K2Q8NGT1 345 aa10.97□□□□□ -0.65
TCOF1-213ENST00000514442 PLPPR1Q8TBJ4 325 aa10.97□□□□□ -0.65
TCOF1-213ENST00000514442 F11RQ9Y624 299 aaKnown RBP10.97□□□□□ -0.65
TCOF1-213ENST00000514442 Q0VG73 95 aa10.97□□□□□ -0.65
TCOF1-213ENST00000514442 TCF19Q9Y242 345 aa10.97□□□□□ -0.65
TCOF1-213ENST00000514442 IGKV1D-13A0A0B4J2D9 117 aa10.96□□□□□ -0.65
TCOF1-213ENST00000514442 FAM106CPP0CH98 169 aa10.96□□□□□ -0.65
TCOF1-213ENST00000514442 IGKV1-13P0DP09 117 aa10.96□□□□□ -0.65
TCOF1-213ENST00000514442 HSPE1P61604 102 aaKnown RBP10.96□□□□□ -0.65
TCOF1-213ENST00000514442 LY6DQ14210 128 aa10.96□□□□□ -0.65
TCOF1-213ENST00000514442 NMSQ5H8A3 153 aa10.96□□□□□ -0.65
TCOF1-213ENST00000514442 UFC1Q9Y3C8 167 aa10.96□□□□□ -0.65
TCOF1-213ENST00000514442 IQCF6A8MYZ5 107 aa10.96□□□□□ -0.65
TCOF1-213ENST00000514442 PDLIM4P50479 330 aa10.96□□□□□ -0.65
TCOF1-213ENST00000514442 RNF144BQ7Z419 303 aa10.96□□□□□ -0.65
TCOF1-213ENST00000514442 PGLYRP4Q96LB8 373 aa10.96□□□□□ -0.65
TCOF1-213ENST00000514442 SRCAPQ6ZRS2 3230 aa10.96□□□□□ -0.66
TCOF1-213ENST00000514442 IFNL4K9M1U5 179 aa10.96□□□□□ -0.66
TCOF1-213ENST00000514442 MMP23AO75900 390 aa10.96□□□□□ -0.66
TCOF1-213ENST00000514442 CA1P00915 261 aaPredicted RBP10.96□□□□□ -0.66
TCOF1-213ENST00000514442 CLEC7AQ9BXN2 247 aa10.96□□□□□ -0.66
TCOF1-213ENST00000514442 POLEQ07864 2286 aa10.96□□□□□ -0.66
TCOF1-213ENST00000514442 ORM1P02763 201 aa10.96□□□□□ -0.66
TCOF1-213ENST00000514442 PIMREGQ9BSJ6 248 aa10.96□□□□□ -0.66
TCOF1-213ENST00000514442 OSTCQ9NRP0 149 aa10.95□□□□□ -0.66
TCOF1-213ENST00000514442 ZNF257Q9Y2Q1 563 aa10.95□□□□□ -0.66
TCOF1-213ENST00000514442 C5orf63A6NC05 138 aa10.95□□□□□ -0.66
TCOF1-213ENST00000514442 STPG3Q8N7X2 389 aa10.95□□□□□ -0.66
TCOF1-213ENST00000514442 NABP1Q96AH0 204 aa10.95□□□□□ -0.66
TCOF1-213ENST00000514442 FOXA3P55318 350 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-213ENST00000514442 ANAPC1Q9H1A4 1944 aa10.95□□□□□ -0.66
TCOF1-213ENST00000514442 PLXNA4Q9HCM2 1894 aa10.95□□□□□ -0.66
TCOF1-213ENST00000514442 LOC389332A0A1B0GUA5 103 aa10.95□□□□□ -0.66
TCOF1-213ENST00000514442 C19orf67A6NJJ6 358 aa10.95□□□□□ -0.66
TCOF1-213ENST00000514442 SH2D7A6NKC9 451 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-213ENST00000514442 C17orf98A8MV24 154 aa10.95□□□□□ -0.66
TCOF1-213ENST00000514442 PF4V1P10720 104 aa10.95□□□□□ -0.66
TCOF1-213ENST00000514442 LCN12Q6JVE5 192 aa10.95□□□□□ -0.66
TCOF1-213ENST00000514442 CCL19Q99731 98 aa10.95□□□□□ -0.66
TCOF1-213ENST00000514442 RNASE7Q9H1E1 156 aaKnown RBP10.95□□□□□ -0.66
TCOF1-213ENST00000514442 CD5LO43866 347 aa10.94□□□□□ -0.66
TCOF1-213ENST00000514442 LOXL3P58215 753 aa10.94□□□□□ -0.66
TCOF1-213ENST00000514442 CKS1BP61024 79 aa10.94□□□□□ -0.66
TCOF1-213ENST00000514442 PEAR1Q5VY43 1037 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-213ENST00000514442 TMEM238C9JI98 176 aa10.94□□□□□ -0.66
TCOF1-213ENST00000514442 CGAP01215 116 aa10.94□□□□□ -0.66
TCOF1-213ENST00000514442 PRNTQ86SH4 94 aa10.94□□□□□ -0.66
TCOF1-213ENST00000514442 STXBP6Q8NFX7 210 aa10.94□□□□□ -0.66
TCOF1-213ENST00000514442 IGHV1-18A0A0C4DH31 117 aa10.94□□□□□ -0.66
TCOF1-213ENST00000514442 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.94□□□□□ -0.66
TCOF1-213ENST00000514442 C5orf17Q8NAS9 161 aa10.94□□□□□ -0.66
TCOF1-213ENST00000514442 OR4C13Q8NGP0 309 aa10.94□□□□□ -0.66
TCOF1-213ENST00000514442 MS4A6AQ9H2W1 248 aa10.94□□□□□ -0.66
TCOF1-213ENST00000514442 H3BTX0 84 aa10.94□□□□□ -0.66
TCOF1-213ENST00000514442 CRYGSP22914 178 aa10.94□□□□□ -0.66
TCOF1-213ENST00000514442 CA7P43166 264 aa10.94□□□□□ -0.66
TCOF1-213ENST00000514442 TBR1Q16650 682 aa10.94□□□□□ -0.66
TCOF1-213ENST00000514442 FRMPD3Q5JV73 1810 aa10.94□□□□□ -0.66
TCOF1-213ENST00000514442 MUC21A0A0G2JKD1 596 aa10.93□□□□□ -0.66
TCOF1-213ENST00000514442 MUC21A0A140T8X8 626 aa10.93□□□□□ -0.66
TCOF1-213ENST00000514442 Q1RN00 199 aa10.93□□□□□ -0.66
TCOF1-213ENST00000514442 MUC21Q5SSG8 566 aa10.93□□□□□ -0.66
TCOF1-213ENST00000514442 OR10W1Q8NGF6 305 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms