RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 Q6ZT83 130 aa7.96□□□□□ -1.14
VCAN-210ENST00000513960 NIT1Q86X76 327 aa7.96□□□□□ -1.14
VCAN-210ENST00000513960 ZBTB34Q8NCN2 500 aa7.96□□□□□ -1.14
VCAN-210ENST00000513960 KLF14Q8TD94 323 aaPredicted RBP7.96□□□□□ -1.14
VCAN-210ENST00000513960 NABP2Q9BQ15 211 aa7.96□□□□□ -1.14
VCAN-210ENST00000513960 CELSR3Q9NYQ7 3312 aa7.96□□□□□ -1.14
VCAN-210ENST00000513960 FAM181BA6NEQ2 426 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 IQCF6A8MYZ5 107 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 K7ERU9 68 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 OR10J3Q5JRS4 329 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 CST9LQ9H4G1 147 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 TMEM167BQ9NRX6 74 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 AGFG2O95081 481 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 TAS2R45P59539 299 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 SLC25A34Q6PIV7 304 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 LHFPL4Q7Z7J7 247 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 C5orf30Q96GV9 206 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 SFXN3Q9BWM7 321 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 MEGF9Q9H1U4 602 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 LOC105371242A0A075B767 164 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 H3BTX0 84 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 LINC00869P0C866 280 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 C18orf32Q8TCD1 76 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 RAB37Q96AX2 223 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 SAP30LQ9HAJ7 183 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 DUSP13Q9UII6 198 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 METRNQ9UJH8 293 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 ATRXP46100 2492 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 ROS1P08922 2347 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 A0A087X0K7 114 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 IGHV1-69-2A0A0G2JMI3 117 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 MPV17P39210 176 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 SELENOVP59797 346 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 S100A7AQ86SG5 101 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 FDCSPQ8NFU4 85 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 CORO2AQ92828 525 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 TMEM70Q9BUB7 260 aa7.95□□□□□ -1.14
VCAN-210ENST00000513960 GSX1Q9H4S2 264 aaPredicted RBP7.95□□□□□ -1.14
VCAN-210ENST00000513960 MBNL3Q9NUK0 354 aaKnown RBP7.95□□□□□ -1.14
VCAN-210ENST00000513960 IGHV3OR15-7A0A075B7D8 119 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 TRGV10A0A0A0MS01 117 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 CHEK1O14757 476 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 FOXF2Q12947 444 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 OCIAD2Q56VL3 154 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 FAM168AQ92567 244 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 SARAFQ96BY9 339 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 DAZAP1Q96EP5 407 aaKnown RBP7.94□□□□□ -1.14
VCAN-210ENST00000513960 TRAV9-1A0A075B6T8 112 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 TRAV5A0A0B4J249 113 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 FBLL1A6NHQ2 334 aaKnown RBP7.94□□□□□ -1.14
VCAN-210ENST00000513960 LEPROTL1O95214 131 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 CTRLP40313 264 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 KIR3DL3Q8N743 410 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 DEFB108BQ8NET1 73 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 RAB1CQ92928 201 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 CXXC4Q9H2H0 198 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 TRAV17A0A0B4J275 112 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 GAGE10A6NGK3 116 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 PPIAL4DF5H284 164 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 CORTO00230 105 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 ZNF718Q3SXZ3 478 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 EBLN2Q6P2I7 272 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 TCF24Q7RTU0 167 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 NUDT10Q8NFP7 164 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 TMEM191AQ9H0A3 160 aa7.94□□□□□ -1.14
VCAN-210ENST00000513960 ZNF138P52744 262 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 COX19Q49B96 90 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 WFDC8Q8IUA0 241 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 CHRDL1Q9BU40 450 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 FNDC4Q9H6D8 234 aaPredicted RBP7.93□□□□□ -1.14
VCAN-210ENST00000513960 MRPS16Q9Y3D3 137 aaKnown RBP7.93□□□□□ -1.14
VCAN-210ENST00000513960 BDP1A6H8Y1 2624 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 TRAV30A0A087WSZ9 112 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 IGHV2-26A0A0B4J1V2 119 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 IGHG3P01860 377 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 MLANAQ16655 118 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 VWA1Q6PCB0 445 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 Q8N976 141 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 NUDT11Q96G61 164 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 IGHV2-70DA0A0C4DH43 119 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 IZUMO1RA6ND01 250 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 COX7A2P2O60397 106 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 SLC25A5P05141 298 aaKnown RBP7.93□□□□□ -1.14
VCAN-210ENST00000513960 GNG5P63218 68 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 RBMXL3Q8N7X1 1067 aaKnown RBP7.93□□□□□ -1.14
VCAN-210ENST00000513960 DEFB124Q8NES8 71 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 OR52E5Q8NH55 327 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 LRRC29Q8WV35 223 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 PGLYRP4Q96LB8 373 aa7.93□□□□□ -1.14
VCAN-210ENST00000513960 CACNA1HO95180 2353 aa7.92□□□□□ -1.14
VCAN-210ENST00000513960 CEP250Q9BV73 2442 aa7.92□□□□□ -1.14
VCAN-210ENST00000513960 HIGD1CA8MV81 97 aa7.92□□□□□ -1.14
VCAN-210ENST00000513960 PYYP10082 97 aa7.92□□□□□ -1.14
VCAN-210ENST00000513960 PPOXP50336 477 aa7.92□□□□□ -1.14
VCAN-210ENST00000513960 SLC35E4Q6ICL7 350 aa7.92□□□□□ -1.14
VCAN-210ENST00000513960 HILPDAQ9Y5L2 63 aa7.92□□□□□ -1.14
VCAN-210ENST00000513960 EP300Q09472 2414 aaPredicted RBP7.92□□□□□ -1.14
VCAN-210ENST00000513960 IGLC7A0M8Q6 106 aa7.92□□□□□ -1.14
VCAN-210ENST00000513960 C9JCJ5 164 aa7.92□□□□□ -1.14
VCAN-210ENST00000513960 GFRA3O60609 400 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms