RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 OR4D10Q8NGI6 311 aa9.28□□□□□ -0.92
VEGFA-216ENST00000512683 PHLDA1Q8WV24 401 aaPredicted RBP9.28□□□□□ -0.92
VEGFA-216ENST00000512683 AP3S1Q92572 193 aa9.28□□□□□ -0.92
VEGFA-216ENST00000512683 OR10C1Q96KK4 312 aa9.28□□□□□ -0.92
VEGFA-216ENST00000512683 CHRDL1Q9BU40 450 aa9.28□□□□□ -0.92
VEGFA-216ENST00000512683 C20orf24Q9BUV8 137 aa9.28□□□□□ -0.92
VEGFA-216ENST00000512683 EXTL2Q9UBQ6 330 aa9.28□□□□□ -0.92
VEGFA-216ENST00000512683 CHEK1O14757 476 aa9.27□□□□□ -0.93
VEGFA-216ENST00000512683 IFNA4P05014 189 aa9.27□□□□□ -0.93
VEGFA-216ENST00000512683 CTSDP07339 412 aaPredicted RBP9.27□□□□□ -0.93
VEGFA-216ENST00000512683 PI3P19957 117 aa9.27□□□□□ -0.93
VEGFA-216ENST00000512683 MFAP4P55083 255 aa9.27□□□□□ -0.93
VEGFA-216ENST00000512683 RND3P61587 244 aa9.27□□□□□ -0.93
VEGFA-216ENST00000512683 EWSR1Q01844 656 aaKnown RBP eCLIP9.27□□□□□ -0.934e-7■■■□□ 19.2
VEGFA-216ENST00000512683 SPCS2Q15005 226 aa9.27□□□□□ -0.93
VEGFA-216ENST00000512683 RNASE10Q5GAN6 216 aaKnown RBP9.27□□□□□ -0.93
VEGFA-216ENST00000512683 H2BFWTQ7Z2G1 175 aa9.27□□□□□ -0.93
VEGFA-216ENST00000512683 TMEM116Q8NCL8 245 aa9.27□□□□□ -0.93
VEGFA-216ENST00000512683 MRGPRFQ96AM1 343 aa9.27□□□□□ -0.93
VEGFA-216ENST00000512683 RHPN1-AS1Q9BWJ2 59 aa9.27□□□□□ -0.93
VEGFA-216ENST00000512683 MRPS26Q9BYN8 205 aaKnown RBP9.27□□□□□ -0.93
VEGFA-216ENST00000512683 UBQLN2Q9UHD9 624 aa9.27□□□□□ -0.93
VEGFA-216ENST00000512683 TRAV14DV4A0A0A6YYC5 116 aa9.26□□□□□ -0.93
VEGFA-216ENST00000512683 IGHV7-4-1A0A0J9YVY3 117 aa9.26□□□□□ -0.93
VEGFA-216ENST00000512683 CTDSP2O14595 271 aa9.26□□□□□ -0.93
VEGFA-216ENST00000512683 DFFBO76075 338 aa9.26□□□□□ -0.93
VEGFA-216ENST00000512683 IGKV1-5P01602 117 aa9.26□□□□□ -0.93
VEGFA-216ENST00000512683 CD74P04233 296 aa9.26□□□□□ -0.93
VEGFA-216ENST00000512683 P0C879 139 aa9.26□□□□□ -0.93
VEGFA-216ENST00000512683 TBPP20226 339 aa9.26□□□□□ -0.93
VEGFA-216ENST00000512683 IZUMO4Q1ZYL8 232 aa9.26□□□□□ -0.93
VEGFA-216ENST00000512683 Q56UQ5 140 aa9.26□□□□□ -0.93
VEGFA-216ENST00000512683 ARRDC1Q8N5I2 433 aa9.26□□□□□ -0.93
VEGFA-216ENST00000512683 ZNF486Q96H40 463 aaPredicted RBP9.26□□□□□ -0.93
VEGFA-216ENST00000512683 TP53RKQ96S44 253 aa9.26□□□□□ -0.93
VEGFA-216ENST00000512683 RARRES2Q99969 163 aa9.26□□□□□ -0.93
VEGFA-216ENST00000512683 C11orf68Q9H3H3 251 aaKnown RBP9.26□□□□□ -0.93
VEGFA-216ENST00000512683 TRAV2A0A0B4J234 112 aa9.25□□□□□ -0.93
VEGFA-216ENST00000512683 I3L2K1 104 aa9.25□□□□□ -0.93
VEGFA-216ENST00000512683 PGAM2P15259 253 aa9.25□□□□□ -0.93
VEGFA-216ENST00000512683 RPL35AP18077 110 aaKnown RBP9.25□□□□□ -0.93
VEGFA-216ENST00000512683 PIGPP57054 158 aa9.25□□□□□ -0.93
VEGFA-216ENST00000512683 HSPE1P61604 102 aaKnown RBP9.25□□□□□ -0.93
VEGFA-216ENST00000512683 PRCDQ00LT1 54 aa9.25□□□□□ -0.93
VEGFA-216ENST00000512683 FAM90A2PQ658T7 463 aa9.25□□□□□ -0.93
VEGFA-216ENST00000512683 GPR141Q7Z602 305 aa9.25□□□□□ -0.93
VEGFA-216ENST00000512683 TMEM229BQ8NBD8 167 aa9.25□□□□□ -0.93
VEGFA-216ENST00000512683 ZNF114Q8NC26 417 aa9.25□□□□□ -0.93
VEGFA-216ENST00000512683 DUSP18Q8NEJ0 188 aa9.25□□□□□ -0.93
VEGFA-216ENST00000512683 OR4A16Q8NH70 328 aa9.25□□□□□ -0.93
VEGFA-216ENST00000512683 TERB2Q8NHR7 220 aa9.25□□□□□ -0.93
VEGFA-216ENST00000512683 C11orf45Q8TAV5 145 aa9.25□□□□□ -0.93
VEGFA-216ENST00000512683 RNF2Q99496 336 aa9.25□□□□□ -0.93
VEGFA-216ENST00000512683 GINS3Q9BRX5 216 aa9.25□□□□□ -0.93
VEGFA-216ENST00000512683 NXF2Q9GZY0 626 aaKnown RBP9.25□□□□□ -0.93
VEGFA-216ENST00000512683 IGHV3OR16-8A0A075B7F1 116 aa9.24□□□□□ -0.93
VEGFA-216ENST00000512683 A0A0B4J293 547 aa9.24□□□□□ -0.93
VEGFA-216ENST00000512683 GABARAPH6UMI1 98 aa9.24□□□□□ -0.93
VEGFA-216ENST00000512683 YIF1AO95070 293 aa9.24□□□□□ -0.93
VEGFA-216ENST00000512683 NPBWR1P48145 328 aa9.24□□□□□ -0.93
VEGFA-216ENST00000512683 PPP5CP53041 499 aa9.24□□□□□ -0.93
VEGFA-216ENST00000512683 ERHP84090 104 aaKnown RBP9.24□□□□□ -0.93
VEGFA-216ENST00000512683 TMEM41BQ5BJD5 291 aa9.24□□□□□ -0.93
VEGFA-216ENST00000512683 UBAC2Q8NBM4 344 aa9.24□□□□□ -0.93
VEGFA-216ENST00000512683 C15orf40Q8WUR7 153 aa9.24□□□□□ -0.93
VEGFA-216ENST00000512683 C3orf85A0A1B0GTC6 90 aa9.23□□□□□ -0.93
VEGFA-216ENST00000512683 C11orf94C9JXX5 98 aa9.23□□□□□ -0.93
VEGFA-216ENST00000512683 INS-IGF2F8WCM5 200 aa9.23□□□□□ -0.93
VEGFA-216ENST00000512683 RGS5O15539 181 aa9.23□□□□□ -0.93
VEGFA-216ENST00000512683 RAB3DO95716 219 aa9.23□□□□□ -0.93
VEGFA-216ENST00000512683 IGHV3-48P01763 117 aa9.23□□□□□ -0.93
VEGFA-216ENST00000512683 TAS2R19P59542 299 aa9.23□□□□□ -0.93
VEGFA-216ENST00000512683 RBMS2Q15434 407 aaKnown RBP9.23□□□□□ -0.93
VEGFA-216ENST00000512683 SP6Q3SY56 376 aa9.23□□□□□ -0.93
VEGFA-216ENST00000512683 STEAP1BQ6NZ63 245 aa9.23□□□□□ -0.93
VEGFA-216ENST00000512683 OR13C8Q8NGS7 320 aa9.23□□□□□ -0.93
VEGFA-216ENST00000512683 OR11H2Q8NH07 326 aa9.23□□□□□ -0.93
VEGFA-216ENST00000512683 MARCH1Q8TCQ1 289 aa9.23□□□□□ -0.93
VEGFA-216ENST00000512683 DYNC2LI1Q8TCX1 351 aa9.23□□□□□ -0.93
VEGFA-216ENST00000512683 MISP3Q96FF7 219 aa9.23□□□□□ -0.93
VEGFA-216ENST00000512683 HRH4Q9H3N8 390 aa9.23□□□□□ -0.93
VEGFA-216ENST00000512683 TMEM231Q9H6L2 316 aa9.23□□□□□ -0.93
VEGFA-216ENST00000512683 A0A0G2JRQ6 117 aa9.22□□□□□ -0.93
VEGFA-216ENST00000512683 ZNF207O43670 478 aaKnown RBP9.22□□□□□ -0.93
VEGFA-216ENST00000512683 GNG7O60262 68 aa9.22□□□□□ -0.93
VEGFA-216ENST00000512683 MT-CO2P00403 227 aa9.22□□□□□ -0.93
VEGFA-216ENST00000512683 UCP1P25874 307 aa9.22□□□□□ -0.93
VEGFA-216ENST00000512683 SSBP1Q04837 148 aaKnown RBP9.22□□□□□ -0.93
VEGFA-216ENST00000512683 TMEM187Q14656 261 aa9.22□□□□□ -0.93
VEGFA-216ENST00000512683 SPINK9Q5DT21 86 aa9.22□□□□□ -0.93
VEGFA-216ENST00000512683 FAAP20Q6NZ36 180 aa9.22□□□□□ -0.93
VEGFA-216ENST00000512683 CLVS1Q8IUQ0 354 aaPredicted RBP9.22□□□□□ -0.93
VEGFA-216ENST00000512683 APRG1Q8IVJ8 170 aa9.22□□□□□ -0.93
VEGFA-216ENST00000512683 RPP25LQ8N5L8 163 aaKnown RBP9.22□□□□□ -0.93
VEGFA-216ENST00000512683 ZFAND1Q8TCF1 268 aa9.22□□□□□ -0.93
VEGFA-216ENST00000512683 C2CD4CQ8TF44 421 aa9.22□□□□□ -0.93
VEGFA-216ENST00000512683 SMIM4Q8WVI0 70 aa9.22□□□□□ -0.93
VEGFA-216ENST00000512683 VSIRQ9H7M9 311 aa9.22□□□□□ -0.93
VEGFA-216ENST00000512683 KMT2AQ03164 3969 aa9.21□□□□□ -0.93
VEGFA-216ENST00000512683 A0A1W2PS18 150 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms